Gene Symbol | COL27A1 |
Entrez Gene ID | 464681 |
Full Name | collagen type XXVII alpha 1 chain |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
ORF » Species Summary » Pan troglodytes » COL27A1 cDNA ORF clone
Gene Symbol | COL27A1 |
Entrez Gene ID | 464681 |
Full Name | collagen type XXVII alpha 1 chain |
Gene Type | protein-coding |
Organism | Pan troglodytes(chimpanzee) |
mRNA | Protein | Name |
---|---|---|
XM_016961506.1 | XP_016816995.1 | collagen alpha-1(XXVII) chain isoform X2 |
XM_016961505.2 | XP_016816994.2 | collagen alpha-1(XXVII) chain isoform X1 |
XM_016961507.2 | XP_016816996.2 | collagen alpha-1(XXVII) chain isoform X3 |
XM_016961507.1 | XP_016816996.1 | collagen alpha-1(XXVII) chain isoform X3 |
XM_016961508.1 | XP_016816997.1 | collagen alpha-1(XXVII) chain isoform X4 |
XM_016961509.1 | XP_016816998.1 | collagen alpha-1(XXVII) chain isoform X5 |
XM_016961508.2 | XP_016816997.2 | collagen alpha-1(XXVII) chain isoform X4 |
XM_016961509.2 | XP_016816998.2 | collagen alpha-1(XXVII) chain isoform X5 |
XM_016961506.2 | XP_016816995.2 | collagen alpha-1(XXVII) chain isoform X2 |
XM_016961505.1 | XP_016816994.1 | collagen alpha-1(XXVII) chain isoform X1 |
Bos taurus (cattle) | COL27A1 | NP_001193609.1 |
Rattus norvegicus (Norway rat) | Col27a1 | NP_942042.1 |
Homo sapiens (human) | COL27A1 | NP_116277.2 |
Canis lupus familiaris (dog) | COL27A1 | XP_005627059.1 |
Pan troglodytes (chimpanzee) | COL27A1 | XP_520208.3 |
Gallus gallus (chicken) | COL27A1 | XP_415514.3 |
Mus musculus (house mouse) | Col27a1 | NP_079961.3 |
Xenopus tropicalis (tropical clawed frog) | LOC100490770 | XP_004916755.1 |
The following COL27A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL27A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OPc109597 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961505.2 | |
Accession Version | XM_016961505.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5583bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016961505.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816994.2 |
CDS | 1..5583 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961505.2 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc109598 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961506.2 | |
Accession Version | XM_016961506.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5577bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016961506.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGTTAG GCGCCGGAGG AAGGACCGAC CGGCCAGCCT CGCACGTAGG GACCCAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816995.2 |
CDS | 171..5747 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961506.2 |
1 | ATGCCGTTAG GCGCCGGAGG AAGGACCGAC CGGCCAGCCT CGCACGTAGG GACCCAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc109599 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961507.2 | |
Accession Version | XM_016961507.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016961507.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816996.2 |
CDS | 497..6025 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961507.2 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc109600 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961508.2 | |
Accession Version | XM_016961508.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016961508.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816997.2 |
CDS | 497..6025 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961508.2 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc109601 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961509.2 | |
Accession Version | XM_016961509.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5517bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-03-19 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_036888.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Mar 20, 2018 this sequence version replaced XM_016961509.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pan troglodytes Annotation Release 105 Annotation Version :: 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816998.2 |
CDS | 497..6013 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961509.2 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc89396 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961505.1 | |
Accession Version | XM_016961505.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5583bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006476.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816994.1 |
CDS | 500..6082 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961505.1 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc89397 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961506.1 | |
Accession Version | XM_016961506.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5577bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006476.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCCGTTAG GCGCCGGAGG AAGGACCGAC CGGCCAGCCT CGCACGTAGG GACCCAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816995.1 |
CDS | 182..5758 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961506.1 |
1 | ATGCCGTTAG GCGCCGGAGG AAGGACCGAC CGGCCAGCCT CGCACGTAGG GACCCAGGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc89398 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961507.1 | |
Accession Version | XM_016961507.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006476.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816996.1 |
CDS | 500..6028 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961507.1 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc89399 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961508.1 | |
Accession Version | XM_016961508.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5529bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006476.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816997.1 |
CDS | 500..6028 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961508.1 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OPc89400 | |
Clone ID Related Accession (Same CDS sequence) | XM_016961509.1 | |
Accession Version | XM_016961509.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 5517bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-01 | |
Organism | Pan troglodytes(chimpanzee) | |
Product | collagen alpha-1(XXVII) chain isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006476.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Pan troglodytes Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_016816998.1 |
CDS | 501..6017 |
Translation |
Target ORF information:
Target ORF information:
|
XM_016961509.1 |
1 | ATGGGAGCGG GATCGGCGCG GGGGGCCCGA GGCACAGCGG CGGCGGCGGC GGCGCGCGGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.