| Gene Symbol | SLA-DOB |
| Entrez Gene ID | 100135049 |
| Full Name | MHC class II, DO beta |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
ORF » Species Summary » Sus scrofa » SLA-DOB cDNA ORF clone
| Gene Symbol | SLA-DOB |
| Entrez Gene ID | 100135049 |
| Full Name | MHC class II, DO beta |
| Gene Type | protein-coding |
| Organism | Sus scrofa(pig) |
| Genome |
| mRNA | Protein | Name |
|---|---|---|
| NM_001114064.2 | NP_001107536.2 | MHC class II, DO beta precursor |
| XM_005665840.2 | XP_005665897.1 | MHC class II, DO beta isoform X1 |
| XM_021097880.1 | XP_020953539.1 | MHC class II, DO beta isoform X2 |
| XM_021097879.1 | XP_020953538.1 | MHC class II, DO beta isoform X1 |
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H, Okumura N, Hamasima N, Awata T
Nucleic acids research32(Database issue)D484-8(2004 Jan)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following SLA-DOB gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SLA-DOB cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OSe29399 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001114064.2 | |
| Accession Version | NM_001114064.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 834bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2019-07-01 | |
| Organism | Sus scrofa(pig) | |
| Product | MHC class II, DO beta precursor | |
| Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ333334.1. On Feb 3, 2008 this sequence version replaced NM_001114064.1. ##Evidence-Data-START## Transcript exon combination :: DQ333334.1, FS698543.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3179989, SAMEA3179995 [ECO:0000348] ##Evidence-Data-END## | |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001107536.2 |
| CDS | 18..851 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001114064.2 |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe13504 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005665840.2 , XM_021097879.1 | |
| Accession Version | XM_005665840.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-09-10 | |
| Organism | Sus scrofa(Pig) | |
| Product | MHC class II, DO beta isoform X1 | |
| Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003610618.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 11, 2015 this sequence version replaced XM_005665840.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005665897.1 |
| CDS | 149..979 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005665840.2 |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe13504 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005665840.2 , XM_021097879.1 | |
| Accession Version | XM_021097879.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 831bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | MHC class II, DO beta isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020953538.1 |
| CDS | 304..1134 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021097879.1 |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OSe222268 | |
| Clone ID Related Accession (Same CDS sequence) | XM_021097880.1 | |
| Accession Version | XM_021097880.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 756bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2017-05-12 | |
| Organism | Sus scrofa(pig) | |
| Product | MHC class II, DO beta isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_010449.5) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Sus scrofa Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_020953539.1 |
| CDS | 305..1060 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_021097880.1 |
1 | ATGATTTATA CAACCTCATT TTCTTTTTCC CCCTCCAGAA TGGGTTCTAG CTGGGTTCCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. |