Gene Symbol | APA1 |
Entrez Gene ID | 837740 |
Full Name | aspartic proteinase A1 |
Synonyms | ATAPA1,F12F1.24,F12F1_24,aspartic proteinase A1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » APA1 cDNA ORF clone
Gene Symbol | APA1 |
Entrez Gene ID | 837740 |
Full Name | aspartic proteinase A1 |
Synonyms | ATAPA1,F12F1.24,F12F1_24,aspartic proteinase A1 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001332010.1 | NP_001322792.1 | aspartic proteinase A1 |
NM_101062.4 | NP_172655.1 | aspartic proteinase A1 |
Homo sapiens (human) | CTSD | NP_001900.1 |
Bos taurus (cattle) | CTSD | NP_001159993.1 |
Rattus norvegicus (Norway rat) | Ctsd | NP_599161.2 |
Gallus gallus (chicken) | CTSD | NP_990508.1 |
Danio rerio (zebrafish) | ctsd | NP_571785.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP003277 | XP_307784.1 |
Arabidopsis thaliana (thale cress) | AT1G62290 | NP_001031219.1 |
Mus musculus (house mouse) | Ctsd | NP_034113.1 |
Caenorhabditis elegans (roundworm) | asp-4 | NP_510191.1 |
Saccharomyces cerevisiae (baker's yeast) | PEP4 | NP_015171.1 |
Xenopus tropicalis (tropical clawed frog) | ctsd | NP_988964.1 |
Xenopus tropicalis (tropical clawed frog) | LOC613063 | NP_001136375.1 |
Canis lupus familiaris (dog) | CTSD | NP_001020792.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_00922 | XP_003718037.1 |
Neurospora crassa | NCU02273 | XP_959917.1 |
Arabidopsis thaliana (thale cress) | APA1 | NP_172655.1 |
Oryza sativa (rice) | Os05g0567100 | NP_001056348.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101735147 | XP_004914286.1 |
CTSD | XP_001091601.1 | |
Drosophila melanogaster (fruit fly) | cathD | NP_652013.1 |
Kluyveromyces lactis | KLLA0D05929g | XP_453326.1 |
Oryza sativa (rice) | Os01g0663400 | NP_001043786.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100489529 | XP_002938948.2 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data show that the mature form of the rAtAP A1 was a heterodimeric glycosylated protein with a molecular mass of 47kDa consisting of heavy and light chain components, approx. 32 and 16kDa, respectively, linked by disulfide bonds.
Title: Expression and characterization of the recombinant aspartic proteinase A1 from Arabidopsis thaliana.
The following APA1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the APA1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb23286 | |
Clone ID Related Accession (Same CDS sequence) | NM_101062.4 | |
Accession Version | NM_101062.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1521bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | aspartic proteinase A1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_101062.3. |
1 | ATGAAGATAT ACTCTAGAAC GGTTGCTGTT TCACTCATTG TGTCATTCCT CCTGTGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_172655.1 |
CDS | 175..1695 |
Translation |
Target ORF information:
Target ORF information:
|
NM_101062.4 |
1 | ATGAAGATAT ACTCTAGAAC GGTTGCTGTT TCACTCATTG TGTCATTCCT CCTGTGTTTC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb33440 | |
Clone ID Related Accession (Same CDS sequence) | NM_001332010.1 | |
Accession Version | NM_001332010.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1554bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | aspartic proteinase A1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGTATACAT ACTGGTTGAC TTTTATGGGT AAAATGAAGA TATACTCTAG AACGGTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001322792.1 |
CDS | 770..2323 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001332010.1 |
1 | ATGTATACAT ACTGGTTGAC TTTTATGGGT AAAATGAAGA TATACTCTAG AACGGTTGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |