AT4G17616 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	AT4G17616
Entrez Gene ID	6240541
Full Name	Pentatricopeptide repeat (PPR) superfamily protein
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001125530.2	NP_001119002.1	Pentatricopeptide repeat (PPR) superfamily protein

Pathways from BioSystems

Homologies

Arabidopsis thaliana (thale cress)	AT4G17616	NP_001119002.1
Oryza sativa (rice)	Os07g0495300	NP_001059695.2

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT4G17616 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G17616 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb29237	NM_001125530.2 Latest version!	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G17616), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

AT4G17616 ( NM_001125530.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001119002.1 Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G17616), mRNA.

Price & Availability↑

CloneID	OAb29237
Clone ID Related Accession (Same CDS sequence)	NM_001125530.2
Accession Version	NM_001125530.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2025bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Pentatricopeptide repeat (PPR) superfamily protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_001125530.1.

ATGTTTAGGA AACGGAACTT AGTTCTAGAA TCATTTCGTC GATTCGATAG CGGTAACGTA 
GAAACCCTAA TTTCATGGGT CTTGTGTAGT CGCACCTCAA AGCCGTCTCT GTTCTGTACT 
AGTGTTAAAC CTGCTAGATT AAACTGGGAA GTTTCTTCTC AAGTAATTCT CAAGAAGAAG 
CTAGAAACAG CTCTTAAAGA TCACCGTGTA GATGATGCTT GGGACGTGTT TAAAGATTTC 
AAACGCCTCT ATGGATTTCC AGAGAGTGTA ATCATGAACA GATTTGTTAC TGTGTTGTCT 
TACTCGTCTG ATGCTGGTTG GCTTTGTAAG GCTAGTGATC TTACTCGTTT GGCTTTGAAG 
CAAAATCCAG GTATGTTAAG TGGCGATGTG TTAACAAAGT TGTCGTTGTC TCTAGCGAGA 
GCTCAGATGG TTGAATCTGC TTGTAGTATC CTTCGAATAA TGCTGGAGAA GGGATATGTT 
CTAACCTCAG ATGTATTGAG GCTTGTTGTG ATGCATATGG TGAAAACAGA GATTGGGACT 
TGCTTAGCTT CGAATTATTT GGTTCAGGTT TGTGATCGTT TTGTGGAGTT CAATGTGGGG 
AAAAGAAATA GCAGCCCCGG GAATGTTGTG AAGCCTGATA CGGTCTTGTT TAATCTTGTA 
CTTGGTTCTT GTGTGAGATT TGGTTTCTCT CTCAAAGGCC AAGAACTTAT CGAGCTAATG 
GCAAAAGTTG ATGTCGTTGC GGATGCGTAC TCGATTGTGA TCATGTCTTG TATTTATGAA 
ATGAATGGTA TGCGGGATGA GTTGAGGAAG TTCAAGGAGC ATATTGGTCA GGTACCCCCT 
CAACTTCTTG GTCACTATCA GCATTTTTTT GATAATTTGT TAAGCCTGGA GTTCAAATTT 
GATGATATCG GTTCTGCGGG TCGGCTTGCC TTAGATATGT GCAAGAGTAA GGTCTTGGTT 
TCAGTTGAGA ATCTTGGATT TGATTCTGAA AAGCCTCGGG TTTTGCCTGT TGGGTCACAC 
CATATCAGAT CTGGGTTAAA GATCCATATT TCACCCAAGC TTTTGCAGAG AGATTCATCT 
CTCGGAGTGG ATACTGAAGC AACATTTGTT AATTATTCCA ATTCCAAGCT TGGTATCACA 
AACAAGACTC TTGCCAAGTT AGTATATGGG TACAAGAGAC ATGATAATCT CCCTGAGCTA 
TCAAAGCTTT TGTTTTCGCT GGGTGGATCC AGGTTATGTG CTGATGTCAT TGATGCTTGT 
GTTGCTATTG GTTGGTTAGA AGCTGCTCAT GATATTCTTG ACGACATGAA TTCTGCTGGC 
TATCCCATGG AATTGGCCAC ATATAGGATG GTCTTGTCAG GTTATTACAA GAGCAAGATG 
TTGAGGAATG CAGAAGTTCT TCTGAAACAA ATGACGAAAG CCGGCCTAAT TACAGATCCA 
TCAAATGAAA TTGTGGTTTC ACCAGAAACT GAAGAGAAAG ACAGTGAAAA CACAGAGCTC 
AGGGATCTCT TGGTTCAGGA AATCAATGCA GGAAAACAAA TGAAAGCTCC AAGTATGCTC 
TATGAGCTAA ACTCGTCCCT CTACTACTTC TGCAAAGCTA AAATGCAAGG AGATGCCTTA 
ATAACCTACC GGAAAATCCC CAAGATGAAA ATCCCACCAA CTGTCCAAAG CTTTTGGATC 
TTGATCGACA TGTACTCATC TCTTGGCATG TACCGGGAGA TCACAATCGT GTGGGGAGAT 
ATCAAGAGGA ACATTGCAAG CAAAAACTTA AAGACAACAC AAGATCTGTT AGAGAAGCTT 
GTGGTGAACT TTCTCAGAGG CGGGTATTTT GAGAGAGTAA TGGAGCTTAT CAGTTATATG 
AAGGAGAATG ATATGTATAA TGATCTAACC ATGTATAAGA ATGAGTATCT TAAGCTTCAT 
AAGAATCTAT ACAGAACCTT GAAAGCATCA GATGCTGTAA CAGAGGCTCA AGCTCAGAGG 
CTTGAGCATG TCAAAACCTT CAGGAAACTA GTTGGTATAG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001119002.1
CDS	269..2293
Translation	MFRKRNLVLESFRRFDSGNVETLISWVLCSRTSKPSLFCTSVKPARLNWEVSSQVILKKKLETALKDHRVDDAWDVFKDFKRLYGFPESVIMNRFVTVLSYSSDAGWLCKASDLTRLALKQNPGMLSGDVLTKLSLSLARAQMVESACSILRIMLEKGYVLTSDVLRLVVMHMVKTEIGTCLASNYLVQVCDRFVEFNVGKRNSSPGNVVKPDTVLFNLVLGSCVRFGFSLKGQELIELMAKVDVVADAYSIVIMSCIYEMNGMRDELRKFKEHIGQVPPQLLGHYQHFFDNLLSLEFKFDDIGSAGRLALDMCKSKVLVSVENLGFDSEKPRVLPVGSHHIRSGLKIHISPKLLQRDSSLGVDTEATFVNYSNSKLGITNKTLAKLVYGYKRHDNLPELSKLLFSLGGSRLCADVIDACVAIGWLEAAHDILDDMNSAGYPMELATYRMVLSGYYKSKMLRNAEVLLKQMTKAGLITDPSNEIVVSPETEEKDSENTELRDLLVQEINAGKQMKAPSMLYELNSSLYYFCKAKMQGDALITYRKIPKMKIPPTVQSFWILIDMYSSLGMYREITIVWGDIKRNIASKNLKTTQDLLEKLVVNFLRGGYFERVMELISYMKENDMYNDLTMYKNEYLKLHKNLYRTLKASDAVTEAQAQRLEHVKTFRKLVGIV

Target ORF information:

RefSeq Version	NM_001125530.2
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Pentatricopeptide repeat (PPR) superfamily protein (AT4G17616), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001125530.2

ORF Insert Sequence:

ATGTTTAGGA AACGGAACTT AGTTCTAGAA TCATTTCGTC GATTCGATAG CGGTAACGTA 
GAAACCCTAA TTTCATGGGT CTTGTGTAGT CGCACCTCAA AGCCGTCTCT GTTCTGTACT 
AGTGTTAAAC CTGCTAGATT AAACTGGGAA GTTTCTTCTC AAGTAATTCT CAAGAAGAAG 
CTAGAAACAG CTCTTAAAGA TCACCGTGTA GATGATGCTT GGGACGTGTT TAAAGATTTC 
AAACGCCTCT ATGGATTTCC AGAGAGTGTA ATCATGAACA GATTTGTTAC TGTGTTGTCT 
TACTCGTCTG ATGCTGGTTG GCTTTGTAAG GCTAGTGATC TTACTCGTTT GGCTTTGAAG 
CAAAATCCAG GTATGTTAAG TGGCGATGTG TTAACAAAGT TGTCGTTGTC TCTAGCGAGA 
GCTCAGATGG TTGAATCTGC TTGTAGTATC CTTCGAATAA TGCTGGAGAA GGGATATGTT 
CTAACCTCAG ATGTATTGAG GCTTGTTGTG ATGCATATGG TGAAAACAGA GATTGGGACT 
TGCTTAGCTT CGAATTATTT GGTTCAGGTT TGTGATCGTT TTGTGGAGTT CAATGTGGGG 
AAAAGAAATA GCAGCCCCGG GAATGTTGTG AAGCCTGATA CGGTCTTGTT TAATCTTGTA 
CTTGGTTCTT GTGTGAGATT TGGTTTCTCT CTCAAAGGCC AAGAACTTAT CGAGCTAATG 
GCAAAAGTTG ATGTCGTTGC GGATGCGTAC TCGATTGTGA TCATGTCTTG TATTTATGAA 
ATGAATGGTA TGCGGGATGA GTTGAGGAAG TTCAAGGAGC ATATTGGTCA GGTACCCCCT 
CAACTTCTTG GTCACTATCA GCATTTTTTT GATAATTTGT TAAGCCTGGA GTTCAAATTT 
GATGATATCG GTTCTGCGGG TCGGCTTGCC TTAGATATGT GCAAGAGTAA GGTCTTGGTT 
TCAGTTGAGA ATCTTGGATT TGATTCTGAA AAGCCTCGGG TTTTGCCTGT TGGGTCACAC 
CATATCAGAT CTGGGTTAAA GATCCATATT TCACCCAAGC TTTTGCAGAG AGATTCATCT 
CTCGGAGTGG ATACTGAAGC AACATTTGTT AATTATTCCA ATTCCAAGCT TGGTATCACA 
AACAAGACTC TTGCCAAGTT AGTATATGGG TACAAGAGAC ATGATAATCT CCCTGAGCTA 
TCAAAGCTTT TGTTTTCGCT GGGTGGATCC AGGTTATGTG CTGATGTCAT TGATGCTTGT 
GTTGCTATTG GTTGGTTAGA AGCTGCTCAT GATATTCTTG ACGACATGAA TTCTGCTGGC 
TATCCCATGG AATTGGCCAC ATATAGGATG GTCTTGTCAG GTTATTACAA GAGCAAGATG 
TTGAGGAATG CAGAAGTTCT TCTGAAACAA ATGACGAAAG CCGGCCTAAT TACAGATCCA 
TCAAATGAAA TTGTGGTTTC ACCAGAAACT GAAGAGAAAG ACAGTGAAAA CACAGAGCTC 
AGGGATCTCT TGGTTCAGGA AATCAATGCA GGAAAACAAA TGAAAGCTCC AAGTATGCTC 
TATGAGCTAA ACTCGTCCCT CTACTACTTC TGCAAAGCTA AAATGCAAGG AGATGCCTTA 
ATAACCTACC GGAAAATCCC CAAGATGAAA ATCCCACCAA CTGTCCAAAG CTTTTGGATC 
TTGATCGACA TGTACTCATC TCTTGGCATG TACCGGGAGA TCACAATCGT GTGGGGAGAT 
ATCAAGAGGA ACATTGCAAG CAAAAACTTA AAGACAACAC AAGATCTGTT AGAGAAGCTT 
GTGGTGAACT TTCTCAGAGG CGGGTATTTT GAGAGAGTAA TGGAGCTTAT CAGTTATATG 
AAGGAGAATG ATATGTATAA TGATCTAACC ATGTATAAGA ATGAGTATCT TAAGCTTCAT 
AAGAATCTAT ACAGAACCTT GAAAGCATCA GATGCTGTAA CAGAGGCTCA AGCTCAGAGG 
CTTGAGCATG TCAAAACCTT CAGGAAACTA GTTGGTATAG TATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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AT4G17616 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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