Slitrk6 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene
Clones
gRNAs

Summary

Gene Symbol	Slitrk6
Entrez Gene ID	290467
Full Name	SLIT and NTRK-like family, member 6
General protein information	Preferred Names SLIT and NTRK-like family, member 6 Names SLIT and NTRK-like protein 6
Gene Type	protein-coding
Organism	Rattus norvegicus(Norway rat)
Genome	Chromosome: 15 Map Location: 15q23

mRNA and Protein(s)

mRNA	Protein	Name
NM_001106057.1	NP_001099527.1	SLIT and NTRK-like protein 6 precursor
XM_006252443.3	XP_006252505.1	SLIT and NTRK-like protein 6 isoform X1

Pathways from BioSystems

Homologies

Homo sapiens (human)	SLITRK6	NP_115605.2
Pan troglodytes (chimpanzee)	SLITRK6	XP_522691.2
	SLITRK6	XP_001093456.1
Canis lupus familiaris (dog)	SLITRK6	XP_005634068.1
Rattus norvegicus (Norway rat)	Slitrk6	NP_001099527.1
Gallus gallus (chicken)	SLITRK6	XP_003640598.1
Bos taurus (cattle)	SLITRK6	XP_005213943.1
Mus musculus (house mouse)	Slitrk6	NP_780708.1
Danio rerio (zebrafish)	slitrk6	XP_003197659.1
Xenopus tropicalis (tropical clawed frog)	slitrk6	XP_004911884.1

Gene Ontology
Bibliography

Related articles in PubMed

Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins.
Um JW, Pramanik G, Ko JS, Song MY, Lee D, Kim H, Park KS, S?dhof TC, Tabuchi K, Ko J
Cell reports6(6)1096-1109(2014 Mar)

SLITRK6 mutations cause myopia and deafness in humans and mice.
Tekin M, Chioza BA, Matsumoto Y, Diaz-Horta O, Cross HE, Duman D, Kokotas H, Moore-Barton HL, Sakoori K, Ota M, Odaka YS, Foster J 2nd, Cengiz FB, Tokgoz-Yilmaz S, Tekeli O, Grigoriadou M, Petersen MB, Sreekantan-Nair A, Gurtz K, Xia XJ, Pandya A, Patton MA, Young JI, Aruga J, Crosby AH
The Journal of clinical investigation123(5)2094-102(2013 May)

Impaired auditory-vestibular functions and behavioral abnormalities of Slitrk6-deficient mice.
Matsumoto Y, Katayama K, Okamoto T, Yamada K, Takashima N, Nagao S, Aruga J
PloS one6(1)e16497(2011 Jan)

Disorganized innervation and neuronal loss in the inner ear of Slitrk6-deficient mice.
Katayama K, Zine A, Ota M, Matsumoto Y, Inoue T, Fritzsch B, Aruga J
PloS one4(11)e7786(2009 Nov)

Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth.
Aruga J, Mikoshiba K
Molecular and cellular neurosciences24(1)117-29(2003 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Slitrk6 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Slitrk6 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ORa00112	NM_001106057.1 Latest version!	Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00
ORa00112	XM_006252443.3 Latest version!	Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$475.30 $679.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Slitrk6 ( NM_001106057.1 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> NP_001099527.1 Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), mRNA.

Price & Availability↑

CloneID	ORa00112
Clone ID Related Accession (Same CDS sequence)	NM_001106057.1 , XM_006252443.3
Accession Version	NM_001106057.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2523bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-05-27
Organism	Rattus norvegicus(Norway rat)
Product	SLIT and NTRK-like protein 6 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473951.1. On or before Oct 4, 2007 this sequence version replaced XM_224480.4, XM_001077765.1. ##Evidence-Data-START## Transcript exon combination :: CB605610.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00052296, SAMD00052297 [ECO:0000348] ##Evidence-Data-END##

ATGAAGCTGA GGATTTGTCT CCTTTATCCC TCTCTTCTTG CTTGTCTATC TCTACAGTCG 
CAGTCACCCA TGCCCCCAGT CAGAGGCTCT TGCGACACTC TTTGTACTTG TGAAGAGAAA 
GATGGCATAA TGATAATAAA TTGTGAAGAA AAGGGCATCA ATACATTATC CCAAATAAGT 
GTGCCACCGT CACGACCTTT CCACTTAAGT TTATTAAATA ATGGCTTGAC AACGCTCCAC 
ACAAATGACT TTTCTGGGCT TACCAATGCC CTTTCAATAC ACCTTGGATT TAACAACATA 
GCAGATATCG AGACAGGTGC ATTTAATGGC CTTGGACTTC TTAAACAACT TCATATCAAT 
CACAATTCCT TGGAGATTCT CAAAGAGGAT ACCTTCCACG GTTTGGAGAA CCTGGAATTT 
TTGCAGGCTG ATAATAATTT CATTACAGTG ATTGAACAGA GTGCCTTCAG TAAGCTCAAC 
AGGCTGAAAG TGTTAATTTT AAATGACAAT GCCATCGAGA GTCTTCCTCC AAACATATTT 
CGATTCGTTC CTTTAACCCA TCTAGATCTT CGTGGAAACC AGTTGCAAAC GTTGCCTTAT 
GTTGGCTTTT TAGAACACAT TGGCCGGATA TTGGATCTCC AGTTGGAGGA CAATAAGTGG 
GCCTGCAATT GTGAATTATT GCAGCTAAAG AACTGGCTGG AAAATATGCC TCCACAGTCT 
ATCATTGGTG ACGTCATATG CTACAGCCCT CCACTTTTCA AAGGAAGCAT ACTGAGCCGA 
TTGAAAAAGG AATCTATTTG CCCTACTCCC CCAGTGTATG AAGAGCACGA GGACCCAGCA 
GGGTCTTTGT TGGCCATAAC ATCTTCCACA AGTGACAGCC GCCTATCAAG CAAGAATACA 
TCCATTTTAA AACAACCCAC CAAAGCGCCA GGTTCCGTAC CTTACCTTAC GAAGCCGTCC 
ACTCAGCTTC CGGTACCCTA TTGTCCTGTT CCGTGCAACT GCAAAGTTCT CTCCCCTTCA 
GGACTTCTAA TCCACTGTCA GGAACGCAAT ATTGAAAGTG TGTCAGATCT GCAACCTCCT 
CCACACAATC CTAGAAAGCT GATCCTTGCA GGCAATATTA TTCATACTTT AATGAAGGCT 
GACCTGATGG ACTATTTCAC GTTGGAAATG CTTCACTTGG GAAACAATCG TATTGAAGTT 
CTTGAAGAAG GGTCATTTAT GAACCTGACA AGGCTCCAGA AACTCTATCT CAATGGCAAC 
CATCTGACCA AACTATATAA AGGCATGTTC CTTGGTCTTT CCAGTCTCGA GTATTTGTAT 
CTCGAGTACA ATGCGGTAAA GGAAATATTA CCAGGGACCT TCAACCCAAT GCCTAAACTG 
AAAGTTCTTT ATTTAAATAA CAATCTCCTT CACGTTTTAC CGGCACATAT TTTTTTAGGT 
ATTCCTCTAA CTAGAGTAAA TCTTAAAACA AACCAATTCA CCCATTTACC TGTAAGCAAC 
ATCTTAGATG ACCTTGACTT ACTGATACAG ATTGACCTTG AGGATAACCC ATGGGATTGC 
TCCTGTGACC TGGTTGGATT GCAGCAATGG ATACACAAGC TTGGCAAGGG CACCGTGACG 
GATGACATCC TCTGCGCTTC CCCAGGGCAT CTTGACAAAA AGGAATTAAA AGCCCTCAAC 
AGTGAACTTC TCTGCCCTGG TTTAGTGAAT AACCCTTCCA TGCCAACTCA GACTAGCTAC 
ATTATTGTCA CTTCTCCCAC AATGGCAGCC GATGCGGCTG GTACCCTTTT GAGTTCCCTA 
ACTGATGCTG TGCCCCTATC GGTTCTGATA TTAGGACTTC TGATTGTGTT CATAACTATT 
GTATTCTGCG CCGCGGGGAT AGTGGTATTT GTCCTCCACC GCAGAAGAAG ATACAAGAAG 
AAAAAGGTAG AGGAGCAACT GAGAGACACC AGTCCTGTAC ACCTGCAGTA CAGCATGTAT 
GGTCATAAAA CAACTCACCA TACAACGGAA AGGCCCTCTT CCTCTCTCTA CGAACAGCAC 
ATGGTGAGCC CAATGGTTCA CGTCTACAGA AGCCCATCCT TCGGTCCAAA GCATTTGGAA 
GAAGTTGAAG AAAGAAGTGA TAAAGAAGGA AACGATGCGA AGCATCTTCA AAGGAGCCTG 
TTGGAACGAG AAAATCATTC ACCCCTTACA GGTTCAAATA TGAAATACAA AGTCGTAGAC 
CAATCAACAG ATTTCCTACC TTTTCAGGAT GCGAGTTTAC TATACAGGAA CATTTTGGAC 
AAAGAAAGAG AACTTCAGCA GCTTGGCATC ACAGAGTACC TACGGAAAAA TATTGCTCAG 
CTCCAGCCAG ATGTAGAGGT TAACTATCCT GGAGCCCACG AGGAGCTGAA ACTAATGGAA 
ACTCTGATGT ACTCACGACC CAGGAAGGTG CTGGTAGAAC AGACTAAAAA TGAGTATTTT 
GAGCTCAAAG CGAACTTGCA TGCTGAGCCT GACTATCTAG AAGTCTTGGA ACAGCAGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001099527.1
CDS	548..3070
Translation	MKLRICLLYPSLLACLSLQSQSPMPPVRGSCDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCELLQLKNWLENMPPQSIIGDVICYSPPLFKGSILSRLKKESICPTPPVYEEHEDPAGSLLAITSSTSDSRLSSKNTSILKQPTKAPGSVPYLTKPSTQLPVPYCPVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIPLTRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALNSELLCPGLVNNPSMPTQTSYIIVTSPTMAADAAGTLLSSLTDAVPLSVLILGLLIVFITIVFCAAGIVVFVLHRRRRYKKKKVEEQLRDTSPVHLQYSMYGHKTTHHTTERPSSSLYEQHMVSPMVHVYRSPSFGPKHLEEVEERSDKEGNDAKHLQRSLLERENHSPLTGSNMKYKVVDQSTDFLPFQDASLLYRNILDKERELQQLGITEYLRKNIAQLQPDVEVNYPGAHEELKLMETLMYSRPRKVLVEQTKNEYFELKANLHAEPDYLEVLEQQT

Target ORF information:

RefSeq Version	NM_001106057.1
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001106057.1

ORF Insert Sequence:

ATGAAGCTGA GGATTTGTCT CCTTTATCCC TCTCTTCTTG CTTGTCTATC TCTACAGTCG 
CAGTCACCCA TGCCCCCAGT CAGAGGCTCT TGCGACACTC TTTGTACTTG TGAAGAGAAA 
GATGGCATAA TGATAATAAA TTGTGAAGAA AAGGGCATCA ATACATTATC CCAAATAAGT 
GTGCCACCGT CACGACCTTT CCACTTAAGT TTATTAAATA ATGGCTTGAC AACGCTCCAC 
ACAAATGACT TTTCTGGGCT TACCAATGCC CTTTCAATAC ACCTTGGATT TAACAACATA 
GCAGATATCG AGACAGGTGC ATTTAATGGC CTTGGACTTC TTAAACAACT TCATATCAAT 
CACAATTCCT TGGAGATTCT CAAAGAGGAT ACCTTCCACG GTTTGGAGAA CCTGGAATTT 
TTGCAGGCTG ATAATAATTT CATTACAGTG ATTGAACAGA GTGCCTTCAG TAAGCTCAAC 
AGGCTGAAAG TGTTAATTTT AAATGACAAT GCCATCGAGA GTCTTCCTCC AAACATATTT 
CGATTCGTTC CTTTAACCCA TCTAGATCTT CGTGGAAACC AGTTGCAAAC GTTGCCTTAT 
GTTGGCTTTT TAGAACACAT TGGCCGGATA TTGGATCTCC AGTTGGAGGA CAATAAGTGG 
GCCTGCAATT GTGAATTATT GCAGCTAAAG AACTGGCTGG AAAATATGCC TCCACAGTCT 
ATCATTGGTG ACGTCATATG CTACAGCCCT CCACTTTTCA AAGGAAGCAT ACTGAGCCGA 
TTGAAAAAGG AATCTATTTG CCCTACTCCC CCAGTGTATG AAGAGCACGA GGACCCAGCA 
GGGTCTTTGT TGGCCATAAC ATCTTCCACA AGTGACAGCC GCCTATCAAG CAAGAATACA 
TCCATTTTAA AACAACCCAC CAAAGCGCCA GGTTCCGTAC CTTACCTTAC GAAGCCGTCC 
ACTCAGCTTC CGGTACCCTA TTGTCCTGTT CCGTGCAACT GCAAAGTTCT CTCCCCTTCA 
GGACTTCTAA TCCACTGTCA GGAACGCAAT ATTGAAAGTG TGTCAGATCT GCAACCTCCT 
CCACACAATC CTAGAAAGCT GATCCTTGCA GGCAATATTA TTCATACTTT AATGAAGGCT 
GACCTGATGG ACTATTTCAC GTTGGAAATG CTTCACTTGG GAAACAATCG TATTGAAGTT 
CTTGAAGAAG GGTCATTTAT GAACCTGACA AGGCTCCAGA AACTCTATCT CAATGGCAAC 
CATCTGACCA AACTATATAA AGGCATGTTC CTTGGTCTTT CCAGTCTCGA GTATTTGTAT 
CTCGAGTACA ATGCGGTAAA GGAAATATTA CCAGGGACCT TCAACCCAAT GCCTAAACTG 
AAAGTTCTTT ATTTAAATAA CAATCTCCTT CACGTTTTAC CGGCACATAT TTTTTTAGGT 
ATTCCTCTAA CTAGAGTAAA TCTTAAAACA AACCAATTCA CCCATTTACC TGTAAGCAAC 
ATCTTAGATG ACCTTGACTT ACTGATACAG ATTGACCTTG AGGATAACCC ATGGGATTGC 
TCCTGTGACC TGGTTGGATT GCAGCAATGG ATACACAAGC TTGGCAAGGG CACCGTGACG 
GATGACATCC TCTGCGCTTC CCCAGGGCAT CTTGACAAAA AGGAATTAAA AGCCCTCAAC 
AGTGAACTTC TCTGCCCTGG TTTAGTGAAT AACCCTTCCA TGCCAACTCA GACTAGCTAC 
ATTATTGTCA CTTCTCCCAC AATGGCAGCC GATGCGGCTG GTACCCTTTT GAGTTCCCTA 
ACTGATGCTG TGCCCCTATC GGTTCTGATA TTAGGACTTC TGATTGTGTT CATAACTATT 
GTATTCTGCG CCGCGGGGAT AGTGGTATTT GTCCTCCACC GCAGAAGAAG ATACAAGAAG 
AAAAAGGTAG AGGAGCAACT GAGAGACACC AGTCCTGTAC ACCTGCAGTA CAGCATGTAT 
GGTCATAAAA CAACTCACCA TACAACGGAA AGGCCCTCTT CCTCTCTCTA CGAACAGCAC 
ATGGTGAGCC CAATGGTTCA CGTCTACAGA AGCCCATCCT TCGGTCCAAA GCATTTGGAA 
GAAGTTGAAG AAAGAAGTGA TAAAGAAGGA AACGATGCGA AGCATCTTCA AAGGAGCCTG 
TTGGAACGAG AAAATCATTC ACCCCTTACA GGTTCAAATA TGAAATACAA AGTCGTAGAC 
CAATCAACAG ATTTCCTACC TTTTCAGGAT GCGAGTTTAC TATACAGGAA CATTTTGGAC 
AAAGAAAGAG AACTTCAGCA GCTTGGCATC ACAGAGTACC TACGGAAAAA TATTGCTCAG 
CTCCAGCCAG ATGTAGAGGT TAACTATCCT GGAGCCCACG AGGAGCTGAA ACTAATGGAA 
ACTCTGATGT ACTCACGACC CAGGAAGGTG CTGGTAGAAC AGACTAAAAA TGAGTATTTT 
GAGCTCAAAG CGAACTTGCA TGCTGAGCCT GACTATCTAG AAGTCTTGGA ACAGCAGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Slitrk6 ( XM_006252443.3 ) cDNA ORF clone, Rattus norvegicus(Norway rat) -> XP_006252505.1 Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), transcript variant X1, mRNA.

Price & Availability↑

CloneID	ORa00112
Clone ID Related Accession (Same CDS sequence)	NM_001106057.1 , XM_006252443.3
Accession Version	XM_006252443.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2523bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2016-07-25
Organism	Rattus norvegicus(Norway rat)
Product	SLIT and NTRK-like protein 6 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005114.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jul 26, 2016 this sequence version replaced XM_006252443.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAAGCTGA GGATTTGTCT CCTTTATCCC TCTCTTCTTG CTTGTCTATC TCTACAGTCG 
CAGTCACCCA TGCCCCCAGT CAGAGGCTCT TGCGACACTC TTTGTACTTG TGAAGAGAAA 
GATGGCATAA TGATAATAAA TTGTGAAGAA AAGGGCATCA ATACATTATC CCAAATAAGT 
GTGCCACCGT CACGACCTTT CCACTTAAGT TTATTAAATA ATGGCTTGAC AACGCTCCAC 
ACAAATGACT TTTCTGGGCT TACCAATGCC CTTTCAATAC ACCTTGGATT TAACAACATA 
GCAGATATCG AGACAGGTGC ATTTAATGGC CTTGGACTTC TTAAACAACT TCATATCAAT 
CACAATTCCT TGGAGATTCT CAAAGAGGAT ACCTTCCACG GTTTGGAGAA CCTGGAATTT 
TTGCAGGCTG ATAATAATTT CATTACAGTG ATTGAACAGA GTGCCTTCAG TAAGCTCAAC 
AGGCTGAAAG TGTTAATTTT AAATGACAAT GCCATCGAGA GTCTTCCTCC AAACATATTT 
CGATTCGTTC CTTTAACCCA TCTAGATCTT CGTGGAAACC AGTTGCAAAC GTTGCCTTAT 
GTTGGCTTTT TAGAACACAT TGGCCGGATA TTGGATCTCC AGTTGGAGGA CAATAAGTGG 
GCCTGCAATT GTGAATTATT GCAGCTAAAG AACTGGCTGG AAAATATGCC TCCACAGTCT 
ATCATTGGTG ACGTCATATG CTACAGCCCT CCACTTTTCA AAGGAAGCAT ACTGAGCCGA 
TTGAAAAAGG AATCTATTTG CCCTACTCCC CCAGTGTATG AAGAGCACGA GGACCCAGCA 
GGGTCTTTGT TGGCCATAAC ATCTTCCACA AGTGACAGCC GCCTATCAAG CAAGAATACA 
TCCATTTTAA AACAACCCAC CAAAGCGCCA GGTTCCGTAC CTTACCTTAC GAAGCCGTCC 
ACTCAGCTTC CGGTACCCTA TTGTCCTGTT CCGTGCAACT GCAAAGTTCT CTCCCCTTCA 
GGACTTCTAA TCCACTGTCA GGAACGCAAT ATTGAAAGTG TGTCAGATCT GCAACCTCCT 
CCACACAATC CTAGAAAGCT GATCCTTGCA GGCAATATTA TTCATACTTT AATGAAGGCT 
GACCTGATGG ACTATTTCAC GTTGGAAATG CTTCACTTGG GAAACAATCG TATTGAAGTT 
CTTGAAGAAG GGTCATTTAT GAACCTGACA AGGCTCCAGA AACTCTATCT CAATGGCAAC 
CATCTGACCA AACTATATAA AGGCATGTTC CTTGGTCTTT CCAGTCTCGA GTATTTGTAT 
CTCGAGTACA ATGCGGTAAA GGAAATATTA CCAGGGACCT TCAACCCAAT GCCTAAACTG 
AAAGTTCTTT ATTTAAATAA CAATCTCCTT CACGTTTTAC CGGCACATAT TTTTTTAGGT 
ATTCCTCTAA CTAGAGTAAA TCTTAAAACA AACCAATTCA CCCATTTACC TGTAAGCAAC 
ATCTTAGATG ACCTTGACTT ACTGATACAG ATTGACCTTG AGGATAACCC ATGGGATTGC 
TCCTGTGACC TGGTTGGATT GCAGCAATGG ATACACAAGC TTGGCAAGGG CACCGTGACG 
GATGACATCC TCTGCGCTTC CCCAGGGCAT CTTGACAAAA AGGAATTAAA AGCCCTCAAC 
AGTGAACTTC TCTGCCCTGG TTTAGTGAAT AACCCTTCCA TGCCAACTCA GACTAGCTAC 
ATTATTGTCA CTTCTCCCAC AATGGCAGCC GATGCGGCTG GTACCCTTTT GAGTTCCCTA 
ACTGATGCTG TGCCCCTATC GGTTCTGATA TTAGGACTTC TGATTGTGTT CATAACTATT 
GTATTCTGCG CCGCGGGGAT AGTGGTATTT GTCCTCCACC GCAGAAGAAG ATACAAGAAG 
AAAAAGGTAG AGGAGCAACT GAGAGACACC AGTCCTGTAC ACCTGCAGTA CAGCATGTAT 
GGTCATAAAA CAACTCACCA TACAACGGAA AGGCCCTCTT CCTCTCTCTA CGAACAGCAC 
ATGGTGAGCC CAATGGTTCA CGTCTACAGA AGCCCATCCT TCGGTCCAAA GCATTTGGAA 
GAAGTTGAAG AAAGAAGTGA TAAAGAAGGA AACGATGCGA AGCATCTTCA AAGGAGCCTG 
TTGGAACGAG AAAATCATTC ACCCCTTACA GGTTCAAATA TGAAATACAA AGTCGTAGAC 
CAATCAACAG ATTTCCTACC TTTTCAGGAT GCGAGTTTAC TATACAGGAA CATTTTGGAC 
AAAGAAAGAG AACTTCAGCA GCTTGGCATC ACAGAGTACC TACGGAAAAA TATTGCTCAG 
CTCCAGCCAG ATGTAGAGGT TAACTATCCT GGAGCCCACG AGGAGCTGAA ACTAATGGAA 
ACTCTGATGT ACTCACGACC CAGGAAGGTG CTGGTAGAAC AGACTAAAAA TGAGTATTTT 
GAGCTCAAAG CGAACTTGCA TGCTGAGCCT GACTATCTAG AAGTCTTGGA ACAGCAGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_006252505.1
CDS	784..3306
Translation	MKLRICLLYPSLLACLSLQSQSPMPPVRGSCDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLLNNGLTTLHTNDFSGLTNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNFITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVPLTHLDLRGNQLQTLPYVGFLEHIGRILDLQLEDNKWACNCELLQLKNWLENMPPQSIIGDVICYSPPLFKGSILSRLKKESICPTPPVYEEHEDPAGSLLAITSSTSDSRLSSKNTSILKQPTKAPGSVPYLTKPSTQLPVPYCPVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLILAGNIIHTLMKADLMDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLEYNAVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIPLTRVNLKTNQFTHLPVSNILDDLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALNSELLCPGLVNNPSMPTQTSYIIVTSPTMAADAAGTLLSSLTDAVPLSVLILGLLIVFITIVFCAAGIVVFVLHRRRRYKKKKVEEQLRDTSPVHLQYSMYGHKTTHHTTERPSSSLYEQHMVSPMVHVYRSPSFGPKHLEEVEERSDKEGNDAKHLQRSLLERENHSPLTGSNMKYKVVDQSTDFLPFQDASLLYRNILDKERELQQLGITEYLRKNIAQLQPDVEVNYPGAHEELKLMETLMYSRPRKVLVEQTKNEYFELKANLHAEPDYLEVLEQQT

Target ORF information:

RefSeq Version	XM_006252443.3
Organism	Rattus norvegicus(Norway rat)
Definition	Rattus norvegicus SLIT and NTRK-like family, member 6 (Slitrk6), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_006252443.3

ORF Insert Sequence:

ATGAAGCTGA GGATTTGTCT CCTTTATCCC TCTCTTCTTG CTTGTCTATC TCTACAGTCG 
CAGTCACCCA TGCCCCCAGT CAGAGGCTCT TGCGACACTC TTTGTACTTG TGAAGAGAAA 
GATGGCATAA TGATAATAAA TTGTGAAGAA AAGGGCATCA ATACATTATC CCAAATAAGT 
GTGCCACCGT CACGACCTTT CCACTTAAGT TTATTAAATA ATGGCTTGAC AACGCTCCAC 
ACAAATGACT TTTCTGGGCT TACCAATGCC CTTTCAATAC ACCTTGGATT TAACAACATA 
GCAGATATCG AGACAGGTGC ATTTAATGGC CTTGGACTTC TTAAACAACT TCATATCAAT 
CACAATTCCT TGGAGATTCT CAAAGAGGAT ACCTTCCACG GTTTGGAGAA CCTGGAATTT 
TTGCAGGCTG ATAATAATTT CATTACAGTG ATTGAACAGA GTGCCTTCAG TAAGCTCAAC 
AGGCTGAAAG TGTTAATTTT AAATGACAAT GCCATCGAGA GTCTTCCTCC AAACATATTT 
CGATTCGTTC CTTTAACCCA TCTAGATCTT CGTGGAAACC AGTTGCAAAC GTTGCCTTAT 
GTTGGCTTTT TAGAACACAT TGGCCGGATA TTGGATCTCC AGTTGGAGGA CAATAAGTGG 
GCCTGCAATT GTGAATTATT GCAGCTAAAG AACTGGCTGG AAAATATGCC TCCACAGTCT 
ATCATTGGTG ACGTCATATG CTACAGCCCT CCACTTTTCA AAGGAAGCAT ACTGAGCCGA 
TTGAAAAAGG AATCTATTTG CCCTACTCCC CCAGTGTATG AAGAGCACGA GGACCCAGCA 
GGGTCTTTGT TGGCCATAAC ATCTTCCACA AGTGACAGCC GCCTATCAAG CAAGAATACA 
TCCATTTTAA AACAACCCAC CAAAGCGCCA GGTTCCGTAC CTTACCTTAC GAAGCCGTCC 
ACTCAGCTTC CGGTACCCTA TTGTCCTGTT CCGTGCAACT GCAAAGTTCT CTCCCCTTCA 
GGACTTCTAA TCCACTGTCA GGAACGCAAT ATTGAAAGTG TGTCAGATCT GCAACCTCCT 
CCACACAATC CTAGAAAGCT GATCCTTGCA GGCAATATTA TTCATACTTT AATGAAGGCT 
GACCTGATGG ACTATTTCAC GTTGGAAATG CTTCACTTGG GAAACAATCG TATTGAAGTT 
CTTGAAGAAG GGTCATTTAT GAACCTGACA AGGCTCCAGA AACTCTATCT CAATGGCAAC 
CATCTGACCA AACTATATAA AGGCATGTTC CTTGGTCTTT CCAGTCTCGA GTATTTGTAT 
CTCGAGTACA ATGCGGTAAA GGAAATATTA CCAGGGACCT TCAACCCAAT GCCTAAACTG 
AAAGTTCTTT ATTTAAATAA CAATCTCCTT CACGTTTTAC CGGCACATAT TTTTTTAGGT 
ATTCCTCTAA CTAGAGTAAA TCTTAAAACA AACCAATTCA CCCATTTACC TGTAAGCAAC 
ATCTTAGATG ACCTTGACTT ACTGATACAG ATTGACCTTG AGGATAACCC ATGGGATTGC 
TCCTGTGACC TGGTTGGATT GCAGCAATGG ATACACAAGC TTGGCAAGGG CACCGTGACG 
GATGACATCC TCTGCGCTTC CCCAGGGCAT CTTGACAAAA AGGAATTAAA AGCCCTCAAC 
AGTGAACTTC TCTGCCCTGG TTTAGTGAAT AACCCTTCCA TGCCAACTCA GACTAGCTAC 
ATTATTGTCA CTTCTCCCAC AATGGCAGCC GATGCGGCTG GTACCCTTTT GAGTTCCCTA 
ACTGATGCTG TGCCCCTATC GGTTCTGATA TTAGGACTTC TGATTGTGTT CATAACTATT 
GTATTCTGCG CCGCGGGGAT AGTGGTATTT GTCCTCCACC GCAGAAGAAG ATACAAGAAG 
AAAAAGGTAG AGGAGCAACT GAGAGACACC AGTCCTGTAC ACCTGCAGTA CAGCATGTAT 
GGTCATAAAA CAACTCACCA TACAACGGAA AGGCCCTCTT CCTCTCTCTA CGAACAGCAC 
ATGGTGAGCC CAATGGTTCA CGTCTACAGA AGCCCATCCT TCGGTCCAAA GCATTTGGAA 
GAAGTTGAAG AAAGAAGTGA TAAAGAAGGA AACGATGCGA AGCATCTTCA AAGGAGCCTG 
TTGGAACGAG AAAATCATTC ACCCCTTACA GGTTCAAATA TGAAATACAA AGTCGTAGAC 
CAATCAACAG ATTTCCTACC TTTTCAGGAT GCGAGTTTAC TATACAGGAA CATTTTGGAC 
AAAGAAAGAG AACTTCAGCA GCTTGGCATC ACAGAGTACC TACGGAAAAA TATTGCTCAG 
CTCCAGCCAG ATGTAGAGGT TAACTATCCT GGAGCCCACG AGGAGCTGAA ACTAATGGAA 
ACTCTGATGT ACTCACGACC CAGGAAGGTG CTGGTAGAAC AGACTAAAAA TGAGTATTTT 
GAGCTCAAAG CGAACTTGCA TGCTGAGCCT GACTATCTAG AAGTCTTGGA ACAGCAGACA 
TAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins.
Cell reports6(6)1096-1109(2014 Mar)
Um JW,Pramanik G,Ko JS,Song MY,Lee D,Kim H,Park KS,S?dhof TC,Tabuchi K,Ko J

SLITRK6 mutations cause myopia and deafness in humans and mice.
The Journal of clinical investigation123(5)2094-102(2013 May)
Tekin M,Chioza BA,Matsumoto Y,Diaz-Horta O,Cross HE,Duman D,Kokotas H,Moore-Barton HL,Sakoori K,Ota M,Odaka YS,Foster J 2nd,Cengiz FB,Tokgoz-Yilmaz S,Tekeli O,Grigoriadou M,Petersen MB,Sreekantan-Nair A,Gurtz K,Xia XJ,Pandya A,Patton MA,Young JI,Aruga J,Crosby AH

Impaired auditory-vestibular functions and behavioral abnormalities of Slitrk6-deficient mice.
PloS one6(1)e16497(2011 Jan)
Matsumoto Y,Katayama K,Okamoto T,Yamada K,Takashima N,Nagao S,Aruga J

Disorganized innervation and neuronal loss in the inner ear of Slitrk6-deficient mice.
PloS one4(11)e7786(2009 Nov)
Katayama K,Zine A,Ota M,Matsumoto Y,Inoue T,Fritzsch B,Aruga J

Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth.
Molecular and cellular neurosciences24(1)117-29(2003 Sep)
Aruga J,Mikoshiba K

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Slitrk6 cDNA ORF clone, Rattus norvegicus(Norway rat)

Gene

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gRNAs

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Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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