PCDHA11 cDNA ORF clone, Homo sapiens(human)

Gene
Clones
gRNAs

Summary

Gene Symbol	PCDHA11
Entrez Gene ID	56138
Full Name	protocadherin alpha 11
Synonyms	CNR7,CNRN7,CNRS7,CRNR7,PCDH-ALPHA11
General protein information	Preferred Names protocadherin alpha 11 Names protocadherin alpha-11 KIAA0345-like 3
Gene Type	protein-coding
Organism	Homo sapiens(human)
Genome	Chromosome: 5 Map Location: 5q31.3
Summary	This gene is a member of the protocadherin alpha gene cluster, one of three related gene clusters tandemly linked on chromosome five that demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The alpha gene cluster is composed of 15 cadherin superfamily genes related to the mouse CNR genes and consists of 13 highly similar and 2 more distantly related coding sequences. The tandem array of 15 N-terminal exons, or variable exons, are followed by downstream C-terminal exons, or constant exons, which are shared by all genes in the cluster. The large, uninterrupted N-terminal exons each encode six cadherin ectodomains while the C-terminal exons encode the cytoplasmic domain. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell connections in the brain. Alternative splicing has been observed and additional variants have been suggested but their full-length nature has yet to be determined. [provided by RefSeq, Jul 2008].
Disorder MIM:	606317

mRNA and Protein(s)

mRNA	Protein	Name
NM_018902.5	NP_061725.1	protocadherin alpha-11 isoform 1 precursor
NM_031861.2	NP_114067.1	protocadherin alpha-11 isoform 2 precursor
NM_018902.4	NP_061725.1	protocadherin alpha-11 isoform 1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	PCDHA11	NP_061725.1
Rattus norvegicus (Norway rat)	Pcdha12	NP_446392.1
Mus musculus (house mouse)	Pcdha11	NP_034090.1
Pan troglodytes (chimpanzee)	PCDHA11	NP_001076057.1

Gene Ontology
Bibliography

Related articles in PubMed

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Fox CS, Liu Y, White CC, Feitosa M, Smith AV, Heard-Costa N, Lohman K, , , , Johnson AD, Foster MC, Greenawalt DM, Griffin P, Ding J, Newman AB, Tylavsky F, Miljkovic I, Kritchevsky SB, Launer L, Garcia M, Eiriksdottir G, Carr JJ, Gudnason V, Harris TB, Cupples LA, Borecki IB
PLoS genetics8(5)e1002695(2012)

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.
Wu C, Ma MH, Brown KR, Geisler M, Li L, Tzeng E, Jia CY, Jurisica I, Li SS
Proteomics7(11)1775-85(2007 Jun)

The DNA sequence and comparative analysis of human chromosome 5.
Schmutz J, Martin J, Terry A, Couronne O, Grimwood J, Lowry S, Gordon LA, Scott D, Xie G, Huang W, Hellsten U, Tran-Gyamfi M, She X, Prabhakar S, Aerts A, Altherr M, Bajorek E, Black S, Branscomb E, Caoile C, Challacombe JF, Chan YM, Denys M, Detter JC, Escobar J, Flowers D, Fotopulos D, Glavina T, Gomez M, Gonzales E, Goodstein D, Grigoriev I, Groza M, Hammon N, Hawkins T, Haydu L, Israni S, Jett J, Kadner K, Kimball H, Kobayashi A, Lopez F, Lou Y, Martinez D, Medina C, Morgan J, Nandkeshwar R, Noonan JP, Pitluck S, Pollard M, Predki P, Priest J, Ramirez L, Retterer J, Rodriguez A, Rogers S, Salamov A, Salazar A, Thayer N, Tice H, Tsai M, Ustaszewska A, Vo N, Wheeler J, Wu K, Yang J, Dickson M, Cheng JF, Eichler EE, Olsen A, Pennacchio LA, Rokhsar DS, Richardson P, Lucas SM, Myers RM, Rubin EM
Nature431(7006)268-74(2004 Sep)

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.
Wu Q, Zhang T, Cheng JF, Kim Y, Grimwood J, Schmutz J, Dickson M, Noonan JP, Zhang MQ, Myers RM, Maniatis T
Genome research11(3)389-404(2001 Mar)

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.
Nollet F, Kools P, van Roy F
Journal of molecular biology299(3)551-72(2000 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following PCDHA11 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the PCDHA11 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
OHu00586	NM_018902.5 Latest version!	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	in pcDNA3.1-C-(k)DYK	$469.50-$657.30 $939.00
OHu07941	NM_031861.2 Latest version!	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 2, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$265.30 $379.00
View Old Accession Versions >>
OHu00586	NM_018902.4	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	in pcDNA3.1-C-(k)DYK	$469.50-$657.30 $939.00
Hide Old Accession Versions >>

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***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

PCDHA11 ( NM_018902.5 ) cDNA ORF clone, Homo sapiens(human) -> NP_061725.1 Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OHu00586
Clone ID Related Accession (Same CDS sequence)	NM_018902.5 , NM_018902.4
Accession Version	NM_018902.5 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2850bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-19
Organism	Homo sapiens(human)
Product	protocadherin alpha-11 isoform 1 precursor
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC005609.1 and AC010223.6. On Nov 22, 2019 this sequence version replaced NM_018902.4. Transcript Variant: This variant (1) includes the constant region exons and encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: AF152307.1, AJ007609.1 [ECO:0000332] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end.

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GCCACGACAG 
CCCAACCCTG ACTGGCGTTA CTCTGCCTCC CTGAGAGCAG GCATGCACAG CTCTGTGCAC 
CTAGAGGAGG CTGGCATTCT ACGGGCTGGT CCAGGAGGGC CTGATCAGCA GTGGCCAACA 
GTATCCAGTG CAACACCAGA ACCAGAGGCA GGAGAAGTGT CCCCTCCAGT CGGTGCGGGT 
GTCAACAGCA ACAGCTGGAC CTTTAAATAC GGACCAGGCA ACCCCAAACA ATCCGGTCCC 
GGTGAGTTGC CCGACAAATT CATTATCCCA GGATCTCCTG CAATCATCTC CATCCGGCAG 
GAGCCTACTA ACAGCCAAAT TGACAAAAGT GACTTCATAA CCTTCGGCAA AAAGGAGGAG 
ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT AACAAGACCC AGGAGAAAAA AGAGAAAGGG 
AACAGCACGA CTGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_061725.1
CDS	148..2997
Translation	MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSLDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_018902.5
Organism	Homo sapiens(human)
Definition	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_018902.5

ORF Insert Sequence:

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GCCACGACAG 
CCCAACCCTG ACTGGCGTTA CTCTGCCTCC CTGAGAGCAG GCATGCACAG CTCTGTGCAC 
CTAGAGGAGG CTGGCATTCT ACGGGCTGGT CCAGGAGGGC CTGATCAGCA GTGGCCAACA 
GTATCCAGTG CAACACCAGA ACCAGAGGCA GGAGAAGTGT CCCCTCCAGT CGGTGCGGGT 
GTCAACAGCA ACAGCTGGAC CTTTAAATAC GGACCAGGCA ACCCCAAACA ATCCGGTCCC 
GGTGAGTTGC CCGACAAATT CATTATCCCA GGATCTCCTG CAATCATCTC CATCCGGCAG 
GAGCCTACTA ACAGCCAAAT TGACAAAAGT GACTTCATAA CCTTCGGCAA AAAGGAGGAG 
ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT AACAAGACCC AGGAGAAAAA AGAGAAAGGG 
AACAGCACGA CTGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PCDHA11 ( NM_018902.4 ) cDNA ORF clone, Homo sapiens(human) -> NP_061725.1 Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.

Price & Availability↑

CloneID	OHu00586
Clone ID Related Accession (Same CDS sequence)	NM_018902.5 , NM_018902.4
Accession Version	NM_018902.4	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2850bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-03
Organism	Homo sapiens(human)
Product	protocadherin alpha-11 isoform 1 precursor
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BX111117.1, DB349483.1, BC136706.1 and AF152307.1. On Jul 19, 2013 this sequence version replaced NM_018902.3. Transcript Variant: This variant (1) includes the constant region exons and encodes the longest isoform (1). ##Evidence-Data-START## Transcript exon combination :: AF152307.1, SRR1803612.268125.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1968540, SAMEA1968832 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression, longest protein ##RefSeq-Attributes-END## COMPLETENESS: complete on the 3' end.

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GCCACGACAG 
CCCAACCCTG ACTGGCGTTA CTCTGCCTCC CTGAGAGCAG GCATGCACAG CTCTGTGCAC 
CTAGAGGAGG CTGGCATTCT ACGGGCTGGT CCAGGAGGGC CTGATCAGCA GTGGCCAACA 
GTATCCAGTG CAACACCAGA ACCAGAGGCA GGAGAAGTGT CCCCTCCAGT CGGTGCGGGT 
GTCAACAGCA ACAGCTGGAC CTTTAAATAC GGACCAGGCA ACCCCAAACA ATCCGGTCCC 
GGTGAGTTGC CCGACAAATT CATTATCCCA GGATCTCCTG CAATCATCTC CATCCGGCAG 
GAGCCTACTA ACAGCCAAAT TGACAAAAGT GACTTCATAA CCTTCGGCAA AAAGGAGGAG 
ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT AACAAGACCC AGGAGAAAAA AGAGAAAGGG 
AACAGCACGA CTGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_061725.1
CDS	1592..4441
Translation	MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSLDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_018902.4
Organism	Homo sapiens(human)
Definition	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_018902.4

ORF Insert Sequence:

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GCCACGACAG 
CCCAACCCTG ACTGGCGTTA CTCTGCCTCC CTGAGAGCAG GCATGCACAG CTCTGTGCAC 
CTAGAGGAGG CTGGCATTCT ACGGGCTGGT CCAGGAGGGC CTGATCAGCA GTGGCCAACA 
GTATCCAGTG CAACACCAGA ACCAGAGGCA GGAGAAGTGT CCCCTCCAGT CGGTGCGGGT 
GTCAACAGCA ACAGCTGGAC CTTTAAATAC GGACCAGGCA ACCCCAAACA ATCCGGTCCC 
GGTGAGTTGC CCGACAAATT CATTATCCCA GGATCTCCTG CAATCATCTC CATCCGGCAG 
GAGCCTACTA ACAGCCAAAT TGACAAAAGT GACTTCATAA CCTTCGGCAA AAAGGAGGAG 
ACCAAGAAAA AGAAGAAAAA GAAGAAGGGT AACAAGACCC AGGAGAAAAA AGAGAAAGGG 
AACAGCACGA CTGACAACAG TGACCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PCDHA11 ( NM_031861.2 ) cDNA ORF clone, Homo sapiens(human) -> NP_114067.1 Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 2, mRNA.

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CloneID	OHu07941
Clone ID Related Accession (Same CDS sequence)	NM_031861.2
Accession Version	NM_031861.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2433bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-08-05
Organism	Homo sapiens(human)
Product	protocadherin alpha-11 isoform 2 precursor
Comment	Comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BX111117.1, DB349483.1, BC136706.1 and AC005609.1. On Jul 19, 2013 this sequence version replaced NM_031861.1. Transcript Variant: This variant (2) utilizes the large, first exon then continues into the downstream intron 1 sequence before terminating. This one-exon transcript encodes a shorter isoform (2).

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GGTGAGTTTT 
CTACAGATTC CACCTATCAG GAAGTGTATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_114067.1
CDS	1592..4024
Translation	MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSAECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSLDSPTNGKQIKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGEVRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGDRALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLIIAICVVSSLLVLTLLLYTALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQVSFLQIPPIRKCM

Target ORF information:

RefSeq Version	NM_031861.2
Organism	Homo sapiens(human)
Definition	Homo sapiens protocadherin alpha 11 (PCDHA11), transcript variant 2, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_031861.2

ORF Insert Sequence:

ATGTTTGGTT TTCAGAGAAG GGGATTGGGC ACCCCACGAC TACAGCTCTG GCTTCTCCTC 
CTCGAATTCT GGGAGGTGGG GAGCGGCCAG CTCCACTACT CCGTCTCGGA GGAGGCCAAA 
CACGGCACCT TCGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGGC GGAGCTGGTG 
CAGCGCCTGT TCCGGGTGGC GTCCAAAACA CATGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGCGAGG AGCTGTGCGG GCAGAGCGCG 
GAGTGCAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCATGTGAAC 
GTGGAGGTGA AGGACATTAA CGACAACCCG CCGGTGTTCT CGCTCAGAGA ACAAAAGCTG 
CTGATTGCGG AATCTAAGCA ATCGGACTCG CGTTTTCCAC TAGAGGGAGC TTCTGATGCT 
GACATTGAAG AGAATGCTCT ATTGACCTAC AGGCTAAGTA AAAATGAGTA TTTTTCTTTA 
GATTCACCAA CAAATGGTAA GCAGATTAAA AGACTGTCAC TTATTTTAAA GAAGTCTCTG 
GATAGAGAGA AAACTCCGGA ACTTAATTTG CTGCTAACAG CTACAGACGG GGGAAAACCA 
GAGCTTACTG GCACCGTTCG GCTGTTAGTC CAAGTCTTGG ATGTCAACGA CAATGATCCA 
GAGTTTGATA AATCAGAATA TAAGGTGAGC CTTATGGAAA ATGCTGCTAA AGAAACTCTT 
GTGCTCAAAC TAAACGCCAC AGACCGAGAC GAAGGAGTCA ATGGAGAGGT AACATACTCC 
TTAATGTCAA TTAAGCCCAA TGGAAGACAC TTATTTACAC TAGATCAAAA TAATGGAGAA 
GTGAGGGTCA ATGGAACTTT AGATTATGAA GAAAACAAGT TTTATAAAAT TGAAGTACAG 
GCTACAGATA AGGGGACTCC CCCAATGGCA GGTCACTGTA CAGTCTGGGT GGAAATCTTG 
GACACCAACG ATAACTCTCC TGAAGTCGCC GTGACTTCCT TGTCCCTCCC AGTACGAGAG 
GACGCTCAGC CCAGCACGGT CATTGCCCTG ATCAGCGTGT CTGACCGTGA CTCAGGTGTC 
AACGGACAGG TGACCTGCTC GCTGACGCCC CACGTTCCCT TCAAGCTGGT GTCCACCTTC 
AAGAATTACT ACTCGTTGGT GCTGGACAGC GCCCTGGACC GCGAGAACGT GTGGGCCTAT 
GAACTGGTGG TGACTGCGCG GGATGGGGGT TCGCCTTCTC TGTGGGCCAC GGCCAGGGTA 
TCCGTGGAGG TGGCCGACGT GAACGACAAT GCGCCTGCGT TCGCACAGCC CGAGTACACC 
GTGTTCGTGA AGGAGAACAA CCCACCAGGC TGCCACATCT TCACAGTGTC GGCGCGGGAC 
GCGGACGCGC AGGAGAACGC GCTGGTGTCC TACTCGCTGG TGGAGCGGCG GTTGGGCGAC 
CGCGCGCTGT CGAGCTACGT GTCGGTGCAC GCGGAGAGCG GCAAGGTGTA CGCGCTGCAG 
CCGTTGGACC ACGAGGAGCT GGAGCTGCTA CAGTTCCAGG TGAGCGCGCG CGATGCGGGC 
GTGCCGCCTC TGAGCAGCAA CGTGACGCTG CAGGTGTTCG TGCTGGACGA GAACGACAAC 
GCGCCGGCAC TGCTGGCGAC TCAGGCTGGC AGCGCGGGAG GCGCAGTTAA CAAGCTAGTA 
CCGCGGTCGG TGGGTGCGGG CCACGTGGTG GCGAAGGTGC GCGCAGTGGA TGCGGACTCA 
GGCTACAACG CGTGGCTTTC ATATGAATTG CAGCCGGCGG CGGGCGGCTC GCGCATCCCG 
TTCCGCGTGG GGCTGTACAC GGGCGAGATA AGCACAACGC GTGCCCTGGA CGAGGCAGAC 
TCGCCGCGCC ACCGACTTCT AGTACTGGTG AAGGATCACG GTGAGCCGGC GCTGACGGCC 
ACGGCCACCG TGCTGGTGTC GTTGGTGGAG AGCGGACAGG CGCCAAAGGC CTCTTCCCGG 
ACTTTGGCGG GCGCCGCGAG CCCAGAGGCT GCGCTGGTGG ATGTCAACGT GTACCTGATC 
ATCGCCATCT GCGTGGTGTC CAGCCTCCTG GTACTCACGC TGCTGCTGTA TACGGCGCTG 
TGGTGGTCGG CAACGCCCAC TGAGGGCGCG TGCGCGCCGG GGAAGCCCAC GCTGGTGTGC 
TCCCGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GGCAGAGGGT GTGCTCTGAG 
GAGGGCCCAC CTAAGACGGA CCTCATGGCC TTCAGCCCCA GTCTTCCTCT AGGTCTGAAT 
AAAGAGGAGG AAGGGGAAAG ACAGGAGCCA GGGTCAAATC ACCCCGGACA GGTGAGTTTT 
CTACAGATTC CACCTATCAG GAAGTGTATG TGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
PLoS genetics8(5)e1002695(2012)
Fox CS,Liu Y,White CC,Feitosa M,Smith AV,Heard-Costa N,Lohman K,,,,Johnson AD,Foster MC,Greenawalt DM,Griffin P,Ding J,Newman AB,Tylavsky F,Miljkovic I,Kritchevsky SB,Launer L,Garcia M,Eiriksdottir G,Carr JJ,Gudnason V,Harris TB,Cupples LA,Borecki IB

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.
Proteomics7(11)1775-85(2007 Jun)
Wu C,Ma MH,Brown KR,Geisler M,Li L,Tzeng E,Jia CY,Jurisica I,Li SS

The DNA sequence and comparative analysis of human chromosome 5.
Nature431(7006)268-74(2004 Sep)
Schmutz J,Martin J,Terry A,Couronne O,Grimwood J,Lowry S,Gordon LA,Scott D,Xie G,Huang W,Hellsten U,Tran-Gyamfi M,She X,Prabhakar S,Aerts A,Altherr M,Bajorek E,Black S,Branscomb E,Caoile C,Challacombe JF,Chan YM,Denys M,Detter JC,Escobar J,Flowers D,Fotopulos D,Glavina T,Gomez M,Gonzales E,Goodstein D,Grigoriev I,Groza M,Hammon N,Hawkins T,Haydu L,Israni S,Jett J,Kadner K,Kimball H,Kobayashi A,Lopez F,Lou Y,Martinez D,Medina C,Morgan J,Nandkeshwar R,Noonan JP,Pitluck S,Pollard M,Predki P,Priest J,Ramirez L,Retterer J,Rodriguez A,Rogers S,Salamov A,Salazar A,Thayer N,Tice H,Tsai M,Ustaszewska A,Vo N,Wheeler J,Wu K,Yang J,Dickson M,Cheng JF,Eichler EE,Olsen A,Pennacchio LA,Rokhsar DS,Richardson P,Lucas SM,Myers RM,Rubin EM

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.
Genome research11(3)389-404(2001 Mar)
Wu Q,Zhang T,Cheng JF,Kim Y,Grimwood J,Schmutz J,Dickson M,Noonan JP,Zhang MQ,Myers RM,Maniatis T

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.
Journal of molecular biology299(3)551-72(2000 Jun)
Nollet F,Kools P,van Roy F

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PCDHA11 cDNA ORF clone, Homo sapiens(human)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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