Gene Symbol | LOC4342575 |
Entrez Gene ID | 4342575 |
Full Name | DNA (cytosine-5)-methyltransferase 1B |
Synonyms | MET1,MET1-2,MET1B,OJ1506_G02.17,OsMET1-2,OsMET1b |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
ORF » Species Summary » Oryza sativa Japonica Group » LOC4342575 cDNA ORF clone
Gene Symbol | LOC4342575 |
Entrez Gene ID | 4342575 |
Full Name | DNA (cytosine-5)-methyltransferase 1B |
Synonyms | MET1,MET1-2,MET1B,OJ1506_G02.17,OsMET1-2,OsMET1b |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
mRNA | Protein | Name |
---|---|---|
XM_015789522.2 | XP_015645008.1 | DNA (cytosine-5)-methyltransferase 1B |
XM_015789523.2 | XP_015645009.1 | DNA (cytosine-5)-methyltransferase 1B |
XM_026027125.1 | XP_025882910.1 | DNA (cytosine-5)-methyltransferase 1B |
XM_015789522.1 | XP_015645008.1 | DNA (cytosine-5)-methyltransferase 1B |
XM_015789523.1 | XP_015645009.1 | DNA (cytosine-5)-methyltransferase 1B |
Arabidopsis thaliana (thale cress) | MEE57 | NP_193097.1 |
Homo sapiens (human) | DNMT1 | NP_001124295.1 |
Bos taurus (cattle) | DNMT1 | NP_872592.2 |
Danio rerio (zebrafish) | dnmt1 | NP_571264.1 |
Oryza sativa (rice) | Os03g0798300 | NP_001051569.1 |
Oryza sativa (rice) | Os07g0182900 | NP_001059052.1 |
Canis lupus familiaris (dog) | DNMT1 | XP_533919.4 |
Arabidopsis thaliana (thale cress) | AT4G08990 | NP_192638.1 |
Xenopus tropicalis (tropical clawed frog) | dnmt1 | XP_002934384.1 |
Pan troglodytes (chimpanzee) | DNMT1 | XP_512361.3 |
DNMT1 | XP_001104704.2 | |
Mus musculus (house mouse) | Dnmt1 | NP_001186360.2 |
Rattus norvegicus (Norway rat) | Dnmt1 | NP_445806.3 |
Arabidopsis thaliana (thale cress) | DMT2 | NP_193150.1 |
Arabidopsis thaliana (thale cress) | MET1 | NP_199727.1 |
Gallus gallus (chicken) | DNMT1 | NP_996835.1 |
The following LOC4342575 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4342575 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OOa36341 | |
Clone ID Related Accession (Same CDS sequence) | XM_015789522.2 , XM_015789523.2 , XM_026027125.1 , XM_015789522.1 , XM_015789523.1 | |
Accession Version | XM_015789522.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | DNA (cytosine-5)-methyltransferase 1B | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015789522.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015645008.1 |
CDS | 311..4900 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa36341 | |
Clone ID Related Accession (Same CDS sequence) | XM_015789522.2 , XM_015789523.2 , XM_026027125.1 , XM_015789522.1 , XM_015789523.1 | |
Accession Version | XM_015789523.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | DNA (cytosine-5)-methyltransferase 1B | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015789523.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015645009.1 |
CDS | 367..4956 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa36341 | |
Clone ID Related Accession (Same CDS sequence) | XM_015789522.2 , XM_015789523.2 , XM_026027125.1 , XM_015789522.1 , XM_015789523.1 | |
Accession Version | XM_026027125.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | DNA (cytosine-5)-methyltransferase 1B | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029262.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025882910.1 |
CDS | 358..4947 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa36341 | |
Clone ID Related Accession (Same CDS sequence) | XM_015789522.2 , XM_015789523.2 , XM_026027125.1 , XM_015789522.1 , XM_015789523.1 | |
Accession Version | XM_015789522.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | DNA (cytosine-5)-methyltransferase 1B | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015645008.1 |
CDS | 257..4846 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa36341 | |
Clone ID Related Accession (Same CDS sequence) | XM_015789522.2 , XM_015789523.2 , XM_026027125.1 , XM_015789522.1 , XM_015789523.1 | |
Accession Version | XM_015789523.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 4590bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | DNA (cytosine-5)-methyltransferase 1B | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379180.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015645009.1 |
CDS | 295..4884 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGGTGAAAA GTCCGTGTTC TCCCGTTACC ACAGGAAAGA AAAGGTGCAG AGCAAAGCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.