Gene Symbol | VPS13 |
Entrez Gene ID | 850619 |
Full Name | membrane morphogenesis protein VPS13 |
Synonyms | SOI1,VPT2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » VPS13 cDNA ORF clone
Gene Symbol | VPS13 |
Entrez Gene ID | 850619 |
Full Name | membrane morphogenesis protein VPS13 |
Synonyms | SOI1,VPT2 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001181860.1 | NP_013060.1 | membrane morphogenesis protein VPS13 |
Homo sapiens (human) | VPS13A | NP_150648.2 |
LOC705323 | XP_002808150.1 | |
Canis lupus familiaris (dog) | VPS13A | XP_533522.3 |
Bos taurus (cattle) | VPS13A | XP_002689716.3 |
Drosophila melanogaster (fruit fly) | Vps13 | NP_001260781.1 |
Saccharomyces cerevisiae (baker's yeast) | VPS13 | NP_013060.1 |
Eremothecium gossypii | AGOS_ACL064C | NP_983340.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_06537 | XP_003717004.1 |
Rattus norvegicus (Norway rat) | Vps13a | NP_001094445.2 |
Kluyveromyces lactis | KLLA0E00705g | XP_453978.1 |
Pan troglodytes (chimpanzee) | VPS13A | XP_001148547.1 |
Mus musculus (house mouse) | Vps13a | NP_766616.2 |
Xenopus tropicalis (tropical clawed frog) | vps13a | XP_002937242.2 |
Gallus gallus (chicken) | VPS13A | NP_001264765.1 |
Neurospora crassa | NCU05837 | XP_960097.1 |
Danio rerio (zebrafish) | vps13a | NP_001112365.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP005082 | XP_558472.3 |
Caenorhabditis elegans (roundworm) | T08G11.1 | NP_740900.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII.
Johnston M, Hillier L, Riles L, Albermann K, Andr? B, Ansorge W, Benes V, Br?ckner M, Delius H, Dubois E, D?sterh?ft A, Entian KD, Floeth M, Goffeau A, Hebling U, Heumann K, Heuss-Neitzel D, Hilbert H, Hilger F, Kleine K, K?tter P, Louis EJ, Messenguy F, Mewes HW, Hoheisel JD
Nature387(6632 Suppl)87-90(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
findings support a model in which Mcp1 and Vps13 work as functional effectors of vacuole-mitochondria contact sites, while tethering is mediated by other factors, including Vps39.
Title: Vps13-Mcp1 interact at vacuole-mitochondria interfaces and bypass ER-mitochondria contact sites.
These results suggest that PI3P regulates the functioning of Vps13, both in protein trafficking and actin cytoskeleton organization. Attenuation of PI3P-binding ability in the mutant hVps13A protein may be one of the reasons for its mislocalization and disrupted function in cells of patients suffering from chorea-acanthocytosis .
Title: Amino acid substitution equivalent to human chorea-acanthocytosis I2771R in yeast Vps13 protein affects its binding to phosphatidylinositol 3-phosphate.
The Vps13p-Cdc31p complex is directly required for transgolgi network late endosome transport and TGN homotypic fusion.
Title: The Vps13p-Cdc31p complex is directly required for TGN late endosome transport and TGN homotypic fusion.
his study demonstrates that VPS13 is also important for mitochondrial integrity. Introduction of VPS13A mutations identified in chorea acanthocytosis patients at cognate sites in yeast VPS13 are specifically defective in compensating for the lack of ERMES, suggesting that mitochondrial dysfunction might be the basis for chorea acanthocytosis.
Title: Yeast Vps13 promotes mitochondrial function and is localized at membrane contact sites.
Vps13 dynamically localizes to vacuole-mitochondria and to vacuole-nucleus contact sites depending on growth conditions, suggesting that ERMES function can be bypassed by the activity of other contact sites.
Title: ER-mitochondrial junctions can be bypassed by dominant mutations in the endosomal protein Vps13.
The following VPS13 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS13 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi00294 | |
Clone ID Related Accession (Same CDS sequence) | NM_001181860.1 | |
Accession Version | NM_001181860.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 9435bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | membrane morphogenesis protein VPS13 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001144). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGTTAGAGT CTTTAGCTGC TAATTTGCTA AACCGATTGC TAGGCTCATA TGTGGAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_013060.1 |
CDS | 1..9435 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001181860.1 |
1 | ATGTTAGAGT CTTTAGCTGC TAATTTGCTA AACCGATTGC TAGGCTCATA TGTGGAAAAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. |
Life with 6000 genes. |