Gene Symbol | LOC4352605 |
Entrez Gene ID | 4352605 |
Full Name | asparagine synthetase domain-containing protein 1 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
ORF » Species Summary » Oryza sativa Japonica Group » LOC4352605 cDNA ORF clone
Gene Symbol | LOC4352605 |
Entrez Gene ID | 4352605 |
Full Name | asparagine synthetase domain-containing protein 1 |
Gene Type | protein-coding |
Organism | Oryza sativa Japonica Group(Japanese rice) |
mRNA | Protein | Name |
---|---|---|
NM_001361140.1 | NP_001348069.1 | asparagine synthetase domain-containing protein 1 |
XM_015764857.1 | XP_015620343.1 | asparagine synthetase domain-containing protein 1 |
XM_026022037.1 | XP_025877822.1 | asparagine synthetase domain-containing protein 1 isoform X1 |
XM_026022038.1 | XP_025877823.1 | asparagine synthetase domain-containing protein 1 isoform X2 |
Saccharomyces cerevisiae (baker's yeast) | YML096W | NP_013613.1 |
Magnaporthe oryzae (rice blast fungus) | MGG_05371 | XP_003710217.1 |
Arabidopsis thaliana (thale cress) | AT2G03667 | NP_001077875.2 |
Xenopus tropicalis (tropical clawed frog) | asnsd1 | XP_002931571.1 |
Mus musculus (house mouse) | Asnsd1 | NP_598489.2 |
ASNSD1 | XP_001106941.1 | |
Kluyveromyces lactis | KLLA0D10285g | XP_453519.1 |
Oryza sativa (rice) | Os12g0574900 | NP_001067104.1 |
Pan troglodytes (chimpanzee) | ASNSD1 | XP_515983.3 |
Rattus norvegicus (Norway rat) | Asnsd1 | NP_001100233.1 |
Danio rerio (zebrafish) | asnsd1 | NP_956389.1 |
Schizosaccharomyces pombe (fission yeast) | SPBC4F6.11c | NP_596111.1 |
Homo sapiens (human) | ASNSD1 | NP_061921.1 |
Canis lupus familiaris (dog) | ASNSD1 | XP_005640497.1 |
Bos taurus (cattle) | ASNSD1 | NP_001029852.1 |
Gallus gallus (chicken) | ASNSD1 | NP_001006509.1 |
Drosophila melanogaster (fruit fly) | CG17486 | NP_001036446.2 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP010492 | XP_001237560.2 |
Caenorhabditis elegans (roundworm) | M18.3 | NP_502296.1 |
Eremothecium gossypii | AGOS_ADL350C | NP_983745.2 |
Neurospora crassa | NCU07300 | XP_962154.1 |
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
, , Kikuchi S, Satoh K, Nagata T, Kawagashira N, Doi K, Kishimoto N, Yazaki J, Ishikawa M, Yamada H, Ooka H, Hotta I, Kojima K, Namiki T, Ohneda E, Yahagi W, Suzuki K, Li CJ, Ohtsuki K, Shishiki T, , Otomo Y, Murakami K, Iida Y, Sugano S, Fujimura T, Suzuki Y, Tsunoda Y, Kurosaki T, Kodama T, Masuda H, Kobayashi M, Xie Q, Lu M, Narikawa R, Sugiyama A, Mizuno K, Yokomizo S, Niikura J, Ikeda R, Ishibiki J, Kawamata M, Yoshimura A, Miura J, Kusumegi T, Oka M, Ryu R, Ueda M, Matsubara K, , Kawai J, Carninci P, Adachi J, Aizawa K, Arakawa T, Fukuda S, Hara A, Hashizume W, Hayatsu N, Imotani K, Ishii Y, Itoh M, Kagawa I, Kondo S, Konno H, Miyazaki A, Osato N, Ota Y, Saito R, Sasaki D, Sato K, Shibata K, Shinagawa A, Shiraki T, Yoshino M, Hayashizaki Y, Yasunishi A
Science (New York, N.Y.)301(5631)376-9(2003 Jul)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC4352605 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC4352605 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OOa43846 | |
Clone ID Related Accession (Same CDS sequence) | NM_001361140.1 , XM_026022037.1 | |
Accession Version | NM_001361140.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2010bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-05-04 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | asparagine synthetase domain-containing protein 1 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK102088.1. ##Evidence-Data-START## Transcript exon combination :: AK102088.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03003383 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001348069.1 |
CDS | 12..2021 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001361140.1 |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa43846 | |
Clone ID Related Accession (Same CDS sequence) | NM_001361140.1 , XM_026022037.1 | |
Accession Version | XM_026022037.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2010bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | asparagine synthetase domain-containing protein 1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029267.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025877822.1 |
CDS | 6..2015 |
Translation |
Target ORF information:
Target ORF information:
|
XM_026022037.1 |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa43648 | |
Clone ID Related Accession (Same CDS sequence) | XM_015764857.1 , XM_026022038.1 | |
Accession Version | XM_015764857.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2976bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-02-29 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | asparagine synthetase domain-containing protein 1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379185.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015620343.1 |
CDS | 49..3024 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015764857.1 |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OOa43648 | |
Clone ID Related Accession (Same CDS sequence) | XM_015764857.1 , XM_026022038.1 | |
Accession Version | XM_026022038.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2976bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-08-06 | |
Organism | Oryza sativa Japonica Group(Japanese rice) | |
Product | asparagine synthetase domain-containing protein 1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029267.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_025877823.1 |
CDS | 51..3026 |
Translation |
Target ORF information:
Target ORF information:
|
XM_026022038.1 |
1 | ATGTGCGGCA TAGCCCTCGT CCTCTCCGGC GGCGGCCGCG TAGTCGTCGC TCCCTCCGCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. |