Gene Symbol | PRP8 |
Entrez Gene ID | 856570 |
Full Name | U4/U6-U5 snRNP complex subunit PRP8 |
Synonyms | DBF3,DNA39,RNA8,SLT21,USA2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » PRP8 cDNA ORF clone
Gene Symbol | PRP8 |
Entrez Gene ID | 856570 |
Full Name | U4/U6-U5 snRNP complex subunit PRP8 |
Synonyms | DBF3,DNA39,RNA8,SLT21,USA2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001179296.1 | NP_012035.1 | U4/U6-U5 snRNP complex subunit PRP8 |
Rattus norvegicus (Norway rat) | Prpf8 | NP_001178519.1 |
Neurospora crassa | NCU07832 | XP_962953.1 |
Arabidopsis thaliana (thale cress) | SUS2 | NP_178124.2 |
PRPF8 | XP_001117328.1 | |
Canis lupus familiaris (dog) | PRPF8 | XP_854384.1 |
Drosophila melanogaster (fruit fly) | Prp8 | NP_610735.1 |
Caenorhabditis elegans (roundworm) | prp-8 | NP_498785.1 |
Schizosaccharomyces pombe (fission yeast) | spp42 | NP_593861.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05244 | XP_003712798.1 |
Oryza sativa (rice) | Os06g0167000 | NP_001056917.1 |
Homo sapiens (human) | PRPF8 | NP_006436.3 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006885 | XP_308873.2 |
Kluyveromyces lactis | KLLA0A05280g | XP_451233.1 |
Eremothecium gossypii | AGOS_ABR207W | NP_983156.2 |
Bos taurus (cattle) | PRPF8 | NP_001099108.1 |
Mus musculus (house mouse) | Prpf8 | NP_619600.2 |
Arabidopsis thaliana (thale cress) | AT4G38780 | NP_195589.2 |
Xenopus tropicalis (tropical clawed frog) | prpf8 | XP_002936105.1 |
Gallus gallus (chicken) | PRPF8 | XP_415805.2 |
Danio rerio (zebrafish) | prpf8 | NP_957270.2 |
Saccharomyces cerevisiae (baker's yeast) | PRP8 | NP_012035.1 |
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII.
Johnston M, Andrews S, Brinkman R, Cooper J, Ding H, Dover J, Du Z, Favello A, Fulton L, Gattung S
Science (New York, N.Y.)265(5181)2077-82(1994 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Upon step 1 catalysis, Cwc25 contacts with the branch-site region, and enhanced crosslinks of Prp8 and Prp45 with nucleotides surrounding the branch-site were observed.
Title: Dynamic Contacts of U2, RES, Cwc25, Prp8 and Prp45 Proteins with the Pre-mRNA Branch-Site and 3' Splice Site during Catalytic Activation and Step 1 Catalysis in Yeast Spliceosomes.
The Prp8 suppressor partially corrected both the early assembly and later activation defects of prp28-1, supporting a role for this U5 snRNP protein in both the ATP-independent and ATP-dependent functions of Prp28.
Title: An unanticipated early function of DEAD-box ATPase Prp28 during commitment to splicing is modulated by U5 snRNP protein Prp8.
We propose that the U5 snRNA IL1 is a platform for protein binding and is required for , Brr2 and Snu114 association with the U5 snRNA to form the U5 snRNP.
Title: The U5 snRNA internal loop 1 is a platform for Brr2, Snu114 and Prp8 protein binding during U5 snRNP assembly.
Together, these data establish that PRP8 is a metalloprotein that promotes exon ligation within the spliceosome.
Title: A conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Results report the structure of the Saccharomyces cerevisiae tri-snRNP, and show that U4/U6 snRNP forms a domain termed the arm, while a separate head domain adjacent to the arm harbors Brr2, and Prp8 and the GTPase Snu114 are located centrally.
Title: Localization of Prp8, Brr2, Snu114 and U4/U6 proteins in the yeast tri-snRNP by electron microscopy.
The following PRP8 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PRP8 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi05362 | |
Clone ID Related Accession (Same CDS sequence) | NM_001179296.1 | |
Accession Version | NM_001179296.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 7242bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | U4/U6-U5 snRNP complex subunit PRP8 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001140). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Veresion :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGAGTGGAC TACCGCCCCC ACCTCCTGGT TTTGAAGAGG ACAGCGACTT AGCACTTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_012035.1 |
CDS | 1..7242 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001179296.1 |
1 | ATGAGTGGAC TACCGCCCCC ACCTCCTGGT TTTGAAGAGG ACAGCGACTT AGCACTTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Life with 6000 genes. |
Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII. |