Gene Symbol | MINDY3 |
Entrez Gene ID | 699009 |
Full Name | MINDY lysine 48 deubiquitinase 3 |
Synonyms | C9H10orf97,FAM188A |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » MINDY3 cDNA ORF clone
Gene Symbol | MINDY3 |
Entrez Gene ID | 699009 |
Full Name | MINDY lysine 48 deubiquitinase 3 |
Synonyms | C9H10orf97,FAM188A |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015146476.2 | XP_015001962.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X2 |
XM_015146475.1 | XP_015001961.1 | protein FAM188A isoform X1 |
XM_015146477.1 | XP_015001963.1 | protein FAM188A isoform X3 |
XM_015146475.2 | XP_015001961.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1 |
XM_015146477.2 | XP_015001963.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X3 |
XM_028853331.1 | XP_028709164.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X4 |
XM_028853332.1 | XP_028709165.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X5 |
XM_015146476.1 | XP_015001962.1 | protein FAM188A isoform X2 |
NM_001193862.1 | NP_001180791.1 | ubiquitin carboxyl-terminal hydrolase MINDY-3 |
Canis lupus familiaris (dog) | FAM188A | XP_544246.2 |
Rattus norvegicus (Norway rat) | Fam188a | NP_001099592.1 |
Gallus gallus (chicken) | FAM188A | XP_418629.1 |
Danio rerio (zebrafish) | fam188a | NP_001071224.1 |
Xenopus tropicalis (tropical clawed frog) | fam188a | NP_001001204.1 |
Homo sapiens (human) | FAM188A | NP_079224.1 |
Bos taurus (cattle) | FAM188A | NP_001069575.1 |
Drosophila melanogaster (fruit fly) | CG7332 | NP_573338.1 |
Pan troglodytes (chimpanzee) | FAM188A | XP_507672.2 |
FAM188A | XP_001089898.1 | |
Arabidopsis thaliana (thale cress) | AT1G43690 | NP_175034.1 |
Oryza sativa (rice) | Os04g0421800 | NP_001052786.1 |
Mus musculus (house mouse) | Fam188a | NP_077147.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP000412 | XP_310686.5 |
A new rhesus macaque assembly and annotation for next-generation sequencing analyses.
Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Mar?ais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA, Norgren RB Jr
Biology direct9(1)20(2014 Oct)
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques.
Yan G, Zhang G, Fang X, Zhang Y, Li C, Ling F, Cooper DN, Li Q, Li Y, van Gool AJ, Du H, Chen J, Chen R, Zhang P, Huang Z, Thompson JR, Meng Y, Bai Y, Wang J, Zhuo M, Wang T, Huang Y, Wei L, Li J, Wang Z, Hu H, Yang P, Le L, Stenson PD, Li B, Liu X, Ball EV, An N, Huang Q, Zhang Y, Fan W, Zhang X, Li Y, Wang W, Katze MG, Su B, Nielsen R, Yang H, Wang J, Wang X, Wang J
Nature biotechnology29(11)1019-23(2011 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following MINDY3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MINDY3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb02018 | |
Clone ID Related Accession (Same CDS sequence) | NM_001193862.1 | |
Accession Version | NM_001193862.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1338bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-11 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from QNVO02000483.1. On Aug 11, 2010 this sequence version replaced XM_001089898.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: SRR5038768.328412.1, SRR3476739.442272.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA4688315, SAMEA4688316 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001180791.1 |
CDS | 231..1568 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001193862.1 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39032 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146475.1 , XM_015146475.2 | |
Accession Version | XM_015146475.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | protein FAM188A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805153.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001961.1 |
CDS | 239..1504 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146475.1 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39032 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146475.1 , XM_015146475.2 | |
Accession Version | XM_015146475.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1266bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015146475.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001961.1 |
CDS | 237..1502 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146475.2 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39033 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146476.2 , XM_015146476.1 | |
Accession Version | XM_015146476.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015146476.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001962.1 |
CDS | 236..1492 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146476.2 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39033 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146476.2 , XM_015146476.1 | |
Accession Version | XM_015146476.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1257bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | protein FAM188A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805153.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001962.1 |
CDS | 239..1495 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146476.1 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39034 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146477.1 , XM_015146477.2 | |
Accession Version | XM_015146477.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | protein FAM188A isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_014805153.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001963.1 |
CDS | 240..1268 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146477.1 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb39034 | |
Clone ID Related Accession (Same CDS sequence) | XM_015146477.1 , XM_015146477.2 | |
Accession Version | XM_015146477.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2019 this sequence version replaced XM_015146477.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015001963.1 |
CDS | 237..1265 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015146477.2 |
1 | ATGTCCGAAC TGACTAAAGA GCTGATGGAG CTGGTGTGGG GCACCAAGAG CAGCCCGGGT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb92047 | |
Clone ID Related Accession (Same CDS sequence) | XM_028853331.1 | |
Accession Version | XM_028853331.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 897bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGAGGT TCCCTGCCAA AAAAAGATCA TTCAGAAGTT TACCAGAATT AAAAGATGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028709164.1 |
CDS | 286..1182 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028853331.1 |
1 | ATGAAGAGGT TCCCTGCCAA AAAAAGATCA TTCAGAAGTT TACCAGAATT AAAAGATGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb92048 | |
Clone ID Related Accession (Same CDS sequence) | XM_028853332.1 | |
Accession Version | XM_028853332.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 819bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041762.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGGGAA ATAAATTTGG AGTATTGCTT TTTCTGTATT CTGTATTACT GACAAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028709165.1 |
CDS | 701..1519 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028853332.1 |
1 | ATGTGGGGAA ATAAATTTGG AGTATTGCTT TTTCTGTATT CTGTATTACT GACAAAGGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A new rhesus macaque assembly and annotation for next-generation sequencing analyses. |
Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. |