Ptcd3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Ptcd3
Entrez Gene ID	500199
Full Name	Pentatricopeptide repeat domain 3
General protein information	Preferred Names Pentatricopeptide repeat domain 3 Names pentatricopeptide repeat domain-containing protein 3, mitochondrial pentatricopeptide repeat-containing protein 3, mitochondrial
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 4 Map Location: 4q31

mRNA and Protein(s)

mRNA	Protein	Name
XM_017592810.1	XP_017448299.1	pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X2
NM_001134718.1	NP_001128190.1	pentatricopeptide repeat domain-containing protein 3, mitochondrial
XM_017592809.1	XP_017448298.1	pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG4679	NP_610854.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP009772	XP_318858.4
Canis lupus familiaris (dog)	PTCD3	XP_532975.3
Bos taurus (cattle)	PTCD3	NP_001039499.1
Xenopus tropicalis (tropical clawed frog)	ptcd3	NP_001072165.2
Danio rerio (zebrafish)	ptcd3	NP_001032449.1
Homo sapiens (human)	PTCD3	NP_060422.4
Pan troglodytes (chimpanzee)	PTCD3	XP_515596.2
	PTCD3	XP_001091372.1
Mus musculus (house mouse)	Ptcd3	NP_081551.2
Rattus norvegicus (Norway rat)	Ptcd3	NP_001128190.1
Gallus gallus (chicken)	PTCD3	XP_420852.3

Gene Ontology
Bibliography

Related articles in PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW
Cell149(6)1393-406(2012 Jun)

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Baltz AG, Munschauer M, Schwanh?usser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M
Molecular cell46(5)674-90(2012 Jun)

Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation.
Davies SM, Rackham O, Shearwood AM, Hamilton KL, Narsai R, Whelan J, Filipovska A
FEBS letters583(12)1853-8(2009 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Ptcd3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Ptcd3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)
ORa03481	NM_001134718.1 Latest version!	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
ORa27343	XM_017592809.1 Latest version!	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$391.30 $559.00
ORa60973	XM_017592810.1 Latest version!	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X3, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$307.30 $439.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Ptcd3 ( NM_001134718.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001128190.1 Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), mRNA.

Price & Availability↑

CloneID	ORa03481
Clone ID Related Accession (Same CDS sequence)	NM_001134718.1
Accession Version	NM_001134718.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2064bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-10-02
Organism	Rattus norvegicus(Norway rat)
Product	pentatricopeptide repeat domain-containing protein 3, mitochondrial
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AABR07060906.1. On Sep 4, 2008 this sequence version replaced XM_001065864.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00052296, SAMD00052297 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END##

ATGGCGGCGG CAGCGGCTGC TCGCTGTTTG CCCTTTCGCA GCGGTCTTGT CTTGCTGCGG 
ACCACTCGGG AAACGGGTGT GTATGAACCG AAGCTCTGTT GCAGATTTTA TCCTGGAAGT 
GAATCCCTCC CAAAGGTTGA AGGAACAGAT ATAACAGGGA TTGAAGAAAT AGTCATTCCA 
AAAAAGAAAA CATGGGATAA AGTGGCCGTT CTTCAAGCAC TTGCATCCAC AGTAACCAGG 
GATCCTACAG CTGCACCTTA CGTGTTTCAG GATGACCCTT ACCTCATACC AACCTCTGCG 
ATGGAGTCTC GTTCGTTTTT ATTGGCAAAG AAATCTGGAG AGACTGCAGC AAAGTTTATT 
ATTAATTCAC ATCCCAAATA TTTCCAAAAG GATATAGCTG AGCCTCATAT ACCGTGCTTA 
ATGCCCGAGT ACTTGGAGCC TCAGATTGAA GGTGTGAGTG AAGCTGCCCT GAAGGAACGA 
GTCAAACTCA AAAGAGTCAA AGCTTCAGTG GACATTTTTG ACCAGCTCTT GCAAGCAGGA 
ACCACAGTCT CTCTTGAAAC AACTAATAGT CTTTTGGATT TATTGTGTTA CTATGGTGAT 
CAAGAGCCCC CAGCTGACTA TCCTTTTCAA CAAACCGAAC ATTTGGAAAA CTTGGAAGAG 
GCTGCTGAGG AAAACAACCA AACACCCAGG ATGGAGTCTG GTCTTTGGAA AGCACAAAAC 
AATGCCGAGA GAATCTTTGC TCTGATGCCA GAGAAAAATG CACGCTCCTA CTGCACGATG 
ATCCGAGGGA TGGTGAAGCA CCGAGCTTAT GCACAGGCGT TGAACTTGTA CACTGAGTTA 
TTAAATAACA GACTTAGTGC TGATGTATAC ACCTTTAATG CATTGATTGA AGCAAAAACA 
TTCATTCCCA ATGAGAAATT TGAGGAAAAA TGGAATGATA TATTGGATCT ACTAAGACAT 
ATGGTTGCAC AGAAGGTAAA GCCAAACCTG CAGACGTTTA ACACAACGCT GAAATGTCTC 
CGCAAGTTTC ATTCACTTGG AAGGCTACCA GCCTTACAGA TACTACGTGA AATGAAACAT 
ATTGGAATAG AACCCTCACT TGCAACTTAC CATCATATCA TTCACCTCTT TTACCCACGA 
GATAGTAGCT CTATAAAAAT ACCATCCCTT ATCATCTATG ATATCATGAA TGAATTAGAG 
GGAAGAACAT TTTCTCCACA GGACCTGGAT GATGATAAAT TTTTCCAGTC GGCCATGACT 
GTGTGTTCAT CTCTCAGAGA TTTAGAGCTT GCTTACCAAT TACATGGTCT TTTAAACACG 
GGAGACAACC GGAAACTGAT TGGACCTGAT TCTCAGCGTA AAGCGTATTA TTCGAAGTTT 
TTCAGTTTGA TTTGTTCACT GGAACAAATT GATGTCACCC TGAAGTGGTA TAAGGACCTG 
ATACCTTCAG TATTTCTTCC CCACTCCCAA ATATTCATAG GTCTTCTTCA AGCAGTGGAT 
GTGGCCAATA GGTTAGAAAT GGTTCCTCAG ATTTGGAAAG ACAGTAAAGA ATATGGCCAT 
ACTTTTCGAG GTGCCCTAAG AGAAGAAGTG TTGATGCTCA TGGCCAGGGA TAAACATTCA 
CCAGAGCTTC AGGTTGCATT TGCTGACTGT GCTGCTGATA TCAAATCCAC ATATGAAAAC 
CAGGATGCCC GGCAGACAGC TCTTGATTGG CCAGCCAACC CTTTACATTA TATAGCCTTC 
CTTTTTTTAA GAGGGGGCAG AACCCAGGAA GCCTGGAAAA TGTTGACACT TTTCAGAAAG 
CATAATAAGA TTCCCAGAAA TGAGTTGCTG GAGGAATTTA TGGACACAGC AAAAGCATCC 
AGTAGCACTA CTCTGGCCAT TGAGGTTGTC AGGCTGGCAA GTGCCTTTAG CTTGCCTATT 
AGTGAGAGCC TTGCCCAAAG AGTAATGATG GATTTCACAG TTGACCCAGA GCAAAAAGAA 
GCCCTGAGTA ACCTCACTGC ACTGAACAGT AGTGATGGAG AAAGCAGCAG TGACAGTGAC 
AGTGACATCA GTGAAAACAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001128190.1
CDS	51..2114
Translation	MAAAAAARCLPFRSGLVLLRTTRETGVYEPKLCCRFYPGSESLPKVEGTDITGIEEIVIPKKKTWDKVAVLQALASTVTRDPTAAPYVFQDDPYLIPTSAMESRSFLLAKKSGETAAKFIINSHPKYFQKDIAEPHIPCLMPEYLEPQIEGVSEAALKERVKLKRVKASVDIFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPPADYPFQQTEHLENLEEAAEENNQTPRMESGLWKAQNNAERIFALMPEKNARSYCTMIRGMVKHRAYAQALNLYTELLNNRLSADVYTFNALIEAKTFIPNEKFEEKWNDILDLLRHMVAQKVKPNLQTFNTTLKCLRKFHSLGRLPALQILREMKHIGIEPSLATYHHIIHLFYPRDSSSIKIPSLIIYDIMNELEGRTFSPQDLDDDKFFQSAMTVCSSLRDLELAYQLHGLLNTGDNRKLIGPDSQRKAYYSKFFSLICSLEQIDVTLKWYKDLIPSVFLPHSQIFIGLLQAVDVANRLEMVPQIWKDSKEYGHTFRGALREEVLMLMARDKHSPELQVAFADCAADIKSTYENQDARQTALDWPANPLHYIAFLFLRGGRTQEAWKMLTLFRKHNKIPRNELLEEFMDTAKASSSTTLAIEVVRLASAFSLPISESLAQRVMMDFTVDPEQKEALSNLTALNSSDGESSSDSDSDISENK

Target ORF information:

RefSeq Version	NM_001134718.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001134718.1

ORF Insert Sequence:

ATGGCGGCGG CAGCGGCTGC TCGCTGTTTG CCCTTTCGCA GCGGTCTTGT CTTGCTGCGG 
ACCACTCGGG AAACGGGTGT GTATGAACCG AAGCTCTGTT GCAGATTTTA TCCTGGAAGT 
GAATCCCTCC CAAAGGTTGA AGGAACAGAT ATAACAGGGA TTGAAGAAAT AGTCATTCCA 
AAAAAGAAAA CATGGGATAA AGTGGCCGTT CTTCAAGCAC TTGCATCCAC AGTAACCAGG 
GATCCTACAG CTGCACCTTA CGTGTTTCAG GATGACCCTT ACCTCATACC AACCTCTGCG 
ATGGAGTCTC GTTCGTTTTT ATTGGCAAAG AAATCTGGAG AGACTGCAGC AAAGTTTATT 
ATTAATTCAC ATCCCAAATA TTTCCAAAAG GATATAGCTG AGCCTCATAT ACCGTGCTTA 
ATGCCCGAGT ACTTGGAGCC TCAGATTGAA GGTGTGAGTG AAGCTGCCCT GAAGGAACGA 
GTCAAACTCA AAAGAGTCAA AGCTTCAGTG GACATTTTTG ACCAGCTCTT GCAAGCAGGA 
ACCACAGTCT CTCTTGAAAC AACTAATAGT CTTTTGGATT TATTGTGTTA CTATGGTGAT 
CAAGAGCCCC CAGCTGACTA TCCTTTTCAA CAAACCGAAC ATTTGGAAAA CTTGGAAGAG 
GCTGCTGAGG AAAACAACCA AACACCCAGG ATGGAGTCTG GTCTTTGGAA AGCACAAAAC 
AATGCCGAGA GAATCTTTGC TCTGATGCCA GAGAAAAATG CACGCTCCTA CTGCACGATG 
ATCCGAGGGA TGGTGAAGCA CCGAGCTTAT GCACAGGCGT TGAACTTGTA CACTGAGTTA 
TTAAATAACA GACTTAGTGC TGATGTATAC ACCTTTAATG CATTGATTGA AGCAAAAACA 
TTCATTCCCA ATGAGAAATT TGAGGAAAAA TGGAATGATA TATTGGATCT ACTAAGACAT 
ATGGTTGCAC AGAAGGTAAA GCCAAACCTG CAGACGTTTA ACACAACGCT GAAATGTCTC 
CGCAAGTTTC ATTCACTTGG AAGGCTACCA GCCTTACAGA TACTACGTGA AATGAAACAT 
ATTGGAATAG AACCCTCACT TGCAACTTAC CATCATATCA TTCACCTCTT TTACCCACGA 
GATAGTAGCT CTATAAAAAT ACCATCCCTT ATCATCTATG ATATCATGAA TGAATTAGAG 
GGAAGAACAT TTTCTCCACA GGACCTGGAT GATGATAAAT TTTTCCAGTC GGCCATGACT 
GTGTGTTCAT CTCTCAGAGA TTTAGAGCTT GCTTACCAAT TACATGGTCT TTTAAACACG 
GGAGACAACC GGAAACTGAT TGGACCTGAT TCTCAGCGTA AAGCGTATTA TTCGAAGTTT 
TTCAGTTTGA TTTGTTCACT GGAACAAATT GATGTCACCC TGAAGTGGTA TAAGGACCTG 
ATACCTTCAG TATTTCTTCC CCACTCCCAA ATATTCATAG GTCTTCTTCA AGCAGTGGAT 
GTGGCCAATA GGTTAGAAAT GGTTCCTCAG ATTTGGAAAG ACAGTAAAGA ATATGGCCAT 
ACTTTTCGAG GTGCCCTAAG AGAAGAAGTG TTGATGCTCA TGGCCAGGGA TAAACATTCA 
CCAGAGCTTC AGGTTGCATT TGCTGACTGT GCTGCTGATA TCAAATCCAC ATATGAAAAC 
CAGGATGCCC GGCAGACAGC TCTTGATTGG CCAGCCAACC CTTTACATTA TATAGCCTTC 
CTTTTTTTAA GAGGGGGCAG AACCCAGGAA GCCTGGAAAA TGTTGACACT TTTCAGAAAG 
CATAATAAGA TTCCCAGAAA TGAGTTGCTG GAGGAATTTA TGGACACAGC AAAAGCATCC 
AGTAGCACTA CTCTGGCCAT TGAGGTTGTC AGGCTGGCAA GTGCCTTTAG CTTGCCTATT 
AGTGAGAGCC TTGCCCAAAG AGTAATGATG GATTTCACAG TTGACCCAGA GCAAAAAGAA 
GCCCTGAGTA ACCTCACTGC ACTGAACAGT AGTGATGGAG AAAGCAGCAG TGACAGTGAC 
AGTGACATCA GTGAAAACAA ATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ptcd3 ( XM_017592809.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017448298.1 Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa27343
Clone ID Related Accession (Same CDS sequence)	XM_017592809.1
Accession Version	XM_017592809.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2136bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTCCACG CCAGCCCCGC CTCTCGACCC TGTAGGCGGA GGGCGTTCCC AACGTGCTCT 
GCGAGGAGTT CAAAGATGGC GGCGGCAGCG GCTGCTCGCT GTTTGCCCTT TCGCAGCGGT 
CTTGTCTTGC TGCGGACCAC TCGGGAAACG GGTGTGTATG AACCGAAGCT CTGTTGCAGA 
TTTTATCCTG GAAGTGAATC CCTCCCAAAG GTTGAAGGAA CAGATATAAC AGGGATTGAA 
GAAATAGTCA TTCCAAAAAA GAAAACATGG GATAAAGTGG CCGTTCTTCA AGCACTTGCA 
TCCACAGTAA CCAGGGATCC TACAGCTGCA CCTTACGTGT TTCAGGATGA CCCTTACCTC 
ATACCAACCT CTGCGATGGA GTCTCGTTCG TTTTTATTGG CAAAGAAATC TGGAGAGACT 
GCAGCAAAGT TTATTATTAA TTCACATCCC AAATATTTCC AAAAGGATAT AGCTGAGCCT 
CATATACCGT GCTTAATGCC CGAGTACTTG GAGCCTCAGA TTGAAGGTGT GAGTGAAGCT 
GCCCTGAAGG AACGAGTCAA ACTCAAAAGA GTCAAAGCTT CAGTGGACAT TTTTGACCAG 
CTCTTGCAAG CAGGAACCAC AGTCTCTCTT GAAACAACTA ATAGTCTTTT GGATTTATTG 
TGTTACTATG GTGATCAAGA GCCCCCAGCT GACTATCCTT TTCAACAAAC CGAACATTTG 
GAAAACTTGG AAGAGGCTGC TGAGGAAAAC AACCAAACAC CCAGGATGGA GTCTGGTCTT 
TGGAAAGCAC AAAACAATGC CGAGAGAATC TTTGCTCTGA TGCCAGAGAA AAATGCACGC 
TCCTACTGCA CGATGATCCG AGGGATGGTG AAGCACCGAG CTTATGCACA GGCGTTGAAC 
TTGTACACTG AGTTATTAAA TAACAGACTT AGTGCTGATG TATACACCTT TAATGCATTG 
ATTGAAGCAA AAACATTCAT TCCCAATGAG AAATTTGAGG AAAAATGGAA TGATATATTG 
GATCTACTAA GACATATGGT TGCACAGAAG GTAAAGCCAA ACCTGCAGAC GTTTAACACA 
ACGCTGAAAT GTCTCCGCAA GTTTCATTCA CTTGGAAGGC TACCAGCCTT ACAGATACTA 
CGTGAAATGA AACATATTGG AATAGAACCC TCACTTGCAA CTTACCATCA TATCATTCAC 
CTCTTTTACC CACGAGGTAG CTCTATAAAA ATACCATCCC TTATCATCTA TGATATCATG 
AATGAATTAG AGGGAAGAAC ATTTTCTCCA CAGGACCTGG ATGATGATAA ATTTTTCCAG 
TCGGCCATGA CTGTGTGTTC ATCTCTCAGA GATTTAGAGC TTGCTTACCA ATTACATGGT 
CTTTTAAACA CGGGAGACAA CCGGAAACTG ATTGGACCTG ATTCTCAGCG TAAAGCGTAT 
TATTCGAAGT TTTTCAGTTT GATTTGTTCA CTGGAACAAA TTGATGTCAC CCTGAAGTGG 
TATAAGGACC TGATACCTTC AGTATTTCTT CCCCACTCCC AAATATTCAT AGGTCTTCTT 
CAAGCAGTGG ATGTGGCCAA TAGGTTAGAA ATGGTTCCTC AGATTTGGAA AGACAGTAAA 
GAATATGGCC ATACTTTTCG AGGTGCCCTA AGAGAAGAAG TGTTGATGCT CATGGCCAGG 
GATAAACATT CACCAGAGCT TCAGGTTGCA TTTGCTGACT GTGCTGCTGA TATCAAATCC 
ACATATGAAA ACCAGGATGC CCGGCAGACA GCTCTTGATT GGCCAGCCAA CCCTTTACAT 
TATATAGCCT TCCTTTTTTT AAGAGGGGGC AGAACCCAGG AAGCCTGGAA AATGTTGACA 
CTTTTCAGAA AGCATAATAA GATTCCCAGA AATGAGTTGC TGGAGGAATT TATGGACACA 
GCAAAAGCAT CCAGTAGCAC TACTCTGGCC ATTGAGGTTG TCAGGCTGGC AAGTGCCTTT 
AGCTTGCCTA TTAGTGAGAG CCTTGCCCAA AGAGTAATGA TGGATTTCAC AGTTGACCCA 
GAGCAAAAAG AAGCCCTGAG TAACCTCACT GCACTGAACA GTAGTGATGG AGAAAGCAGC 
AGTGACAGTG ACAGTGACAT CAGTGAAAAC AAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017448298.1
CDS	7..2142
Translation	MFHASPASRPCRRRAFPTCSARSSKMAAAAAARCLPFRSGLVLLRTTRETGVYEPKLCCRFYPGSESLPKVEGTDITGIEEIVIPKKKTWDKVAVLQALASTVTRDPTAAPYVFQDDPYLIPTSAMESRSFLLAKKSGETAAKFIINSHPKYFQKDIAEPHIPCLMPEYLEPQIEGVSEAALKERVKLKRVKASVDIFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPPADYPFQQTEHLENLEEAAEENNQTPRMESGLWKAQNNAERIFALMPEKNARSYCTMIRGMVKHRAYAQALNLYTELLNNRLSADVYTFNALIEAKTFIPNEKFEEKWNDILDLLRHMVAQKVKPNLQTFNTTLKCLRKFHSLGRLPALQILREMKHIGIEPSLATYHHIIHLFYPRGSSIKIPSLIIYDIMNELEGRTFSPQDLDDDKFFQSAMTVCSSLRDLELAYQLHGLLNTGDNRKLIGPDSQRKAYYSKFFSLICSLEQIDVTLKWYKDLIPSVFLPHSQIFIGLLQAVDVANRLEMVPQIWKDSKEYGHTFRGALREEVLMLMARDKHSPELQVAFADCAADIKSTYENQDARQTALDWPANPLHYIAFLFLRGGRTQEAWKMLTLFRKHNKIPRNELLEEFMDTAKASSSTTLAIEVVRLASAFSLPISESLAQRVMMDFTVDPEQKEALSNLTALNSSDGESSSDSDSDISENK

Target ORF information:

RefSeq Version	XM_017592809.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017592809.1

ORF Insert Sequence:

ATGTTCCACG CCAGCCCCGC CTCTCGACCC TGTAGGCGGA GGGCGTTCCC AACGTGCTCT 
GCGAGGAGTT CAAAGATGGC GGCGGCAGCG GCTGCTCGCT GTTTGCCCTT TCGCAGCGGT 
CTTGTCTTGC TGCGGACCAC TCGGGAAACG GGTGTGTATG AACCGAAGCT CTGTTGCAGA 
TTTTATCCTG GAAGTGAATC CCTCCCAAAG GTTGAAGGAA CAGATATAAC AGGGATTGAA 
GAAATAGTCA TTCCAAAAAA GAAAACATGG GATAAAGTGG CCGTTCTTCA AGCACTTGCA 
TCCACAGTAA CCAGGGATCC TACAGCTGCA CCTTACGTGT TTCAGGATGA CCCTTACCTC 
ATACCAACCT CTGCGATGGA GTCTCGTTCG TTTTTATTGG CAAAGAAATC TGGAGAGACT 
GCAGCAAAGT TTATTATTAA TTCACATCCC AAATATTTCC AAAAGGATAT AGCTGAGCCT 
CATATACCGT GCTTAATGCC CGAGTACTTG GAGCCTCAGA TTGAAGGTGT GAGTGAAGCT 
GCCCTGAAGG AACGAGTCAA ACTCAAAAGA GTCAAAGCTT CAGTGGACAT TTTTGACCAG 
CTCTTGCAAG CAGGAACCAC AGTCTCTCTT GAAACAACTA ATAGTCTTTT GGATTTATTG 
TGTTACTATG GTGATCAAGA GCCCCCAGCT GACTATCCTT TTCAACAAAC CGAACATTTG 
GAAAACTTGG AAGAGGCTGC TGAGGAAAAC AACCAAACAC CCAGGATGGA GTCTGGTCTT 
TGGAAAGCAC AAAACAATGC CGAGAGAATC TTTGCTCTGA TGCCAGAGAA AAATGCACGC 
TCCTACTGCA CGATGATCCG AGGGATGGTG AAGCACCGAG CTTATGCACA GGCGTTGAAC 
TTGTACACTG AGTTATTAAA TAACAGACTT AGTGCTGATG TATACACCTT TAATGCATTG 
ATTGAAGCAA AAACATTCAT TCCCAATGAG AAATTTGAGG AAAAATGGAA TGATATATTG 
GATCTACTAA GACATATGGT TGCACAGAAG GTAAAGCCAA ACCTGCAGAC GTTTAACACA 
ACGCTGAAAT GTCTCCGCAA GTTTCATTCA CTTGGAAGGC TACCAGCCTT ACAGATACTA 
CGTGAAATGA AACATATTGG AATAGAACCC TCACTTGCAA CTTACCATCA TATCATTCAC 
CTCTTTTACC CACGAGGTAG CTCTATAAAA ATACCATCCC TTATCATCTA TGATATCATG 
AATGAATTAG AGGGAAGAAC ATTTTCTCCA CAGGACCTGG ATGATGATAA ATTTTTCCAG 
TCGGCCATGA CTGTGTGTTC ATCTCTCAGA GATTTAGAGC TTGCTTACCA ATTACATGGT 
CTTTTAAACA CGGGAGACAA CCGGAAACTG ATTGGACCTG ATTCTCAGCG TAAAGCGTAT 
TATTCGAAGT TTTTCAGTTT GATTTGTTCA CTGGAACAAA TTGATGTCAC CCTGAAGTGG 
TATAAGGACC TGATACCTTC AGTATTTCTT CCCCACTCCC AAATATTCAT AGGTCTTCTT 
CAAGCAGTGG ATGTGGCCAA TAGGTTAGAA ATGGTTCCTC AGATTTGGAA AGACAGTAAA 
GAATATGGCC ATACTTTTCG AGGTGCCCTA AGAGAAGAAG TGTTGATGCT CATGGCCAGG 
GATAAACATT CACCAGAGCT TCAGGTTGCA TTTGCTGACT GTGCTGCTGA TATCAAATCC 
ACATATGAAA ACCAGGATGC CCGGCAGACA GCTCTTGATT GGCCAGCCAA CCCTTTACAT 
TATATAGCCT TCCTTTTTTT AAGAGGGGGC AGAACCCAGG AAGCCTGGAA AATGTTGACA 
CTTTTCAGAA AGCATAATAA GATTCCCAGA AATGAGTTGC TGGAGGAATT TATGGACACA 
GCAAAAGCAT CCAGTAGCAC TACTCTGGCC ATTGAGGTTG TCAGGCTGGC AAGTGCCTTT 
AGCTTGCCTA TTAGTGAGAG CCTTGCCCAA AGAGTAATGA TGGATTTCAC AGTTGACCCA 
GAGCAAAAAG AAGCCCTGAG TAACCTCACT GCACTGAACA GTAGTGATGG AGAAAGCAGC 
AGTGACAGTG ACAGTGACAT CAGTGAAAAC AAATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Ptcd3 ( XM_017592810.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_017448299.1 Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X3, mRNA.

Price & Availability↑

CloneID	ORa60973
Clone ID Related Accession (Same CDS sequence)	XM_017592810.1
Accession Version	XM_017592810.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1959bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X2
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005103.4) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGTTCCACG CCAGCCCCGC CTCTCGACCC TGTAGGCGGA GGGCGTTCCC AACGTGCTCT 
GCGAGGAGTT CAAAGATGGC GGCGGCAGCG GCTGCTCGCT GTTTGCCCTT TCGCAGCGGT 
CTTGTCTTGC TGCGGACCAC TCGGGAAACG GGTGTGTATG AACCGAAGCT CTGTTGCAGA 
TTTTATCCTG GAAGTGAATC CCTCCCAAAG GTTGAAGGAA CAGATATAAC AGGGATTGAA 
GAAATAGTCA TTCCAAAAAA GAAAACATGG GATAAAGTGG CCGTTCTTCA AGCACTTGCA 
TCCACAGTAA CCAGGGATCC TACAGCTGCA CCTTACGTGT TTCAGGATGA CCCTTACCTC 
ATACCAACCT CTGCGATGGA GTCTCGTTCG TTTTTATTGG CAAAGAAATC TGGAGAGACT 
GCAGCAAAGT TTATTATTAA TTCACATCCC AAATATTTCC AAAAGGATAT AGCTGAGCCT 
CATATACCGT GCTTAATGCC CGAGTACTTG GAGCCTCAGA TTGAAGGTGT GAGTGAAGCT 
GCCCTGAAGG AACGAGTCAA ACTCAAAAGA GTCAAAGCTT CAGTGGACAT TTTTGACCAG 
CTCTTGCAAG CAGGAACCAC AGTCTCTCTT GAAACAACTA ATAGTCTTTT GGATTTATTG 
TGTTACTATG GTGATCAAGA GCCCCCAGCT GACTATCCTT TTCAACAAAC CGAACATTTG 
GAAAACTTGG AAGAGGCTGC TGAGGAAAAC AACCAAACAC CCAGGATGGA GTCTGGTCTT 
TGGAAAGCAC AAAACAATGC CGAGAGAATC TTTGCTCTGA TGCCAGAGAA AAATGCACGC 
TCCTACTGCA CGATGATCCG AGGGATGGTG AAGCACCGAG CTTATGCACA GGCGTTGAAC 
TTGTACACTG AGTTATTAAA TAACAGACTT AGTGCTGATG TATACACCTT TAATGCATTG 
ATTGAAGCAA AAACATTCAT TCCCAATGAG AAATTTGAGG AAAAATGGAA TGATATATTG 
GATCTACTAA GACATATGGT TGCACAGAAG GTAAAGCCAA ACCTGCAGAC GTTTAACACA 
ACGCTGAAAT GTCTCCGCAA GTTTCATTCA CTTGGAAGGC TACCAGCCTT ACAGATACTA 
CGTGAAATGA AACATATTGG AATAGAACCC TCACTTGCAA CTTACCATCA TATCATTCAC 
CTCTTTTACC CACGAGGTAG CTCTATAAAA ATACCATCCC TTATCATCTA TGATATCATG 
AATGAATTAG AGGGAAGAAC ATTTTCTCCA CAGGACCTGG ATGATGATAA ATTTTTCCAG 
TCGGCCATGA CTGTGTGTTC ATCTCTCAGA GATTTAGAGC TTGCTTACCA ATTACATGGT 
CTTTTAAACA CGGGAGACAA CCGGAAACTG ATTGGACCTG ATTCTCAGCG TAAAGCGTAT 
TATTCGAAGT TTTTCAGTTT GATTTGTTCA CTGGAACAAA TTGATGTCAC CCTGAAGTGG 
TATAAGGACC TGATACCTTC AGTATTTCTT CCCCACTCCC AAATATTCAT AGGTCTTCTT 
CAAGCAGTGG ATGTGGCCAA TAGGTTAGAA ATGGTTCCTC AGATTTGGAA AGACAGTAAA 
GAATATGGCC ATACTTTTCG AGGTGCCCTA AGAGAAGAAG TGTTGATGCT CATGGCCAGG 
GATAAACATT CACCAGAGCT TCAGGTTGCA TTTGCTGACT GTGCTGCTGA TATCAAATCC 
ACATATGAAA ACCAGGATGC CCGGCAGACA GCTCTTGATT GGCCAGCCAA CCCTTTACAT 
TATATAGCCT TCCTTTTTTT AAGAGGGGGC AGAACCCAGG AAGCCTGGGA GGTTGACCAC 
ACTATGAAGC AGGCTGTGAT GATTGGCGCA GGGGTACGGA CCTCAGCTGA GTCATGGGAG 
CTGAATGTAT GTGCTCTGCC TCTGTCTTGC ATGTGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_017448299.1
CDS	7..1965
Translation	MFHASPASRPCRRRAFPTCSARSSKMAAAAAARCLPFRSGLVLLRTTRETGVYEPKLCCRFYPGSESLPKVEGTDITGIEEIVIPKKKTWDKVAVLQALASTVTRDPTAAPYVFQDDPYLIPTSAMESRSFLLAKKSGETAAKFIINSHPKYFQKDIAEPHIPCLMPEYLEPQIEGVSEAALKERVKLKRVKASVDIFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPPADYPFQQTEHLENLEEAAEENNQTPRMESGLWKAQNNAERIFALMPEKNARSYCTMIRGMVKHRAYAQALNLYTELLNNRLSADVYTFNALIEAKTFIPNEKFEEKWNDILDLLRHMVAQKVKPNLQTFNTTLKCLRKFHSLGRLPALQILREMKHIGIEPSLATYHHIIHLFYPRGSSIKIPSLIIYDIMNELEGRTFSPQDLDDDKFFQSAMTVCSSLRDLELAYQLHGLLNTGDNRKLIGPDSQRKAYYSKFFSLICSLEQIDVTLKWYKDLIPSVFLPHSQIFIGLLQAVDVANRLEMVPQIWKDSKEYGHTFRGALREEVLMLMARDKHSPELQVAFADCAADIKSTYENQDARQTALDWPANPLHYIAFLFLRGGRTQEAWEVDHTMKQAVMIGAGVRTSAESWELNVCALPLSCMW

Target ORF information:

RefSeq Version	XM_017592810.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus Pentatricopeptide repeat domain 3 (Ptcd3), transcript variant X3, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_017592810.1

ORF Insert Sequence:

ATGTTCCACG CCAGCCCCGC CTCTCGACCC TGTAGGCGGA GGGCGTTCCC AACGTGCTCT 
GCGAGGAGTT CAAAGATGGC GGCGGCAGCG GCTGCTCGCT GTTTGCCCTT TCGCAGCGGT 
CTTGTCTTGC TGCGGACCAC TCGGGAAACG GGTGTGTATG AACCGAAGCT CTGTTGCAGA 
TTTTATCCTG GAAGTGAATC CCTCCCAAAG GTTGAAGGAA CAGATATAAC AGGGATTGAA 
GAAATAGTCA TTCCAAAAAA GAAAACATGG GATAAAGTGG CCGTTCTTCA AGCACTTGCA 
TCCACAGTAA CCAGGGATCC TACAGCTGCA CCTTACGTGT TTCAGGATGA CCCTTACCTC 
ATACCAACCT CTGCGATGGA GTCTCGTTCG TTTTTATTGG CAAAGAAATC TGGAGAGACT 
GCAGCAAAGT TTATTATTAA TTCACATCCC AAATATTTCC AAAAGGATAT AGCTGAGCCT 
CATATACCGT GCTTAATGCC CGAGTACTTG GAGCCTCAGA TTGAAGGTGT GAGTGAAGCT 
GCCCTGAAGG AACGAGTCAA ACTCAAAAGA GTCAAAGCTT CAGTGGACAT TTTTGACCAG 
CTCTTGCAAG CAGGAACCAC AGTCTCTCTT GAAACAACTA ATAGTCTTTT GGATTTATTG 
TGTTACTATG GTGATCAAGA GCCCCCAGCT GACTATCCTT TTCAACAAAC CGAACATTTG 
GAAAACTTGG AAGAGGCTGC TGAGGAAAAC AACCAAACAC CCAGGATGGA GTCTGGTCTT 
TGGAAAGCAC AAAACAATGC CGAGAGAATC TTTGCTCTGA TGCCAGAGAA AAATGCACGC 
TCCTACTGCA CGATGATCCG AGGGATGGTG AAGCACCGAG CTTATGCACA GGCGTTGAAC 
TTGTACACTG AGTTATTAAA TAACAGACTT AGTGCTGATG TATACACCTT TAATGCATTG 
ATTGAAGCAA AAACATTCAT TCCCAATGAG AAATTTGAGG AAAAATGGAA TGATATATTG 
GATCTACTAA GACATATGGT TGCACAGAAG GTAAAGCCAA ACCTGCAGAC GTTTAACACA 
ACGCTGAAAT GTCTCCGCAA GTTTCATTCA CTTGGAAGGC TACCAGCCTT ACAGATACTA 
CGTGAAATGA AACATATTGG AATAGAACCC TCACTTGCAA CTTACCATCA TATCATTCAC 
CTCTTTTACC CACGAGGTAG CTCTATAAAA ATACCATCCC TTATCATCTA TGATATCATG 
AATGAATTAG AGGGAAGAAC ATTTTCTCCA CAGGACCTGG ATGATGATAA ATTTTTCCAG 
TCGGCCATGA CTGTGTGTTC ATCTCTCAGA GATTTAGAGC TTGCTTACCA ATTACATGGT 
CTTTTAAACA CGGGAGACAA CCGGAAACTG ATTGGACCTG ATTCTCAGCG TAAAGCGTAT 
TATTCGAAGT TTTTCAGTTT GATTTGTTCA CTGGAACAAA TTGATGTCAC CCTGAAGTGG 
TATAAGGACC TGATACCTTC AGTATTTCTT CCCCACTCCC AAATATTCAT AGGTCTTCTT 
CAAGCAGTGG ATGTGGCCAA TAGGTTAGAA ATGGTTCCTC AGATTTGGAA AGACAGTAAA 
GAATATGGCC ATACTTTTCG AGGTGCCCTA AGAGAAGAAG TGTTGATGCT CATGGCCAGG 
GATAAACATT CACCAGAGCT TCAGGTTGCA TTTGCTGACT GTGCTGCTGA TATCAAATCC 
ACATATGAAA ACCAGGATGC CCGGCAGACA GCTCTTGATT GGCCAGCCAA CCCTTTACAT 
TATATAGCCT TCCTTTTTTT AAGAGGGGGC AGAACCCAGG AAGCCTGGGA GGTTGACCAC 
ACTATGAAGC AGGCTGTGAT GATTGGCGCA GGGGTACGGA CCTCAGCTGA GTCATGGGAG 
CTGAATGTAT GTGCTCTGCC TCTGTCTTGC ATGTGGTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.
Cell149(6)1393-406(2012 Jun)
Castello A,Fischer B,Eichelbaum K,Horos R,Beckmann BM,Strein C,Davey NE,Humphreys DT,Preiss T,Steinmetz LM,Krijgsveld J,Hentze MW

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Molecular cell46(5)674-90(2012 Jun)
Baltz AG,Munschauer M,Schwanh?usser B,Vasile A,Murakawa Y,Schueler M,Youngs N,Penfold-Brown D,Drew K,Milek M,Wyler E,Bonneau R,Selbach M,Dieterich C,Landthaler M

Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation.
FEBS letters583(12)1853-8(2009 Jun)
Davies SM,Rackham O,Shearwood AM,Hamilton KL,Narsai R,Whelan J,Filipovska A

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Ptcd3 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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