Gene Symbol | SPT16 |
Entrez Gene ID | 826665 |
Full Name | global transcription factor C |
Synonyms | T12H20.3,T12H20_3,global transcription factor C |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » SPT16 cDNA ORF clone
Gene Symbol | SPT16 |
Entrez Gene ID | 826665 |
Full Name | global transcription factor C |
Synonyms | T12H20.3,T12H20_3,global transcription factor C |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_117139.3 | NP_192809.1 | global transcription factor C |
NM_001340681.1 | NP_001329034.1 | global transcription factor C |
NM_001340682.1 | NP_001329035.1 | global transcription factor C |
Mus musculus (house mouse) | Supt16 | NP_291096.2 |
Kluyveromyces lactis | KLLA0F09889g | XP_455530.1 |
Eremothecium gossypii | AGOS_AER360C | NP_985216.2 |
Schizosaccharomyces pombe (fission yeast) | spt16 | NP_596526.1 |
Oryza sativa (rice) | Os04g0321600 | NP_001052463.1 |
Pan troglodytes (chimpanzee) | SUPT16H | XP_528703.2 |
Rattus norvegicus (Norway rat) | Supt16h | NP_001100731.1 |
Danio rerio (zebrafish) | supt16h | NP_001091053.1 |
Bos taurus (cattle) | SUPT16H | NP_001179321.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP006817 | XP_308929.4 |
Neurospora crassa | NCU01164 | XP_961530.2 |
Arabidopsis thaliana (thale cress) | SPT16 | NP_192809.1 |
Homo sapiens (human) | SUPT16H | NP_009123.1 |
Canis lupus familiaris (dog) | SUPT16H | XP_851566.1 |
Saccharomyces cerevisiae (baker's yeast) | SPT16 | NP_011308.1 |
Drosophila melanogaster (fruit fly) | dre4 | NP_728686.2 |
Caenorhabditis elegans (roundworm) | F55A3.3 | NP_492821.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_07316 | XP_003715548.1 |
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
SPT16 and SSRP1 are critically involved in the regulation of leaf growth, flowering time and seed production, and interact with HUB1/2.
Title: The transcript elongation factor FACT affects Arabidopsis vegetative and reproductive development and genetically interacts with HUB1/2.
The following SPT16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SPT16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb39118 | |
Clone ID Related Accession (Same CDS sequence) | NM_001340682.1 | |
Accession Version | NM_001340682.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2304bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | global transcription factor C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGCTACCCT CCGATATTTC AAAGCGGAGG ACCTACCTAA TAGATGCAAC TTCTCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001329035.1 |
CDS | 978..3281 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340682.1 |
1 | ATGCTACCCT CCGATATTTC AAAGCGGAGG ACCTACCTAA TAGATGCAAC TTCTCTCCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb14566 | |
Clone ID Related Accession (Same CDS sequence) | NM_117139.3 , NM_001340681.1 | |
Accession Version | NM_117139.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3225bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | global transcription factor C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_117139.2. |
1 | ATGGCAGACT CTCGGAATGG TAATGCCCGA GCCCCTCCTA GTGGAGTGCC TCCAAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_192809.1 |
CDS | 181..3405 |
Translation |
Target ORF information:
Target ORF information:
|
NM_117139.3 |
1 | ATGGCAGACT CTCGGAATGG TAATGCCCGA GCCCCTCCTA GTGGAGTGCC TCCAAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb14566 | |
Clone ID Related Accession (Same CDS sequence) | NM_117139.3 , NM_001340681.1 | |
Accession Version | NM_001340681.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3225bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | global transcription factor C | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). |
1 | ATGGCAGACT CTCGGAATGG TAATGCCCGA GCCCCTCCTA GTGGAGTGCC TCCAAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001329034.1 |
CDS | 699..3923 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001340681.1 |
1 | ATGGCAGACT CTCGGAATGG TAATGCCCGA GCCCCTCCTA GTGGAGTGCC TCCAAAAGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. |