ORF » Species Summary » Zonotrichia albicollis » OPTN cDNA ORF clone

OPTN cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow)

The following OPTN gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the OPTN cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OZo46419 XM_005489273.3
Latest version!		 Zonotrichia albicollis optineurin (OPTN), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OZo46420 XM_026794880.1
Latest version!		 Zonotrichia albicollis optineurin (OPTN), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OZo46421 XM_026794881.1
Latest version!		 Zonotrichia albicollis optineurin (OPTN), transcript variant X3, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OZo10930 XM_005489273.2
Latest version!		 Zonotrichia albicollis optineurin (OPTN), mRNA. pcDNA3.1-C-(k)DYK or customized vector TBD $342.30
$489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    OPTN ( XM_005489273.3 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_005489330.3 Zonotrichia albicollis optineurin (OPTN), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OZo46419
    Clone ID Related Accession (Same CDS sequence) XM_005489273.3
    Accession Version XM_005489273.3 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1662bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-10-14
    Organism Zonotrichia albicollis(white-throated sparrow)
    Product optineurin isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Oct 15, 2018 this sequence version replaced XM_005489273.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zonotrichia albicollis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATCAGGAGC 
    AAATCTGCAG ATGAATCGAA GAATTTGGAG TCTGAGGAGC TAACTGTGAG CCAGCTGCTC 
    TGCAGCCTTA GAAATGAAAC TCAGAAGAGG GAAAAACTTG AGGAGGAGCT GCAGGATCAC 
    AGAGAGAGAC TGTCAAAGCT GGAGAAGGAG ACCAGAAACT GCCAGGAGAG TGGGACACAA 
    ACTGAACAGG AAGAAGAGAG TTCAGAAGCT GTTGGCAGTG AAGTAGAAGC CCTGAATCTG 
    CAAGTTTGTG CTCTGTTTAA AGAGCTTCAG GAAGCCCATG AGAAGTTAAA AGAAGCAGAA 
    TTGATTCAGA AGAAGCTTCA AGAAAAGTGC CAGGTACTGG AAAGAAAAAG CTTGGCTGCT 
    GCATCAGAAT TGGAGGAGAA GCAGCAGCTG ATATACACCA TCAAGAAGCT GGAACTACAG 
    GTGGAGAGCA TGCAGGCAGA GGTCAAGCTG GAACAAGCCA AGACACATGA AGAAAAGACA 
    AGATACAATA ACCTCCAGGA TTCATATAGC AAGCTCCTTC CAGAACTCAC TGAGGCAAAG 
    AAAAAAATTG ATGAAATGAA ACTCAAAGAG CTGGACAGAG TAGATAAAGC TGTGGTGGAA 
    CAACTGACAG CAAAGGTGGA GTTGGCAGAA CAAGCCCTTG CTGCAAAGCA GCTCCAGATA 
    GATGAAATGA AGCAGCTAAT TGCTAAGCAA GAGGAGGACC TTGAAACTAT GTCTGTGCTC 
    CGTGCTCAGA TGGAGGTTTA TTGTTCTGAT TTCCATGCTG AGAGGGCAGC AAGAGAGAAG 
    ATCCATGAGG AGAAGGAGCA GTTGGCTGTC CAGCTGGCAT ACCTACTAAA AGAGCAACAA 
    AATTTTGAAG ACCTTGGCCG AAGCTCTCTG GCAGAGATGC AGAGTCGCCA CGGAGCCAGG 
    ATGCCGGATG GGGAGCGCTC ACCTCGCCTT GTCCAAAGAG GAACCAATAG TCAAGACTGG 
    CCAGAGCAGC GGAATATTTC TATTTACGCA TGCCCTAAAT GTGAAGAAAT TCTACCTGAT 
    TTGGACACAC TGCAGATTCA TGTTATGGAC TGCATTAATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005489330.3
    CDS84..1745
    Translation

    Target ORF information:

    RefSeq Version XM_005489273.3
    Organism Zonotrichia albicollis(white-throated sparrow)
    Definition Zonotrichia albicollis optineurin (OPTN), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005489273.3

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATCAGGAGC 
    AAATCTGCAG ATGAATCGAA GAATTTGGAG TCTGAGGAGC TAACTGTGAG CCAGCTGCTC 
    TGCAGCCTTA GAAATGAAAC TCAGAAGAGG GAAAAACTTG AGGAGGAGCT GCAGGATCAC 
    AGAGAGAGAC TGTCAAAGCT GGAGAAGGAG ACCAGAAACT GCCAGGAGAG TGGGACACAA 
    ACTGAACAGG AAGAAGAGAG TTCAGAAGCT GTTGGCAGTG AAGTAGAAGC CCTGAATCTG 
    CAAGTTTGTG CTCTGTTTAA AGAGCTTCAG GAAGCCCATG AGAAGTTAAA AGAAGCAGAA 
    TTGATTCAGA AGAAGCTTCA AGAAAAGTGC CAGGTACTGG AAAGAAAAAG CTTGGCTGCT 
    GCATCAGAAT TGGAGGAGAA GCAGCAGCTG ATATACACCA TCAAGAAGCT GGAACTACAG 
    GTGGAGAGCA TGCAGGCAGA GGTCAAGCTG GAACAAGCCA AGACACATGA AGAAAAGACA 
    AGATACAATA ACCTCCAGGA TTCATATAGC AAGCTCCTTC CAGAACTCAC TGAGGCAAAG 
    AAAAAAATTG ATGAAATGAA ACTCAAAGAG CTGGACAGAG TAGATAAAGC TGTGGTGGAA 
    CAACTGACAG CAAAGGTGGA GTTGGCAGAA CAAGCCCTTG CTGCAAAGCA GCTCCAGATA 
    GATGAAATGA AGCAGCTAAT TGCTAAGCAA GAGGAGGACC TTGAAACTAT GTCTGTGCTC 
    CGTGCTCAGA TGGAGGTTTA TTGTTCTGAT TTCCATGCTG AGAGGGCAGC AAGAGAGAAG 
    ATCCATGAGG AGAAGGAGCA GTTGGCTGTC CAGCTGGCAT ACCTACTAAA AGAGCAACAA 
    AATTTTGAAG ACCTTGGCCG AAGCTCTCTG GCAGAGATGC AGAGTCGCCA CGGAGCCAGG 
    ATGCCGGATG GGGAGCGCTC ACCTCGCCTT GTCCAAAGAG GAACCAATAG TCAAGACTGG 
    CCAGAGCAGC GGAATATTTC TATTTACGCA TGCCCTAAAT GTGAAGAAAT TCTACCTGAT 
    TTGGACACAC TGCAGATTCA TGTTATGGAC TGCATTAATT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    OPTN ( XM_026794880.1 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_026650681.1 Zonotrichia albicollis optineurin (OPTN), transcript variant X2, mRNA.
    Price & Availability↑
    CloneID OZo46420
    Clone ID Related Accession (Same CDS sequence) XM_026794880.1
    Accession Version XM_026794880.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1659bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-10-14
    Organism Zonotrichia albicollis(white-throated sparrow)
    Product optineurin isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zonotrichia albicollis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATGAGCAAA 
    TCTGCAGATG AATCGAAGAA TTTGGAGTCT GAGGAGCTAA CTGTGAGCCA GCTGCTCTGC 
    AGCCTTAGAA ATGAAACTCA GAAGAGGGAA AAACTTGAGG AGGAGCTGCA GGATCACAGA 
    GAGAGACTGT CAAAGCTGGA GAAGGAGACC AGAAACTGCC AGGAGAGTGG GACACAAACT 
    GAACAGGAAG AAGAGAGTTC AGAAGCTGTT GGCAGTGAAG TAGAAGCCCT GAATCTGCAA 
    GTTTGTGCTC TGTTTAAAGA GCTTCAGGAA GCCCATGAGA AGTTAAAAGA AGCAGAATTG 
    ATTCAGAAGA AGCTTCAAGA AAAGTGCCAG GTACTGGAAA GAAAAAGCTT GGCTGCTGCA 
    TCAGAATTGG AGGAGAAGCA GCAGCTGATA TACACCATCA AGAAGCTGGA ACTACAGGTG 
    GAGAGCATGC AGGCAGAGGT CAAGCTGGAA CAAGCCAAGA CACATGAAGA AAAGACAAGA 
    TACAATAACC TCCAGGATTC ATATAGCAAG CTCCTTCCAG AACTCACTGA GGCAAAGAAA 
    AAAATTGATG AAATGAAACT CAAAGAGCTG GACAGAGTAG ATAAAGCTGT GGTGGAACAA 
    CTGACAGCAA AGGTGGAGTT GGCAGAACAA GCCCTTGCTG CAAAGCAGCT CCAGATAGAT 
    GAAATGAAGC AGCTAATTGC TAAGCAAGAG GAGGACCTTG AAACTATGTC TGTGCTCCGT 
    GCTCAGATGG AGGTTTATTG TTCTGATTTC CATGCTGAGA GGGCAGCAAG AGAGAAGATC 
    CATGAGGAGA AGGAGCAGTT GGCTGTCCAG CTGGCATACC TACTAAAAGA GCAACAAAAT 
    TTTGAAGACC TTGGCCGAAG CTCTCTGGCA GAGATGCAGA GTCGCCACGG AGCCAGGATG 
    CCGGATGGGG AGCGCTCACC TCGCCTTGTC CAAAGAGGAA CCAATAGTCA AGACTGGCCA 
    GAGCAGCGGA ATATTTCTAT TTACGCATGC CCTAAATGTG AAGAAATTCT ACCTGATTTG 
    GACACACTGC AGATTCATGT TATGGACTGC ATTAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026650681.1
    CDS84..1742
    Translation

    Target ORF information:

    RefSeq Version XM_026794880.1
    Organism Zonotrichia albicollis(white-throated sparrow)
    Definition Zonotrichia albicollis optineurin (OPTN), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026794880.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATGAGCAAA 
    TCTGCAGATG AATCGAAGAA TTTGGAGTCT GAGGAGCTAA CTGTGAGCCA GCTGCTCTGC 
    AGCCTTAGAA ATGAAACTCA GAAGAGGGAA AAACTTGAGG AGGAGCTGCA GGATCACAGA 
    GAGAGACTGT CAAAGCTGGA GAAGGAGACC AGAAACTGCC AGGAGAGTGG GACACAAACT 
    GAACAGGAAG AAGAGAGTTC AGAAGCTGTT GGCAGTGAAG TAGAAGCCCT GAATCTGCAA 
    GTTTGTGCTC TGTTTAAAGA GCTTCAGGAA GCCCATGAGA AGTTAAAAGA AGCAGAATTG 
    ATTCAGAAGA AGCTTCAAGA AAAGTGCCAG GTACTGGAAA GAAAAAGCTT GGCTGCTGCA 
    TCAGAATTGG AGGAGAAGCA GCAGCTGATA TACACCATCA AGAAGCTGGA ACTACAGGTG 
    GAGAGCATGC AGGCAGAGGT CAAGCTGGAA CAAGCCAAGA CACATGAAGA AAAGACAAGA 
    TACAATAACC TCCAGGATTC ATATAGCAAG CTCCTTCCAG AACTCACTGA GGCAAAGAAA 
    AAAATTGATG AAATGAAACT CAAAGAGCTG GACAGAGTAG ATAAAGCTGT GGTGGAACAA 
    CTGACAGCAA AGGTGGAGTT GGCAGAACAA GCCCTTGCTG CAAAGCAGCT CCAGATAGAT 
    GAAATGAAGC AGCTAATTGC TAAGCAAGAG GAGGACCTTG AAACTATGTC TGTGCTCCGT 
    GCTCAGATGG AGGTTTATTG TTCTGATTTC CATGCTGAGA GGGCAGCAAG AGAGAAGATC 
    CATGAGGAGA AGGAGCAGTT GGCTGTCCAG CTGGCATACC TACTAAAAGA GCAACAAAAT 
    TTTGAAGACC TTGGCCGAAG CTCTCTGGCA GAGATGCAGA GTCGCCACGG AGCCAGGATG 
    CCGGATGGGG AGCGCTCACC TCGCCTTGTC CAAAGAGGAA CCAATAGTCA AGACTGGCCA 
    GAGCAGCGGA ATATTTCTAT TTACGCATGC CCTAAATGTG AAGAAATTCT ACCTGATTTG 
    GACACACTGC AGATTCATGT TATGGACTGC ATTAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    OPTN ( XM_026794881.1 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_026650682.1 Zonotrichia albicollis optineurin (OPTN), transcript variant X3, mRNA.
    Price & Availability↑
    CloneID OZo46421
    Clone ID Related Accession (Same CDS sequence) XM_026794881.1
    Accession Version XM_026794881.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1659bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-10-14
    Organism Zonotrichia albicollis(white-throated sparrow)
    Product optineurin isoform X3
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zonotrichia albicollis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATCAGGAGC 
    AAATCTGCAG ATGAATCGAA GAATTTGGAG TCTGAGGAGC TAACTGTGAG CCAGCTGCTC 
    TGCAGCCTTA GAAATGAAAC TCAGAAGAGG GAAAAACTTG AGGAGGAGCT GCAGGATCAC 
    AGAGAGAGAC TGTCAAAGCT GGAGAAGGAG ACCAGAAACT GCCAGGAGAG TGGGACACAA 
    ACTGAACAGG AAGAAGAGAG TTCAGAAGCT GTTGGCAGTG AAGTAGAAGC CCTGAATCTG 
    CAAGTTTGTG CTCTGTTTAA AGAGCTTCAG GAAGCCCATG AGAAGTTAAA AGAAGCAGAA 
    TTGATTCAGA AGAAGCTTCA AGAAAAGTGC CAGGTACTGG AAAGAAAAAG CTTGGCTGCT 
    GCATCAGAAT TGGAGGAGAA GCAGCAGCTG ATATACACCA TCAAGAAGCT GGAACTACAG 
    GTGGAGAGCA TGCAGGCAGA GGTCAAGCTG GAACAAGCCA AGACACATGA AGAAAAGACA 
    AGATACAATA ACCTCCAGGA TTCATATAGC AAGCTCCTTC CAGAACTCAC TGAGGCAAAG 
    AAAAAAATTG ATGAAATGAA ACTCAAAGAG CTGGACAGAG TAGATAAAGC TGTGGTGGAA 
    CAACTGACAG CAAAGGTGGA GTTGGCAGAA CAAGCCCTTG CTGCAAAGCA GCTCCAGATA 
    GATGAAATGA AGCAGCTAAT TGCTAAGCAA GAGGAGGACC TTGAAACTAT GTCTGTGCTC 
    CGTGCTCAGA TGGAGGTTTA TTGTTCTGAT TTCCATGCTG AGAGGGCAGC AAGAGAGAAG 
    ATCCATGAGG AGAAGGAGCA GTTGGCTGTC CAGCTGGCAT ACCTACTAAA AGAGCAACAA 
    AATTTTGAAG ACCTTGGCCG CTCTCTGGCA GAGATGCAGA GTCGCCACGG AGCCAGGATG 
    CCGGATGGGG AGCGCTCACC TCGCCTTGTC CAAAGAGGAA CCAATAGTCA AGACTGGCCA 
    GAGCAGCGGA ATATTTCTAT TTACGCATGC CCTAAATGTG AAGAAATTCT ACCTGATTTG 
    GACACACTGC AGATTCATGT TATGGACTGC ATTAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_026650682.1
    CDS84..1742
    Translation

    Target ORF information:

    RefSeq Version XM_026794881.1
    Organism Zonotrichia albicollis(white-throated sparrow)
    Definition Zonotrichia albicollis optineurin (OPTN), transcript variant X3, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_026794881.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCAGCA AGTCGAAGGG CCGTCCTGCT GAAAATGGAG AGCATTCCAA GAGTAAAATG 
    GAAAACGGAA TGGACAGCAT GGCAGCCCCA GCCCTTAACA CCTACACCCC GGAAGAGATG 
    GTGCAACAGA TGAAAGAACT AATCACTGAG AACAATGAGT TAAAAGAAGC CATGAAGTTG 
    CACAACCAAG CTATGAAGGA CCGATATGAG GAACTTTCCA CCTGGAGAGA GAAGCAGAAA 
    GAAGAGCGAG AATTTTATGA GTTAAAGTTT AAGGAGGCAA AGCAGTGCTT GCAGGCCAAG 
    TGCATTGAAA ATGAACAGCT ACAGCAGCAA CTTCAGAGCC TAAAGGAAAG AGAAGAAGGA 
    GCTGAAATGG AGGCTCCCGA GAAGGAGGTG AGGCAGCTGA AGGCCCAGGT GCAGCGGCTC 
    CAGGCTGAGA AGGCAGATCT GCTCGCCATC ATTTCAGAGC TGCAGCTCAA GCTGAACATC 
    TCAGCAGAGG ATTCCTTTGT GGAGATTGGG ATGAATGAAG GGGAAATAAA TAGAACTGCA 
    AAGGAACATC AAGAGAATAG TGGTGAAATG CCCAGTGATG TTGCTGTCTA CATCAGGAGC 
    AAATCTGCAG ATGAATCGAA GAATTTGGAG TCTGAGGAGC TAACTGTGAG CCAGCTGCTC 
    TGCAGCCTTA GAAATGAAAC TCAGAAGAGG GAAAAACTTG AGGAGGAGCT GCAGGATCAC 
    AGAGAGAGAC TGTCAAAGCT GGAGAAGGAG ACCAGAAACT GCCAGGAGAG TGGGACACAA 
    ACTGAACAGG AAGAAGAGAG TTCAGAAGCT GTTGGCAGTG AAGTAGAAGC CCTGAATCTG 
    CAAGTTTGTG CTCTGTTTAA AGAGCTTCAG GAAGCCCATG AGAAGTTAAA AGAAGCAGAA 
    TTGATTCAGA AGAAGCTTCA AGAAAAGTGC CAGGTACTGG AAAGAAAAAG CTTGGCTGCT 
    GCATCAGAAT TGGAGGAGAA GCAGCAGCTG ATATACACCA TCAAGAAGCT GGAACTACAG 
    GTGGAGAGCA TGCAGGCAGA GGTCAAGCTG GAACAAGCCA AGACACATGA AGAAAAGACA 
    AGATACAATA ACCTCCAGGA TTCATATAGC AAGCTCCTTC CAGAACTCAC TGAGGCAAAG 
    AAAAAAATTG ATGAAATGAA ACTCAAAGAG CTGGACAGAG TAGATAAAGC TGTGGTGGAA 
    CAACTGACAG CAAAGGTGGA GTTGGCAGAA CAAGCCCTTG CTGCAAAGCA GCTCCAGATA 
    GATGAAATGA AGCAGCTAAT TGCTAAGCAA GAGGAGGACC TTGAAACTAT GTCTGTGCTC 
    CGTGCTCAGA TGGAGGTTTA TTGTTCTGAT TTCCATGCTG AGAGGGCAGC AAGAGAGAAG 
    ATCCATGAGG AGAAGGAGCA GTTGGCTGTC CAGCTGGCAT ACCTACTAAA AGAGCAACAA 
    AATTTTGAAG ACCTTGGCCG CTCTCTGGCA GAGATGCAGA GTCGCCACGG AGCCAGGATG 
    CCGGATGGGG AGCGCTCACC TCGCCTTGTC CAAAGAGGAA CCAATAGTCA AGACTGGCCA 
    GAGCAGCGGA ATATTTCTAT TTACGCATGC CCTAAATGTG AAGAAATTCT ACCTGATTTG 
    GACACACTGC AGATTCATGT TATGGACTGC ATTAATTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    OPTN ( XM_005489273.2 ) cDNA ORF clone, Zonotrichia albicollis(white-throated sparrow) -> XP_005489330.2 Zonotrichia albicollis optineurin (OPTN), mRNA.
    Price & Availability↑
    CloneID OZo10930
    Clone ID Related Accession (Same CDS sequence) XM_005489273.2
    Accession Version XM_005489273.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1881bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-09-20
    Organism Zonotrichia albicollis(white-throated sparrow)
    Product optineurin
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_005081613.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 21, 2015 this sequence version replaced XM_005489273.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Zonotrichia albicollis Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGGGGGACT TGGTTCCCGC CCCGCCAGGC CGGCGGCCCT CAGGGCAGCA GCCGGGAAAG 
    CGAGAAGGAA GCGAACGCGG CGTGCCCGGG AGGCGGCGGG AGGAGCGGGG CTGGGAAGTC 
    CCCGCGGAGG CGGAGGCGGA GGCGGGGACG GCGGGGGAGG GCGGGCACTC CGTCCGTCAG 
    CTGAGCGGCC ATGGGCGCGC CGTGAGGGCT GCTTCAGAGA TGTCCAGCAA GTCGAAGGGC 
    CGTCCTGCTG AAAATGGAGA GCATTCCAAG AGTAAAATGG AAAACGGAAT GGACAGCATG 
    GCAGCCCCAG CCCTTAACAC CTACACCCCG GAAGAGATGG TGCAACAGAT GAAAGAACTA 
    ATCACTGAGA ACAATGAGTT AAAAGAAGCC ATGAAGTTGC ACAACCAAGC TATGAAGGAC 
    CGATATGAGG AACTTTCCAC CTGGAGAGAG AAGCAGAAAG AAGAGCGAGA ATTTTATGAG 
    TTAAAGTTTA AGGAGGCAAA GCAGTGCTTG CAGGCCAAGT GCATTGAAAA TGAACAGCTA 
    CAGCAGCAAC TTCAGAGCCT AAAGGAAAGA GAAGAAGGAG CTGAAATGGA GGCTCCCGAG 
    AAGGAGGTGA GGCAGCTGAA GGCCCAGGTG CAGCGGCTCC AGGCTGAGAA GGCAGATCTG 
    CTCGCCATCA TTTCAGAGCT GCAGCTCAAG CTGAACATCT CAGCAGAGGA TTCCTTTGTG 
    GAGATTGGGA TGAATGAAGG GGAAATAAAT AGAACTGCAA AGGAACATCA AGAGAATAGT 
    GGTGAAATGC CCAGTGATGT TGCTGTCTAC ATCAGGAGCA AATCTGCAGA TGAATCGAAG 
    AATTTGGAGT CTGAGGAGCT AACTGTGAGC CAGCTGCTCT GCAGCCTTAG AAATGAAACT 
    CAGAAGAGGG AAAAACTTGA GGAGGAGCTG CAGGATCACA GAGAGAGACT GTCAAAGCTG 
    GAGAAGGAGA CCAGAAACTG CCAGGAGAGT GGGACACAAA CTGAACAGGA AGAAGAGAGT 
    TCAGAAGCTG TTGGCAGTGA AGTAGAAGCC CTGAATCTGC AAGTTTGTGC TCTGTTTAAA 
    GAGCTTCAGG AAGCCCATGA GAAGTTAAAA GAAGCAGAAT TGATTCAGAA GAAGCTTCAA 
    GAAAAGTGCC AGGTACTGGA AAGAAAAAGC TTGGCTGCTG CATCAGAATT GGAGGAGAAG 
    CAGCAGCTGA TATACACCAT CAAGAAGCTG GAACTACAGG TGGAGAGCAT GCAGGCAGAG 
    GTCAAGCTGG AACAAGCCAA GACACATGAA GAAAAGACAA GATACAATAA CCTCCAGGAT 
    TCATATAGCA AGCTCCTTCC AGAACTCACT GAGGCAAAGA AAAAAATTGA TGAAATGAAA 
    CTCAAAGAGC TGGACAGAGT AGATAAAGCT GTGGTGGAAC AACTGACAGC AAAGGTGGAG 
    TTGGCAGAAC AAGCCCTTGC TGCAAAGCAG CTCCAGATAG ATGAAATGAA GCAGCTAATT 
    GCTAAGCAAG AGGAGGACCT TGAAACTATG TCTGTGCTCC GTGCTCAGAT GGAGGTTTAT 
    TGTTCTGATT TCCATGCTGA GAGGGCAGCA AGAGAGAAGA TCCATGAGGA GAAGGAGCAG 
    TTGGCTGTCC AGCTGGCATA CCTACTAAAA GAGCAACAAA ATTTTGAAGA CCTTGGCCGA 
    AGCTCTCTGG CAGAGATGCA GAGTCGCCAC GGAGCCAGGA TGCCGGATGG GGAGCGCTCA 
    CCTCGCCTTG TCCAAAGAGG AACCAATAGT CAAGACTGGC CAGAGCAGCG GAATATTTCT 
    ATTTACGCAT GCCCTAAATG TGAAGAAATT CTACCTGATT TGGACACACT GCAGATTCAT 
    GTTATGGACT GCATTAATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_005489330.2
    CDS22..1902
    Translation

    Target ORF information:

    RefSeq Version XM_005489273.2
    Organism Zonotrichia albicollis(white-throated sparrow)
    Definition Zonotrichia albicollis optineurin (OPTN), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_005489273.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    ATGGGGGACT TGGTTCCCGC CCCGCCAGGC CGGCGGCCCT CAGGGCAGCA GCCGGGAAAG 
    CGAGAAGGAA GCGAACGCGG CGTGCCCGGG AGGCGGCGGG AGGAGCGGGG CTGGGAAGTC 
    CCCGCGGAGG CGGAGGCGGA GGCGGGGACG GCGGGGGAGG GCGGGCACTC CGTCCGTCAG 
    CTGAGCGGCC ATGGGCGCGC CGTGAGGGCT GCTTCAGAGA TGTCCAGCAA GTCGAAGGGC 
    CGTCCTGCTG AAAATGGAGA GCATTCCAAG AGTAAAATGG AAAACGGAAT GGACAGCATG 
    GCAGCCCCAG CCCTTAACAC CTACACCCCG GAAGAGATGG TGCAACAGAT GAAAGAACTA 
    ATCACTGAGA ACAATGAGTT AAAAGAAGCC ATGAAGTTGC ACAACCAAGC TATGAAGGAC 
    CGATATGAGG AACTTTCCAC CTGGAGAGAG AAGCAGAAAG AAGAGCGAGA ATTTTATGAG 
    TTAAAGTTTA AGGAGGCAAA GCAGTGCTTG CAGGCCAAGT GCATTGAAAA TGAACAGCTA 
    CAGCAGCAAC TTCAGAGCCT AAAGGAAAGA GAAGAAGGAG CTGAAATGGA GGCTCCCGAG 
    AAGGAGGTGA GGCAGCTGAA GGCCCAGGTG CAGCGGCTCC AGGCTGAGAA GGCAGATCTG 
    CTCGCCATCA TTTCAGAGCT GCAGCTCAAG CTGAACATCT CAGCAGAGGA TTCCTTTGTG 
    GAGATTGGGA TGAATGAAGG GGAAATAAAT AGAACTGCAA AGGAACATCA AGAGAATAGT 
    GGTGAAATGC CCAGTGATGT TGCTGTCTAC ATCAGGAGCA AATCTGCAGA TGAATCGAAG 
    AATTTGGAGT CTGAGGAGCT AACTGTGAGC CAGCTGCTCT GCAGCCTTAG AAATGAAACT 
    CAGAAGAGGG AAAAACTTGA GGAGGAGCTG CAGGATCACA GAGAGAGACT GTCAAAGCTG 
    GAGAAGGAGA CCAGAAACTG CCAGGAGAGT GGGACACAAA CTGAACAGGA AGAAGAGAGT 
    TCAGAAGCTG TTGGCAGTGA AGTAGAAGCC CTGAATCTGC AAGTTTGTGC TCTGTTTAAA 
    GAGCTTCAGG AAGCCCATGA GAAGTTAAAA GAAGCAGAAT TGATTCAGAA GAAGCTTCAA 
    GAAAAGTGCC AGGTACTGGA AAGAAAAAGC TTGGCTGCTG CATCAGAATT GGAGGAGAAG 
    CAGCAGCTGA TATACACCAT CAAGAAGCTG GAACTACAGG TGGAGAGCAT GCAGGCAGAG 
    GTCAAGCTGG AACAAGCCAA GACACATGAA GAAAAGACAA GATACAATAA CCTCCAGGAT 
    TCATATAGCA AGCTCCTTCC AGAACTCACT GAGGCAAAGA AAAAAATTGA TGAAATGAAA 
    CTCAAAGAGC TGGACAGAGT AGATAAAGCT GTGGTGGAAC AACTGACAGC AAAGGTGGAG 
    TTGGCAGAAC AAGCCCTTGC TGCAAAGCAG CTCCAGATAG ATGAAATGAA GCAGCTAATT 
    GCTAAGCAAG AGGAGGACCT TGAAACTATG TCTGTGCTCC GTGCTCAGAT GGAGGTTTAT 
    TGTTCTGATT TCCATGCTGA GAGGGCAGCA AGAGAGAAGA TCCATGAGGA GAAGGAGCAG 
    TTGGCTGTCC AGCTGGCATA CCTACTAAAA GAGCAACAAA ATTTTGAAGA CCTTGGCCGA 
    AGCTCTCTGG CAGAGATGCA GAGTCGCCAC GGAGCCAGGA TGCCGGATGG GGAGCGCTCA 
    CCTCGCCTTG TCCAAAGAGG AACCAATAGT CAAGACTGGC CAGAGCAGCG GAATATTTCT 
    ATTTACGCAT GCCCTAAATG TGAAGAAATT CTACCTGATT TGGACACACT GCAGATTCAT 
    GTTATGGACT GCATTAATTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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