ORF » Species Summary » Trichoderma atroviride IMI 206040 » TRIATDRAFT_296439 cDNA ORF clone

TRIATDRAFT_296439 cDNA ORF clone, Trichoderma atroviride IMI 206040

The following TRIATDRAFT_296439 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TRIATDRAFT_296439 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OTr01034 XM_014083169.1
Latest version!		 Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $258.30
$369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    TRIATDRAFT_296439 ( XM_014083169.1 ) cDNA ORF clone, Trichoderma atroviride IMI 206040 -> XP_013938644.1 Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA.
    Price & Availability↑
    CloneID OTr01034
    Clone ID Related Accession (Same CDS sequence) XM_014083169.1
    Accession Version XM_014083169.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1428bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-09-13
    Organism Trichoderma atroviride IMI 206040
    Product hypothetical protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_014013628). ##Metadata-START## Organism Display Name :: Trichoderma atroviride IMI 206040 GOLD Stamp ID :: Gi01368 ##Metadata-END## COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCAA AGGTGGTGTC GACGGTCGTC CGCCTCGGCG ATATATCGTA CTACATGCAC 
    CCTTTGGCCC CTTCTGTTTA CCGGCTGTAC CCAGATACTG CAGATGCTTT TATAGTCTCT 
    ACCGTTCCAG ATGATGGCGA TGGCTTTCGA TCTCTAGATG TTTCCGCGTA CGGAGAACAG 
    TTTCCATCCG CTCTCACTGT CGCCGTACCC TCTCGACTAT ACTATACCAA ATCAACGGAG 
    AAGCCGTATG CTGGTCTTCG CGTAGCAATA AAAGACATTA TAGATTTGAA AGGGCTCAAG 
    ACGGGAGCTT CTTCGCGGGC GTACACGGAG CTCTATCCGG CCAAAGAAGA AAGCGCAGAA 
    ATAGTCCAGC GGCTTATCAA ATTGGGCTTT GTGATTGTTG GAAAGCTAAA GACTACACAA 
    TTTGCAGATT CGGAATGGCC AACCAGAGAC TGGGTCGACT ACCATGGACC TTGGAATCCG 
    CGTGGAGACG GCTATCTCAC GCCCAGCGGA AGCAGTGCTG GCAGCGCTTC CGCTGTTTCT 
    ACGTATACGT GGCTTGATGT GTCCTTGGGC ACAGATACTT TGGGGAGCAT CAGATCACCT 
    TCAGCAGCTC AGGGAATTTT CGGAATGAGG CCCACTCTTG GGGCCGCAAA CACCACAGGT 
    GTAGTCCCAT ACAGCTCCAA CTGGGACACG GTTGGTGGAT TTGCCCGCAC GGCAGCGGAA 
    TTCAAGACTC TCGCACAAGC ACTATACGGC TCAGCAGAGA CCGAAGGAAA AGTTTACGAG 
    AAGCCAAATA AGTTAATCTG CTTGGCCGAC TACTGGCCAG TTGAGCATGA AGAAAGCCAG 
    CGAGTCATGG AAAATTTTAT CAAGCGCGTT GAAAGCTTTC TAGGAGTAAA TCGTACGAAT 
    ATCAATCTCG CAGACACATG GACTCGAACT CGTCCAGAAG GGACAGATGA ATCCATCAGC 
    AAGTATTTTC ATCACGCCTT CGACTGGTCT GCCAACCGTG ATCAGTGGAC AGGACTTCTT 
    CAGCCTTTCA TCAAAGAATA CACGCATAAG ATGGGCAAAC CACCCGTCCT CAATCCACAG 
    GTTCGATTTA AAGTGGATGG CTACTCTAGC AGTATCATCG TTCTCCCCTG GACGGATGGC 
    CAGCCTGTCT ACAGAGATGA GTATAAGAGC GGGCCACAAG AGTTTACAGG CCAGGGTTTC 
    TTTTTTTACA ACGTAGGCCC TTATGCTCAA TGTCCGGAGC TCATTTTTCC TGTCGGTACC 
    ACGCCATACA CCTCGAAGTT CACGCAAAGG ATCGAACAGC TTCCTGCCGC TGTTGGATTC 
    ATAGCTGCTA AAGGTAGCGA CATCATGCTG GCTGATTTCG TCAGTAAACT CTTTGAGGAT 
    TCATATACTG TCATTGAAGC GGAGCAAGAT CAAGCCCCTC TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_013938644.1
    CDS1..1428
    Translation

    Target ORF information:

    RefSeq Version XM_014083169.1
    Organism Trichoderma atroviride IMI 206040
    Definition Trichoderma atroviride IMI 206040 hypothetical protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_014083169.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGCTGCAA AGGTGGTGTC GACGGTCGTC CGCCTCGGCG ATATATCGTA CTACATGCAC 
    CCTTTGGCCC CTTCTGTTTA CCGGCTGTAC CCAGATACTG CAGATGCTTT TATAGTCTCT 
    ACCGTTCCAG ATGATGGCGA TGGCTTTCGA TCTCTAGATG TTTCCGCGTA CGGAGAACAG 
    TTTCCATCCG CTCTCACTGT CGCCGTACCC TCTCGACTAT ACTATACCAA ATCAACGGAG 
    AAGCCGTATG CTGGTCTTCG CGTAGCAATA AAAGACATTA TAGATTTGAA AGGGCTCAAG 
    ACGGGAGCTT CTTCGCGGGC GTACACGGAG CTCTATCCGG CCAAAGAAGA AAGCGCAGAA 
    ATAGTCCAGC GGCTTATCAA ATTGGGCTTT GTGATTGTTG GAAAGCTAAA GACTACACAA 
    TTTGCAGATT CGGAATGGCC AACCAGAGAC TGGGTCGACT ACCATGGACC TTGGAATCCG 
    CGTGGAGACG GCTATCTCAC GCCCAGCGGA AGCAGTGCTG GCAGCGCTTC CGCTGTTTCT 
    ACGTATACGT GGCTTGATGT GTCCTTGGGC ACAGATACTT TGGGGAGCAT CAGATCACCT 
    TCAGCAGCTC AGGGAATTTT CGGAATGAGG CCCACTCTTG GGGCCGCAAA CACCACAGGT 
    GTAGTCCCAT ACAGCTCCAA CTGGGACACG GTTGGTGGAT TTGCCCGCAC GGCAGCGGAA 
    TTCAAGACTC TCGCACAAGC ACTATACGGC TCAGCAGAGA CCGAAGGAAA AGTTTACGAG 
    AAGCCAAATA AGTTAATCTG CTTGGCCGAC TACTGGCCAG TTGAGCATGA AGAAAGCCAG 
    CGAGTCATGG AAAATTTTAT CAAGCGCGTT GAAAGCTTTC TAGGAGTAAA TCGTACGAAT 
    ATCAATCTCG CAGACACATG GACTCGAACT CGTCCAGAAG GGACAGATGA ATCCATCAGC 
    AAGTATTTTC ATCACGCCTT CGACTGGTCT GCCAACCGTG ATCAGTGGAC AGGACTTCTT 
    CAGCCTTTCA TCAAAGAATA CACGCATAAG ATGGGCAAAC CACCCGTCCT CAATCCACAG 
    GTTCGATTTA AAGTGGATGG CTACTCTAGC AGTATCATCG TTCTCCCCTG GACGGATGGC 
    CAGCCTGTCT ACAGAGATGA GTATAAGAGC GGGCCACAAG AGTTTACAGG CCAGGGTTTC 
    TTTTTTTACA ACGTAGGCCC TTATGCTCAA TGTCCGGAGC TCATTTTTCC TGTCGGTACC 
    ACGCCATACA CCTCGAAGTT CACGCAAAGG ATCGAACAGC TTCCTGCCGC TGTTGGATTC 
    ATAGCTGCTA AAGGTAGCGA CATCATGCTG GCTGATTTCG TCAGTAAACT CTTTGAGGAT 
    TCATATACTG TCATTGAAGC GGAGCAAGAT CAAGCCCCTC TTACTTAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma.
    Genome biology12(4)R40(2011)
    Kubicek CP,Herrera-Estrella A,Seidl-Seiboth V,Martinez DA,Druzhinina IS,Thon M,Zeilinger S,Casas-Flores S,Horwitz BA,Mukherjee PK,Mukherjee M,Kredics L,Alcaraz LD,Aerts A,Antal Z,Atanasova L,Cervantes-Badillo MG,Challacombe J,Chertkov O,McCluskey K,Coulpier F,Deshpande N,von D?hren H,Ebbole DJ,Esquivel-Naranjo EU,Fekete E,Flipphi M,Glaser F,G?mez-Rodr?guez EY,Gruber S,Han C,Henrissat B,Hermosa R,Hern?ndez-O?ate M,Karaffa L,Kosti I,Le Crom S,Lindquist E,Lucas S,L?beck M,L?beck PS,Margeot A,Metz B,Misra M,Nevalainen H,Omann M,Packer N,Perrone G,Uresti-Rivera EE,Salamov A,Schmoll M,Seiboth B,Shapiro H,Sukno S,Tamayo-Ramos JA,Tisch D,Wiest A,Wilkinson HH,Zhang M,Coutinho PM,Kenerley CM,Monte E,Baker SE,Grigoriev IV


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