Gene Symbol | DBP5 |
Entrez Gene ID | 854211 |
Full Name | ATP-dependent RNA helicase DBP5 |
Synonyms | RAT8 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
ORF » Species Summary » Saccharomyces cerevisiae S288C » DBP5 cDNA ORF clone
Gene Symbol | DBP5 |
Entrez Gene ID | 854211 |
Full Name | ATP-dependent RNA helicase DBP5 |
Synonyms | RAT8 |
Gene Type | protein-coding |
Organism | Saccharomyces cerevisiae S288C |
mRNA | Protein | Name |
---|---|---|
NM_001183465.1 | NP_014689.1 | ATP-dependent RNA helicase DBP5 |
Kluyveromyces lactis | KLLA0F15950g | XP_455798.1 |
Pan troglodytes (chimpanzee) | DDX19A | XP_003339332.1 |
Caenorhabditis elegans (roundworm) | ddx-19 | NP_001254186.1 |
Eremothecium gossypii | AGOS_ACR078W | NP_983480.2 |
Neurospora crassa | NCU01160 | XP_961526.1 |
Arabidopsis thaliana (thale cress) | LOS4 | NP_190879.1 |
Bos taurus (cattle) | DDX19A | NP_001029743.1 |
Mus musculus (house mouse) | Ddx19a | NP_031942.2 |
Danio rerio (zebrafish) | zgc:193690 | NP_001122187.1 |
Saccharomyces cerevisiae (baker's yeast) | DBP5 | NP_014689.1 |
Homo sapiens (human) | DDX19A | NP_060802.1 |
Canis lupus familiaris (dog) | DDX19A | XP_536790.2 |
Schizosaccharomyces pombe (fission yeast) | SPBC12C2.06 | NP_596016.1 |
Rattus norvegicus (Norway rat) | Ddx19a | NP_001005381.2 |
Magnaporthe oryzae (rice blast fungus) | MGG_07333 | XP_003715569.1 |
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.
Dujon B, Albermann K, Aldea M, Alexandraki D, Ansorge W, Arino J, Benes V, Bohn C, Bolotin-Fukuhara M, Bordonn? R, Boyer J, Camasses A, Casamayor A, Casas C, Ch?ret G, Cziepluch C, Daignan-Fornier B, Dang DV, de Haan M, Delius H, Durand P, Fairhead C, Feldmann H, Gaillon L, Kleine K
Nature387(6632 Suppl)98-102(1997 May)
Life with 6000 genes.
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Johnston M, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG
Science (New York, N.Y.)274(5287)546, 563-7(1996 Oct)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
These data show that ATP binds Dbp5 weakly in rapid equilibrium with a binding affinity (KT~4 mM) comparable to the KM for steady-state cycling, while ADP binds an order of magnitude more tightly (KD~0.4 mM).
Title: P(I) Release Limits the Intrinsic and RNA-Stimulated ATPase Cycles of DEAD-Box Protein 5 (Dbp5).
Dbp5 supports ribosomal transport by capturing ribosomal subunits upon their cytoplasmic appearance at the nuclear pore complex, possibly by binding export factors such as Mex67.
Title: Nuclear Export of Pre-Ribosomal Subunits Requires Dbp5, but Not as an RNA-Helicase as for mRNA Export.
Gle1 specifically binds IP(6); this interaction is required for the full potentiation of Dbp5 ATPase activity during both mRNA export and translation termination
Title: Control of mRNA export and translation termination by inositol hexakisphosphate requires specific interaction with Gle1.
Study identified several charged surface residues that, when mutated, weaken the binding of Gle1 and inhibit the ability of Gle1 to stimulate Dbp5's ATPase activity.
Title: Structure of the C-terminus of the mRNA export factor Dbp5 reveals the interaction surface for the ATPase activator Gle1.
Wild-type Rat8p localizes to NPCs and diffusely throughout the cell but rat8-2p localized to cytoplasmic granules at nonpermissive temperature that are distinct from P-bodies
Title: Synthetic genetic array analysis in Saccharomyces cerevisiae provides evidence for an interaction between RAT8/DBP5 and genes encoding P-body components.
The following DBP5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the DBP5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OSi03357 | |
Clone ID Related Accession (Same CDS sequence) | NM_001183465.1 | |
Accession Version | NM_001183465.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1449bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-31 | |
Organism | Saccharomyces cerevisiae S288C | |
Product | ATP-dependent RNA helicase DBP5 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by SGD. This record is derived from an annotated genomic sequence (NC_001147). ##Genome-Annotation-Data-START## Annotation Provider :: SGD Annotation Status :: Full Annotation Annotation Version :: R64-2-1 URL :: http://www.yeastgenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. |
1 | ATGAGTGATA CAAAGAGAGA TCCGGCCGAT TTACTAGCTT CTTTAAAGAT TGATAATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_014689.1 |
CDS | 1..1449 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001183465.1 |
1 | ATGAGTGATA CAAAGAGAGA TCCGGCCGAT TTACTAGCTT CTTTAAAGAT TGATAATGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV. |
Life with 6000 genes. |