sel1l cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	sel1l
Entrez Gene ID	568615
Full Name	sel-1 suppressor of lin-12-like (C. elegans)
Synonyms	fj60e07,si:dkey-177p2.3,wu:fj60e07,zgc:56075
General protein information	Preferred Names sel-1 suppressor of lin-12-like (C. elegans) Names protein sel-1 homolog 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001045164.1	NP_001038629.1	protein sel-1 homolog 1 precursor

Pathways from BioSystems

Homologies

Homo sapiens (human)	SEL1L	NP_005056.3
Arabidopsis thaliana (thale cress)	AT1G18260	NP_564049.1
Pan troglodytes (chimpanzee)	SEL1L	XP_510102.3
Bos taurus (cattle)	SEL1L	NP_001193837.1
Gallus gallus (chicken)	SEL1L	XP_421303.2
Danio rerio (zebrafish)	sel1l	NP_001038629.1
Caenorhabditis elegans (roundworm)	sel-1	NP_506144.1
Rattus norvegicus (Norway rat)	Sel1l	NP_808794.2
Mus musculus (house mouse)	Sel1l	NP_001034178.1
Drosophila melanogaster (fruit fly)	Hrd3	NP_001262882.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000615	XP_310466.4
Arabidopsis thaliana (thale cress)	AT1G73570	NP_177498.1
Xenopus tropicalis (tropical clawed frog)	sel1l	XP_002938416.1
	SEL1L	XP_001105925.1
Canis lupus familiaris (dog)	SEL1L	XP_537530.2
Oryza sativa (rice)	Os03g0259300	NP_001049611.1

Gene Ontology
Bibliography

Related articles in PubMed

Sel1l knockdown negatively influences zebrafish embryos endothelium.
Barbieri A, Carra S, De Blasio P, Cotelli F, Biunno I
Journal of cellular physiology(2017 Dec)

Evolution of complexity in the zebrafish synapse proteome.
Bay?s ?, Collins MO, Reig-Viader R, Gou G, Goulding D, Izquierdo A, Choudhary JS, Emes RD, Grant SG
Nature communications814613(2017 Mar)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

Deep mRNA sequencing analysis to capture the transcriptome landscape of zebrafish embryos and larvae.
Yang H, Zhou Y, Gu J, Xie S, Xu Y, Zhu G, Wang L, Huang J, Ma H, Yao J
PloS one8(5)e64058(2013)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following sel1l gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the sel1l cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa35710	NM_001045164.1 Latest version!	Danio rerio SEL1L adaptor subunit of ERAD E3 ubiquitin ligase (sel1l), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

sel1l ( NM_001045164.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001038629.1 Danio rerio SEL1L adaptor subunit of ERAD E3 ubiquitin ligase (sel1l), mRNA.

Price & Availability↑

CloneID	ODa35710
Clone ID Related Accession (Same CDS sequence)	NM_001045164.1
Accession Version	NM_001045164.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2331bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-05-18
Organism	Danio rerio(zebrafish)
Product	protein sel-1 homolog 1 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX248515.4. On Sep 1, 2006 this sequence version replaced XM_691952.1. ##Evidence-Data-START## Transcript exon combination :: GFIL01034735.1, GDQH01000500.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGAATTCAG CTAAGAAGTC TTGCCTGGTC CTGATTGTGG CTTTAGCTGT GACTTTGGAA 
GTGACAGCTG GTGAAGTACC CTCAGATGAT GGTGTTGGTG AGGGTGGGGA TTCTCAGAGC 
ACTGCTGAAA ATGAAGGTGC CAATATTGTG ACAGGACGTG CATATGTTCC TAAAGATGCC 
CAGACTGACA GCAGTACAAC AGACACTGAT ATGGAGATCA AAGTTGATGA GATTGAAAAG 
GAAGACCTTC CTAGTCAGCC ACCTCCACCA CAGGAGCGTA GTAAAGAAGT TCCGGTGGTG 
AATGGTGGAA CGGCCTCTGG GGAGCCCTGC ATATTCCCTT TTCTTTTTCA AGGGAAGGAG 
TATTCAGACT GCACTACTGA AGGCAGAGGA GATGGGAGAC TGTGGTGTGC CACAACGTAC 
GACTACAATA ACGATAAGAG ATGGGGCTTC TGTGAAACGG AGGAGCAGGC AGAGCAGAGG 
AGGATGGCGG AAGAGGCTGA AGAACAGTAC CAAGCCACAG TTAGGATGAT TAATGGCACT 
AACCGAAGAA GCCAGAAGAA AGAACTGTTT GACAAACTCC TGCAGGTTGC AGAGATGGGT 
CATACCAAGG CCATGGAGAA GGTAGCATAT GCCATGCTGT TTGGAGACTA CTTACCCCAG 
AGCATTCCTC AGGCGAAGGA GATGTTTGAG AAGTTGGCAC TGGAGGGCTC GCCAAAAGCC 
CAGACTGCAC TTGGATTCCT GTATGCTGCA GGATTGGGTG TGAACTCAAG TCAGGCAAAG 
GCGTTGGTGT ACTACACCTT TGGAGCTTTG GGTGGAAACC TAGTGGCACA TATGATTCTG 
GGCTATAGAT ATTGGGGAGG TGTTGGAGTT CCTCAGAGCT GTGAATCTGC TCTCACTCAC 
TACAGACTAG TGGCCAATCA CGTGGCCAGC GACGTGTCTC TGACAGGGGG CAGTGCAGTA 
CAGCGGATCC GGCTCTTAGA TGAAGTGGAA AATCCTGGTT CTAGCAGTGG AATGCTAGAA 
GAGGACCTAA TCCAGTACTA CCAGTTCTTG GCTGAGAAAG GAGATGTGCA GGCACAGGTT 
GGTCTGGGTC AGTTACACCT ACATGGAGGA AGAGGTGTAG AGCAAAATCA CCAGCGGGCC 
TACGAGTACT TCAACCAGGC AGCAAACGCT GGGAACACAC ATGCTATGGC CTTCCTTGGA 
AAGATGTACT CTGAAGGTAG TGAGTATGTG CCTCAGAACA ATGAGACAGC ACTACATTAT 
TTCAAGAAGG CTGCAGACTT GGGTAATCCA GTTGGCCAGA GTGGCCTCGG TATGGCTTAC 
CTGTATGGAA GGGGTGTTCC TGTGAACTAT GACCTGGCCT TGAAGTATTT TCAAAAAGCT 
GCAGAGCAAG GATGGGTGGA TGGACAGCTG CAGCTAGGAA CCATGTACTA CAATGGCATT 
GGAGTGAAGC GTGATTACAA GCAGGCCCTT AAATTCTTCA ACCTGGCATC GCAAGCGGGT 
CACATCCTAG CCTTTTATAA CCTTGCCCAA ATGCATGCGA CAGGAACAGG GGTCATGCGC 
TCCTGTCACA CTGCCGTAGA GCTCTTCAAG AACGTGTGCG AGCGCGGCCG CTGGTCTGAG 
AGACTCATGG CGGCCTACAG AAGCTTTAAG GAGGGTGATA TGGACTCTGC TCTTATTCAG 
TATCTCCTGT TGGCAGAACA GGGCTATGAG GTTGCACAGA GCAATGTGGC CTTCGTCCTT 
GATCAAAAGG GGTCGCAGAT CTTCAATGAA AATGAAACAT ACCCACGGGC TTTGCTTCAT 
TGGACCAGAG CAGCTGCTCA AGGTTACACC GTTGCCCGAA TCAAGCTGGG CGACTACCAT 
TTCTATGGCT ATGGCACTGA TGTAGACTAT GAGACTGCAG TGATTCACTA TCGGCTGGCC 
TCTGAGCAGC AGCATAGTGC ACAGGCTATG TTCAACCTGG GTTATATGCA TGAGAAGGGC 
CTTGGGATCA AACAGGACAT TCATCTGGCT AAACGTTTCT ATGACATGGC TGCAGAAGCC 
AGTCCTGATG CCCAAGTTCC TGTGTTCCTG GCCCTGTGCA AGCTAGGCCT TGTTTATGCA 
CTACAGTACT TGCAGGATCT CAATCTGAAG GAGGTTCTGT CTCAGGTGGA TCTCGACCAG 
TTGCTTGGTC CAGAGTGGGA TCTCTACCTA ATGACTGTCA TTGCTCTGCT CTTGGGCACA 
GTAATCGCAT ATCGGCAGCG ACAGCACCAG GCTGTACCCA GAGCCCCTGC AGCACCCAAT 
AGACCTCCAG CCCAGCCGGA GCAGCCTGCC GAAGAGCCTG AAGAACAATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001038629.1
CDS	554..2884
Translation	MNSAKKSCLVLIVALAVTLEVTAGEVPSDDGVGEGGDSQSTAENEGANIVTGRAYVPKDAQTDSSTTDTDMEIKVDEIEKEDLPSQPPPPQERSKEVPVVNGGTASGEPCIFPFLFQGKEYSDCTTEGRGDGRLWCATTYDYNNDKRWGFCETEEQAEQRRMAEEAEEQYQATVRMINGTNRRSQKKELFDKLLQVAEMGHTKAMEKVAYAMLFGDYLPQSIPQAKEMFEKLALEGSPKAQTALGFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGGVGVPQSCESALTHYRLVANHVASDVSLTGGSAVQRIRLLDEVENPGSSSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAYEYFNQAANAGNTHAMAFLGKMYSEGSEYVPQNNETALHYFKKAADLGNPVGQSGLGMAYLYGRGVPVNYDLALKYFQKAAEQGWVDGQLQLGTMYYNGIGVKRDYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVELFKNVCERGRWSERLMAAYRSFKEGDMDSALIQYLLLAEQGYEVAQSNVAFVLDQKGSQIFNENETYPRALLHWTRAAAQGYTVARIKLGDYHFYGYGTDVDYETAVIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLGLVYALQYLQDLNLKEVLSQVDLDQLLGPEWDLYLMTVIALLLGTVIAYRQRQHQAVPRAPAAPNRPPAQPEQPAEEPEEQ

Target ORF information:

RefSeq Version	NM_001045164.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio SEL1L adaptor subunit of ERAD E3 ubiquitin ligase (sel1l), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001045164.1

ORF Insert Sequence:

ATGAATTCAG CTAAGAAGTC TTGCCTGGTC CTGATTGTGG CTTTAGCTGT GACTTTGGAA 
GTGACAGCTG GTGAAGTACC CTCAGATGAT GGTGTTGGTG AGGGTGGGGA TTCTCAGAGC 
ACTGCTGAAA ATGAAGGTGC CAATATTGTG ACAGGACGTG CATATGTTCC TAAAGATGCC 
CAGACTGACA GCAGTACAAC AGACACTGAT ATGGAGATCA AAGTTGATGA GATTGAAAAG 
GAAGACCTTC CTAGTCAGCC ACCTCCACCA CAGGAGCGTA GTAAAGAAGT TCCGGTGGTG 
AATGGTGGAA CGGCCTCTGG GGAGCCCTGC ATATTCCCTT TTCTTTTTCA AGGGAAGGAG 
TATTCAGACT GCACTACTGA AGGCAGAGGA GATGGGAGAC TGTGGTGTGC CACAACGTAC 
GACTACAATA ACGATAAGAG ATGGGGCTTC TGTGAAACGG AGGAGCAGGC AGAGCAGAGG 
AGGATGGCGG AAGAGGCTGA AGAACAGTAC CAAGCCACAG TTAGGATGAT TAATGGCACT 
AACCGAAGAA GCCAGAAGAA AGAACTGTTT GACAAACTCC TGCAGGTTGC AGAGATGGGT 
CATACCAAGG CCATGGAGAA GGTAGCATAT GCCATGCTGT TTGGAGACTA CTTACCCCAG 
AGCATTCCTC AGGCGAAGGA GATGTTTGAG AAGTTGGCAC TGGAGGGCTC GCCAAAAGCC 
CAGACTGCAC TTGGATTCCT GTATGCTGCA GGATTGGGTG TGAACTCAAG TCAGGCAAAG 
GCGTTGGTGT ACTACACCTT TGGAGCTTTG GGTGGAAACC TAGTGGCACA TATGATTCTG 
GGCTATAGAT ATTGGGGAGG TGTTGGAGTT CCTCAGAGCT GTGAATCTGC TCTCACTCAC 
TACAGACTAG TGGCCAATCA CGTGGCCAGC GACGTGTCTC TGACAGGGGG CAGTGCAGTA 
CAGCGGATCC GGCTCTTAGA TGAAGTGGAA AATCCTGGTT CTAGCAGTGG AATGCTAGAA 
GAGGACCTAA TCCAGTACTA CCAGTTCTTG GCTGAGAAAG GAGATGTGCA GGCACAGGTT 
GGTCTGGGTC AGTTACACCT ACATGGAGGA AGAGGTGTAG AGCAAAATCA CCAGCGGGCC 
TACGAGTACT TCAACCAGGC AGCAAACGCT GGGAACACAC ATGCTATGGC CTTCCTTGGA 
AAGATGTACT CTGAAGGTAG TGAGTATGTG CCTCAGAACA ATGAGACAGC ACTACATTAT 
TTCAAGAAGG CTGCAGACTT GGGTAATCCA GTTGGCCAGA GTGGCCTCGG TATGGCTTAC 
CTGTATGGAA GGGGTGTTCC TGTGAACTAT GACCTGGCCT TGAAGTATTT TCAAAAAGCT 
GCAGAGCAAG GATGGGTGGA TGGACAGCTG CAGCTAGGAA CCATGTACTA CAATGGCATT 
GGAGTGAAGC GTGATTACAA GCAGGCCCTT AAATTCTTCA ACCTGGCATC GCAAGCGGGT 
CACATCCTAG CCTTTTATAA CCTTGCCCAA ATGCATGCGA CAGGAACAGG GGTCATGCGC 
TCCTGTCACA CTGCCGTAGA GCTCTTCAAG AACGTGTGCG AGCGCGGCCG CTGGTCTGAG 
AGACTCATGG CGGCCTACAG AAGCTTTAAG GAGGGTGATA TGGACTCTGC TCTTATTCAG 
TATCTCCTGT TGGCAGAACA GGGCTATGAG GTTGCACAGA GCAATGTGGC CTTCGTCCTT 
GATCAAAAGG GGTCGCAGAT CTTCAATGAA AATGAAACAT ACCCACGGGC TTTGCTTCAT 
TGGACCAGAG CAGCTGCTCA AGGTTACACC GTTGCCCGAA TCAAGCTGGG CGACTACCAT 
TTCTATGGCT ATGGCACTGA TGTAGACTAT GAGACTGCAG TGATTCACTA TCGGCTGGCC 
TCTGAGCAGC AGCATAGTGC ACAGGCTATG TTCAACCTGG GTTATATGCA TGAGAAGGGC 
CTTGGGATCA AACAGGACAT TCATCTGGCT AAACGTTTCT ATGACATGGC TGCAGAAGCC 
AGTCCTGATG CCCAAGTTCC TGTGTTCCTG GCCCTGTGCA AGCTAGGCCT TGTTTATGCA 
CTACAGTACT TGCAGGATCT CAATCTGAAG GAGGTTCTGT CTCAGGTGGA TCTCGACCAG 
TTGCTTGGTC CAGAGTGGGA TCTCTACCTA ATGACTGTCA TTGCTCTGCT CTTGGGCACA 
GTAATCGCAT ATCGGCAGCG ACAGCACCAG GCTGTACCCA GAGCCCCTGC AGCACCCAAT 
AGACCTCCAG CCCAGCCGGA GCAGCCTGCC GAAGAGCCTG AAGAACAATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sel1l knockdown negatively influences zebrafish embryos endothelium.
Journal of cellular physiology(2017 Dec)
Barbieri A,Carra S,De Blasio P,Cotelli F,Biunno I

Evolution of complexity in the zebrafish synapse proteome.
Nature communications814613(2017 Mar)
Bay?s ?,Collins MO,Reig-Viader R,Gou G,Goulding D,Izquierdo A,Choudhary JS,Emes RD,Grant SG

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

Deep mRNA sequencing analysis to capture the transcriptome landscape of zebrafish embryos and larvae.
PloS one8(5)e64058(2013)
Yang H,Zhou Y,Gu J,Xie S,Xu Y,Zhu G,Wang L,Huang J,Ma H,Yao J

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sel1l cDNA ORF clone, Danio rerio(zebrafish)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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