nop53 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	nop53
Entrez Gene ID	322404
Full Name	NOP53 ribosome biogenesis factor
Synonyms	fb60b03,gltscr2,wu:fb60b03,zgc:123178
General protein information	Preferred Names NOP53 ribosome biogenesis factor Names glioma tumor suppressor candidate region gene 2 protein glioma tumor suppressor candidate region gene 2
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001079946.1	NP_001073415.1	glioma tumor suppressor candidate region gene 2 protein

Pathways from BioSystems

Homologies

	GLTSCR2	XP_001113326.1
Drosophila melanogaster (fruit fly)	CG1785	NP_572502.1
Saccharomyces cerevisiae (baker's yeast)	NOP53	NP_015179.1
Neurospora crassa	NCU05233	XP_961893.1
Xenopus tropicalis (tropical clawed frog)	gltscr2	XP_002939289.2
Homo sapiens (human)	GLTSCR2	NP_056525.2
Canis lupus familiaris (dog)	GLTSCR2	XP_005616435.1
Rattus norvegicus (Norway rat)	Gltscr2	NP_997474.1
Eremothecium gossypii	AGOS_ACR126W	NP_983528.1
Schizosaccharomyces pombe (fission yeast)	rrp16	NP_594732.1
Mus musculus (house mouse)	Gltscr2	NP_598592.2
Danio rerio (zebrafish)	gltscr2	NP_001073415.1
Magnaporthe oryzae (rice blast fungus)	MGG_04142	XP_003719688.1
Pan troglodytes (chimpanzee)	GLTSCR2	XP_001169866.2
Bos taurus (cattle)	GLTSCR2	NP_001033596.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000270	XP_310849.4
Caenorhabditis elegans (roundworm)	CELE_Y39B6A.33	NP_741664.1
Kluyveromyces lactis	KLLA0F11506g	XP_455604.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

A genome-wide survey demonstrates widespread non-linear mRNA in expressed sequences from multiple species.
Dixon RJ, Eperon IC, Hall L, Samani NJ
Nucleic acids research33(18)5904-13(2005)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following nop53 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the nop53 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa36848	NM_001079946.1 Latest version!	Danio rerio NOP53 ribosome biogenesis factor (nop53), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

nop53 ( NM_001079946.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001073415.1 Danio rerio NOP53 ribosome biogenesis factor (nop53), mRNA.

Price & Availability↑

CloneID	ODa36848
Clone ID Related Accession (Same CDS sequence)	NM_001079946.1
Accession Version	NM_001079946.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1374bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-06-26
Organism	Danio rerio(zebrafish)
Product	glioma tumor suppressor candidate region gene 2 protein
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC109456.1. On Mar 11, 2007 this sequence version replaced XM_001332473.1. ##Evidence-Data-START## Transcript exon combination :: BC109456.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGGCCG CCAGGAAGCA CAAACGCATG GCAGCGTCTC AACCAGGGTT TTTACCTCTT 
AAATCCGATT TGGATGGTAG TATTTCGAAT GCCAAACGGC GAAAGAGAGT GAACAAAAAC 
AAGAAAAAGA ACTGGAACAA ATACAGCGAT ATCCGAGATG TGGAAGACTT TCTGGACGAC 
GTGCGGCTTC AGGAGAAAGC TACAGGGGGG TTGATATCTG AAAAACCAGA TGACAGTCTC 
TTCTTCGTCG ACACTGGGGA AAAAGAGAAA GATAAACAAC CACAGACGAC AGCCAAGAAA 
GGTAAACGAT CTAAACCTTT GCGGATAGAT CTAATTCTTC AACCGGATTC CCACATACCT 
CCTCCCAAAA ATGTACTTGC ATACCAACAG CCCAACGCTA AAAAGCAGCG GCGCATGGCA 
GAAAAAGCAG CTAAGCTGGC AGCTATGGGT GTGTTGCCGC GAAGAGAAAA GCTTCTTCAA 
CTCCGAAGGG CAGCAGCTGC CTCTGGGGTG TCAGTTAAAG AAAAACCTGT GGCCAATAAT 
AATCCAGAAA GGCCATTTTA TGACCTGTGG AGTGAAGGCA CACCTGAGAC AGCAGATCCA 
TTCTACCTTG AACAGACTAA GAAAAAGCTT ATCAAGAGAC CAGATAGACT AAATGAGAAA 
CCTTCAGTGC TTCCTGCTAT TGAAGTCATT GCTGCTGGAG GCTCATACAA CCCAGACTTC 
TTTTCTCACC AGGAACTGCT TCGTGAAGCA CATGAGGTGG AGGTCAAAAA GCTGAAAGTG 
GAAGAAAAGT TGGCACGACA GCTTGCTGTG AATCAGGACA TTGCCACTGA GGAGAGCACC 
TTTAAAGAGC AGGTAGAGGG GTTAATTGAA GAAGATGAAG ATCAACCAGA AGATGCAGAT 
GGGGATGCTG ACGACACTGT CATTGGGCCA ACTGCAACAC AGGAAAAGAA AACGGAGAGG 
CAAAGGAAAA AAGAGAAGGC TGAAAAGATC AAGGAGTTGC AGAGGAAGGC AGAGCGTGAG 
GTGATCGATA AGAAACAGCA GTTGTTCCAA TTGCGCTCTA TTCGTGCAAA CCTGAAGAAT 
CAGGAACAGA GGACCAAGAT GAGGCAGGCT CAGCGCAAGG CAAAACAAGA GGCAGAGAAA 
AGCATGCCTC GTCGACTGGG CAGACTCAAG TACCAGGAAC CCGATCTCGA TATTCAGCTC 
AGTGATGAGC TTGCCAGTTC ACTTCGCAGT CTAAAGCCAG AGGGCAGCAT CCTAAAAGAC 
AGATTCAAGA GCTTACAGAA GAGAAACCTC ATTGAACCCA GAGAAAGAGC CAAGTTTAAG 
AGGAGGTATA AGCTGAAGTA CTCGGAAAAG AGAGCCTTCA GGGAGATACA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001073415.1
CDS	35..1408
Translation	MAAARKHKRMAASQPGFLPLKSDLDGSISNAKRRKRVNKNKKKNWNKYSDIRDVEDFLDDVRLQEKATGGLISEKPDDSLFFVDTGEKEKDKQPQTTAKKGKRSKPLRIDLILQPDSHIPPPKNVLAYQQPNAKKQRRMAEKAAKLAAMGVLPRREKLLQLRRAAAASGVSVKEKPVANNNPERPFYDLWSEGTPETADPFYLEQTKKKLIKRPDRLNEKPSVLPAIEVIAAGGSYNPDFFSHQELLREAHEVEVKKLKVEEKLARQLAVNQDIATEESTFKEQVEGLIEEDEDQPEDADGDADDTVIGPTATQEKKTERQRKKEKAEKIKELQRKAEREVIDKKQQLFQLRSIRANLKNQEQRTKMRQAQRKAKQEAEKSMPRRLGRLKYQEPDLDIQLSDELASSLRSLKPEGSILKDRFKSLQKRNLIEPRERAKFKRRYKLKYSEKRAFREIQ

Target ORF information:

RefSeq Version	NM_001079946.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio NOP53 ribosome biogenesis factor (nop53), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001079946.1

ORF Insert Sequence:

ATGGCGGCCG CCAGGAAGCA CAAACGCATG GCAGCGTCTC AACCAGGGTT TTTACCTCTT 
AAATCCGATT TGGATGGTAG TATTTCGAAT GCCAAACGGC GAAAGAGAGT GAACAAAAAC 
AAGAAAAAGA ACTGGAACAA ATACAGCGAT ATCCGAGATG TGGAAGACTT TCTGGACGAC 
GTGCGGCTTC AGGAGAAAGC TACAGGGGGG TTGATATCTG AAAAACCAGA TGACAGTCTC 
TTCTTCGTCG ACACTGGGGA AAAAGAGAAA GATAAACAAC CACAGACGAC AGCCAAGAAA 
GGTAAACGAT CTAAACCTTT GCGGATAGAT CTAATTCTTC AACCGGATTC CCACATACCT 
CCTCCCAAAA ATGTACTTGC ATACCAACAG CCCAACGCTA AAAAGCAGCG GCGCATGGCA 
GAAAAAGCAG CTAAGCTGGC AGCTATGGGT GTGTTGCCGC GAAGAGAAAA GCTTCTTCAA 
CTCCGAAGGG CAGCAGCTGC CTCTGGGGTG TCAGTTAAAG AAAAACCTGT GGCCAATAAT 
AATCCAGAAA GGCCATTTTA TGACCTGTGG AGTGAAGGCA CACCTGAGAC AGCAGATCCA 
TTCTACCTTG AACAGACTAA GAAAAAGCTT ATCAAGAGAC CAGATAGACT AAATGAGAAA 
CCTTCAGTGC TTCCTGCTAT TGAAGTCATT GCTGCTGGAG GCTCATACAA CCCAGACTTC 
TTTTCTCACC AGGAACTGCT TCGTGAAGCA CATGAGGTGG AGGTCAAAAA GCTGAAAGTG 
GAAGAAAAGT TGGCACGACA GCTTGCTGTG AATCAGGACA TTGCCACTGA GGAGAGCACC 
TTTAAAGAGC AGGTAGAGGG GTTAATTGAA GAAGATGAAG ATCAACCAGA AGATGCAGAT 
GGGGATGCTG ACGACACTGT CATTGGGCCA ACTGCAACAC AGGAAAAGAA AACGGAGAGG 
CAAAGGAAAA AAGAGAAGGC TGAAAAGATC AAGGAGTTGC AGAGGAAGGC AGAGCGTGAG 
GTGATCGATA AGAAACAGCA GTTGTTCCAA TTGCGCTCTA TTCGTGCAAA CCTGAAGAAT 
CAGGAACAGA GGACCAAGAT GAGGCAGGCT CAGCGCAAGG CAAAACAAGA GGCAGAGAAA 
AGCATGCCTC GTCGACTGGG CAGACTCAAG TACCAGGAAC CCGATCTCGA TATTCAGCTC 
AGTGATGAGC TTGCCAGTTC ACTTCGCAGT CTAAAGCCAG AGGGCAGCAT CCTAAAAGAC 
AGATTCAAGA GCTTACAGAA GAGAAACCTC ATTGAACCCA GAGAAAGAGC CAAGTTTAAG 
AGGAGGTATA AGCTGAAGTA CTCGGAAAAG AGAGCCTTCA GGGAGATACA GTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

A genome-wide survey demonstrates widespread non-linear mRNA in expressed sequences from multiple species.
Nucleic acids research33(18)5904-13(2005)
Dixon RJ,Eperon IC,Hall L,Samani NJ