Gene Symbol | prp16 |
Entrez Gene ID | 2540006 |
Full Name | ATP-dependent RNA helicase Prp16 (predicted) |
Gene Type | protein-coding |
Organism | Schizosaccharomyces pombe(fission yeast) |
ORF » Species Summary » Schizosaccharomyces pombe » prp16 cDNA ORF clone
Gene Symbol | prp16 |
Entrez Gene ID | 2540006 |
Full Name | ATP-dependent RNA helicase Prp16 (predicted) |
Gene Type | protein-coding |
Organism | Schizosaccharomyces pombe(fission yeast) |
mRNA | Protein | Name |
---|---|---|
NM_001021796.3 | NP_595890.2 | putative ATP-dependent RNA helicase Prp16 |
Pan troglodytes (chimpanzee) | DHX38 | XP_511101.3 |
Bos taurus (cattle) | DHX38 | NP_001069266.1 |
Mus musculus (house mouse) | Dhx38 | NP_848467.1 |
Danio rerio (zebrafish) | dhx38 | NP_957170.1 |
Saccharomyces cerevisiae (baker's yeast) | PRP16 | NP_013012.3 |
Kluyveromyces lactis | KLLA0A07733g | XP_451344.1 |
Eremothecium gossypii | AGOS_ADR224W | NP_984320.1 |
Oryza sativa (rice) | Os07g0508000 | NP_001059742.1 |
Xenopus tropicalis (tropical clawed frog) | dhx38 | XP_002937626.2 |
DHX38 | XP_001097681.2 | |
Canis lupus familiaris (dog) | DHX38 | XP_005620809.1 |
Gallus gallus (chicken) | DHX38 | NP_001025753.1 |
Caenorhabditis elegans (roundworm) | mog-1 | NP_499212.1 |
Schizosaccharomyces pombe (fission yeast) | prp16 | NP_595890.2 |
Rattus norvegicus (Norway rat) | Dhx38 | NP_001099655.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008528 | XP_316912.4 |
Homo sapiens (human) | DHX38 | NP_054722.2 |
Drosophila melanogaster (fruit fly) | l(1)G0007 | NP_572947.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_11351 | XP_003713740.1 |
Neurospora crassa | NCU02728 | XP_965113.1 |
Arabidopsis thaliana (thale cress) | EMB3011 | NP_196805.2 |
The genome sequence of Schizosaccharomyces pombe.
Wood V, Gwilliam R, Rajandream MA, Lyne M, Lyne R, Stewart A, Sgouros J, Peat N, Hayles J, Baker S, Basham D, Bowman S, Brooks K, Brown D, Brown S, Chillingworth T, Churcher C, Collins M, Connor R, Cronin A, Davis P, Feltwell T, Fraser A, Gentles S, Goble A, Hamlin N, Harris D, Hidalgo J, Hodgson G, Holroyd S, Hornsby T, Howarth S, Huckle EJ, Hunt S, Jagels K, James K, Jones L, Jones M, Leather S, McDonald S, McLean J, Mooney P, Moule S, Mungall K, Murphy L, Niblett D, Odell C, Oliver K, O'Neil S, Pearson D, Quail MA, Rabbinowitsch E, Rutherford K, Rutter S, Saunders D, Seeger K, Sharp S, Skelton J, Simmonds M, Squares R, Squares S, Stevens K, Taylor K, Taylor RG, Tivey A, Walsh S, Warren T, Whitehead S, Woodward J, Volckaert G, Aert R, Robben J, Grymonprez B, Weltjens I, Vanstreels E, Rieger M, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, D?sterh?ft A, Fritzc C, Holzer E, Moestl D, Hilbert H, Borzym K, Langer I, Beck A, Lehrach H, Reinhardt R, Pohl TM, Eger P, Zimmermann W, Wedler H, Wambutt R, Purnelle B, Goffeau A, Cadieu E, Dr?ano S, Gloux S, Lelaure V, Mottier S, Galibert F, Aves SJ, Xiang Z, Hunt C, Moore K, Hurst SM, Lucas M, Rochet M, Gaillardin C, Tallada VA, Garzon A, Thode G, Daga RR, Cruzado L, Jimenez J, S?nchez M, del Rey F, Benito J, Dom?nguez A, Revuelta JL, Moreno S, Armstrong J, Forsburg SL, Cerutti L, Lowe T, McCombie WR, Paulsen I, Potashkin J, Shpakovski GV, Ussery D, Barrell BG, Nurse P, Cerrutti L
Nature415(6874)871-80(2002 Feb)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
n, we demonstrate that the splicing factor spPrp16p is enriched at the centromere, and associates with Cid12p (a factor in the RNAi pathway) and the intron-containing dg ncRNA. Interestingly, removal of the dg intron, mutations of its splice sites, or replacement of the dg intron with an euchromatic intron significantly decreased H3K9 dimethylation
Title: The intron in centromeric noncoding RNA facilitates RNAi-mediated formation of heterochromatin.
The following prp16 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prp16 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSc100032 | |
Clone ID Related Accession (Same CDS sequence) | NM_001021796.3 | |
Accession Version | NM_001021796.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 3522bp) Protein sequence SNP |
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Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-04-02 | |
Organism | Schizosaccharomyces pombe(fission yeast) | |
Product | putative ATP-dependent RNA helicase Prp16 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_003423). On Dec 10, 2012 this sequence version replaced NM_001021796.2. |
1 | ATGCTTTCAC ATAATCAAAA TGATTTGCTA TTTACGAAGT TAATAGATAA ATTAACTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_595890.2 |
CDS | 152..3673 |
Translation |
Target ORF information:
Target ORF information:
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1 | ATGCTTTCAC ATAATCAAAA TGATTTGCTA TTTACGAAGT TAATAGATAA ATTAACTGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The genome sequence of Schizosaccharomyces pombe. |