CG5800 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG5800
Entrez Gene ID	32742
Full Name	CG5800 gene product from transcript CG5800-RA
Synonyms	DmRH14,Dmel\CG5800,cg5800
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: X Map Location: 16B10-16B10

mRNA and Protein(s)

mRNA	Protein	Name
NM_133002.2	NP_573230.1	uncharacterized protein

Pathways from BioSystems

Homologies

Pan troglodytes (chimpanzee)	DDX10	XP_001141618.1
Canis lupus familiaris (dog)	DDX10	XP_536583.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP001057	XP_001230842.3
Mus musculus (house mouse)	Ddx10	NP_084212.2
Drosophila melanogaster (fruit fly)	CG5800	NP_573230.1
Caenorhabditis elegans (roundworm)	Y23H5B.6	NP_490989.1
Danio rerio (zebrafish)	ddx10	XP_001922220.1
Homo sapiens (human)	DDX10	NP_004389.2
Rattus norvegicus (Norway rat)	Ddx10	NP_001100290.1
Xenopus tropicalis (tropical clawed frog)	ddx10	NP_001096151.1
Bos taurus (cattle)	DDX10	NP_001070349.1
Gallus gallus (chicken)	DDX10	NP_001073193.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG5800 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG5800 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa01922	NM_133002.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG5800), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG5800 ( NM_133002.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_573230.1 Drosophila melanogaster uncharacterized protein (CG5800), mRNA.

Price & Availability↑

CloneID	OFa01922
Clone ID Related Accession (Same CDS sequence)	NM_133002.2
Accession Version	NM_133002.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2481bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NC_004354). On Jan 16, 2013 this sequence version replaced NM_133002.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGCGCC AGAAACCCAA GGGACCCGGC AAACCGGGTT CGCGTTTCAA GCCGGGATCC 
GGCACGTTCA AAGGAGCTGG TGGTGGCCGG AAAAGCGGCG ACAACAGCCA GAAGCGTCCG 
CGCCAGGAGA TCAACAAGTC GCGACTGGCC GCCACCGAAG CGGAGATCCA GGACCTCAAG 
ACCAAATACG CAGAGATCGA TGCTACTGCC ATTAAGAAGT TCGCCCAGTT TCCGCTGTCC 
AAGAAGACCC AAAAGGCACT GGCGGAGTCC AAATTCGTGC ATCCCACGCA GGTGCAGCGG 
GACAGCATTG GACCCGCACT GCAGGGCAAG GATGTGCTGG GCGCGGCCAT CACAGGCAGT 
GGCAAGACAC TGGCCTTTCT CATACCCGTT CTGGAGCATC TGTTCATGAA CAAATGGTCG 
CGCACCGATG GCGTTGGCGC TATCATCATC TCGCCCACCC GCGAGCTAGC CTACCAGATC 
TTCGAGACCC TAAAGAAGGT GGGAAAGCAC CACGACTTCT CCGCCGGCCT CATCATCGGA 
GGCAAGAACC TGAAGTTCGA GCGCACTCGC ATGGACCAGT GCAACATACT GATCTGCACA 
CCCGGAAGGC TGCTGCAGCA CATGGACGAG AATCCTCTCT TTAATACGAG CACCATGGAG 
ATGTTGGTCC TGGATGAAGC CGATCGCTGT TTGGATATGG GTTTCCAGAA GACCCTGAAT 
TCAATCATAG AAAATTTCCC ACCAGTGCGT CAAACGCTGC TATTCTCGGC CACGCAAACG 
AATACGGTGC AGGATTTGGC GAGGCTTAAT CTAAAGGATC CGGTCTACGT AGGCTACGGA 
GGAGCGACGC CAAGAGAAGA GCCCAGCGCC AGCACGAAGA AGACTCCGAA CACAGCTGTC 
TTGGCAGTTC CTGAGCTTTT GCAGCAGAGT TATGTGGTGT TGAACCTGGA GGACAAGATC 
ACCATGCTGT GGTCGTTCAT CAAGAACCAT TTGAAGCAGA AGATCATTGT GTTCGTGGCC 
AGTTGCAAGC AGGCCAAGTA CCTGTACGAG ATATTTTGTA AACTGCGGCC GGGTAGCCCG 
CTGCTGGCTC TCTATGGAAC GCTCCATCAG GATCGTCGCA TTGCCATCTA CGAGGATTTC 
CTTCGCAAGA GCCACGTCGT TATGTTCTCC ACTGATGTGG CATCGCGCGG TCTGGACTTT 
CCTGCCGTCA ATTGGGTGGT GCAGTTGGAC TGCCCGGAGG ATGTTTCACA GTACATTCAT 
CGAGCTGGAC GATCTGCGCG GAACAAGACA CGCGGCGAGT GTCTGTTGGT TTTGACACCC 
AGCGAGGAGG AGTACATGAT TAGTGCGCTT AAGGAACAGT TGAATATCGA CATTCGTTGT 
GTGCAAATCG ATCCCAAGAA GCTCTTCTCT CCGCGCGTCA AGATCGAGGC CTTTCTGGCC 
CAATTTCCCG AACTGAGGGC AACCGCCCAG CGCGCCTTCC TCTCCTACAT AAAATCCGTG 
TTCCTGATGC GCAACAAGCG CTTGTTTAAT GTGTTCAGCC TGGATCTAGA TGCATTTGCC 
CAATCGCTCG GCTTGGCGGT TACGCCGCGT GTTCCCTTCC TCGAAAAATT CCTGTGGCGC 
CAGAAGCAGC TACAGCAGCA GAAAGAACAG GGTGATAACG CAAAATCGAT CAATCCATTG 
CTCAGCAAGC TGACCAAGCA GCAGAGCTTT GGCGGCGGTG ACGAGGATGA AGAGAACAGT 
GATGACGAAG ACTTTATCAA GGTGAAACGT AAGGATCACG ATGTGGAAGG AGAGCCAGTG 
AAGCTGGACG AAGAGGATGA CACTGAGAAT GAGGCAGAGG CCCCACTTGT GGTACCCAAG 
CGCGAGAAGC TGGTAACCAA GGCCTCGCTG GCCAAGAAGG CGCTGAAGAA GAATCTGCAG 
GTCAACTCCA AGCTGAAGTT CGATGACGAG GGCGAAACTA TGGCAGATGA TCGCAGCCAA 
ATGAAGGCCT TGAGTGCCAG GCAAAGAACA GTGAACCAAG ACGACGACGA TGGAGGCATT 
AATCTAGTGC TGTCCAAGGC GCTACTCACC GAGGAGGATC AATATGACAA GCAGCGATTC 
CGGGAGCTGG TCAAGAAGCG CCACAAACTG CAGCGCGAGA AGCTGCGGAA AAAGGCGGAG 
GAGGCCAAGG GCAGCGACGA CGAAGAGGAG CAACAGGACG ATGACAATGC GGACGATGCT 
GGCAGTGAGA GTGACCATTC AGTGGACCTC TCCTGGCTGC CGGATCCCGA TAAGGTTTAC 
AAAAATAAGC CTAACGCTTC GGATCGAAAT GAATCCAAAT CAGAGTCCAG CGATGCATCC 
GATGACGAGA AAGCTGACGA CAGCGACGGC GACGACGACG ACGTCTCCGA CGATGAACCC 
GCCTACAAAA AGTCCAAGCT GACGAACAAG ATGACTCTAA TGGACACGGA GGCCATAGCG 
GCCAGTCTTT TGGGTAGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_573230.1
CDS	88..2568
Translation	MQRQKPKGPGKPGSRFKPGSGTFKGAGGGRKSGDNSQKRPRQEINKSRLAATEAEIQDLKTKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQCNILICTPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSLGLAVTPRVPFLEKFLWRQKQLQQQKEQGDNAKSINPLLSKLTKQQSFGGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEEDDTENEAEAPLVVPKREKLVTKASLAKKALKKNLQVNSKLKFDDEGETMADDRSQMKALSARQRTVNQDDDDGGINLVLSKALLTEEDQYDKQRFRELVKKRHKLQREKLRKKAEEAKGSDDEEEQQDDDNADDAGSESDHSVDLSWLPDPDKVYKNKPNASDRNESKSESSDASDDEKADDSDGDDDDVSDDEPAYKKSKLTNKMTLMDTEAIAASLLGS

Target ORF information:

RefSeq Version	NM_133002.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG5800), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_133002.2

ORF Insert Sequence:

ATGCAGCGCC AGAAACCCAA GGGACCCGGC AAACCGGGTT CGCGTTTCAA GCCGGGATCC 
GGCACGTTCA AAGGAGCTGG TGGTGGCCGG AAAAGCGGCG ACAACAGCCA GAAGCGTCCG 
CGCCAGGAGA TCAACAAGTC GCGACTGGCC GCCACCGAAG CGGAGATCCA GGACCTCAAG 
ACCAAATACG CAGAGATCGA TGCTACTGCC ATTAAGAAGT TCGCCCAGTT TCCGCTGTCC 
AAGAAGACCC AAAAGGCACT GGCGGAGTCC AAATTCGTGC ATCCCACGCA GGTGCAGCGG 
GACAGCATTG GACCCGCACT GCAGGGCAAG GATGTGCTGG GCGCGGCCAT CACAGGCAGT 
GGCAAGACAC TGGCCTTTCT CATACCCGTT CTGGAGCATC TGTTCATGAA CAAATGGTCG 
CGCACCGATG GCGTTGGCGC TATCATCATC TCGCCCACCC GCGAGCTAGC CTACCAGATC 
TTCGAGACCC TAAAGAAGGT GGGAAAGCAC CACGACTTCT CCGCCGGCCT CATCATCGGA 
GGCAAGAACC TGAAGTTCGA GCGCACTCGC ATGGACCAGT GCAACATACT GATCTGCACA 
CCCGGAAGGC TGCTGCAGCA CATGGACGAG AATCCTCTCT TTAATACGAG CACCATGGAG 
ATGTTGGTCC TGGATGAAGC CGATCGCTGT TTGGATATGG GTTTCCAGAA GACCCTGAAT 
TCAATCATAG AAAATTTCCC ACCAGTGCGT CAAACGCTGC TATTCTCGGC CACGCAAACG 
AATACGGTGC AGGATTTGGC GAGGCTTAAT CTAAAGGATC CGGTCTACGT AGGCTACGGA 
GGAGCGACGC CAAGAGAAGA GCCCAGCGCC AGCACGAAGA AGACTCCGAA CACAGCTGTC 
TTGGCAGTTC CTGAGCTTTT GCAGCAGAGT TATGTGGTGT TGAACCTGGA GGACAAGATC 
ACCATGCTGT GGTCGTTCAT CAAGAACCAT TTGAAGCAGA AGATCATTGT GTTCGTGGCC 
AGTTGCAAGC AGGCCAAGTA CCTGTACGAG ATATTTTGTA AACTGCGGCC GGGTAGCCCG 
CTGCTGGCTC TCTATGGAAC GCTCCATCAG GATCGTCGCA TTGCCATCTA CGAGGATTTC 
CTTCGCAAGA GCCACGTCGT TATGTTCTCC ACTGATGTGG CATCGCGCGG TCTGGACTTT 
CCTGCCGTCA ATTGGGTGGT GCAGTTGGAC TGCCCGGAGG ATGTTTCACA GTACATTCAT 
CGAGCTGGAC GATCTGCGCG GAACAAGACA CGCGGCGAGT GTCTGTTGGT TTTGACACCC 
AGCGAGGAGG AGTACATGAT TAGTGCGCTT AAGGAACAGT TGAATATCGA CATTCGTTGT 
GTGCAAATCG ATCCCAAGAA GCTCTTCTCT CCGCGCGTCA AGATCGAGGC CTTTCTGGCC 
CAATTTCCCG AACTGAGGGC AACCGCCCAG CGCGCCTTCC TCTCCTACAT AAAATCCGTG 
TTCCTGATGC GCAACAAGCG CTTGTTTAAT GTGTTCAGCC TGGATCTAGA TGCATTTGCC 
CAATCGCTCG GCTTGGCGGT TACGCCGCGT GTTCCCTTCC TCGAAAAATT CCTGTGGCGC 
CAGAAGCAGC TACAGCAGCA GAAAGAACAG GGTGATAACG CAAAATCGAT CAATCCATTG 
CTCAGCAAGC TGACCAAGCA GCAGAGCTTT GGCGGCGGTG ACGAGGATGA AGAGAACAGT 
GATGACGAAG ACTTTATCAA GGTGAAACGT AAGGATCACG ATGTGGAAGG AGAGCCAGTG 
AAGCTGGACG AAGAGGATGA CACTGAGAAT GAGGCAGAGG CCCCACTTGT GGTACCCAAG 
CGCGAGAAGC TGGTAACCAA GGCCTCGCTG GCCAAGAAGG CGCTGAAGAA GAATCTGCAG 
GTCAACTCCA AGCTGAAGTT CGATGACGAG GGCGAAACTA TGGCAGATGA TCGCAGCCAA 
ATGAAGGCCT TGAGTGCCAG GCAAAGAACA GTGAACCAAG ACGACGACGA TGGAGGCATT 
AATCTAGTGC TGTCCAAGGC GCTACTCACC GAGGAGGATC AATATGACAA GCAGCGATTC 
CGGGAGCTGG TCAAGAAGCG CCACAAACTG CAGCGCGAGA AGCTGCGGAA AAAGGCGGAG 
GAGGCCAAGG GCAGCGACGA CGAAGAGGAG CAACAGGACG ATGACAATGC GGACGATGCT 
GGCAGTGAGA GTGACCATTC AGTGGACCTC TCCTGGCTGC CGGATCCCGA TAAGGTTTAC 
AAAAATAAGC CTAACGCTTC GGATCGAAAT GAATCCAAAT CAGAGTCCAG CGATGCATCC 
GATGACGAGA AAGCTGACGA CAGCGACGGC GACGACGACG ACGTCTCCGA CGATGAACCC 
GCCTACAAAA AGTCCAAGCT GACGAACAAG ATGACTCTAA TGGACACGGA GGCCATAGCG 
GCCAGTCTTT TGGGTAGCTA A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG5800 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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