ORF » Species Summary » Oryza sativa Japonica Group » LOC107277929 cDNA ORF clone

LOC107277929 cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice)

The following LOC107277929 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC107277929 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OOa27968 XM_015769637.1
Latest version!		 Oryza sativa Japonica Group uncharacterized LOC107277929 (LOC107277929), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $104.30
$149.00
OOa45924 XM_015769637.2
Latest version!		 Oryza sativa Japonica Group ESX-1 secretion-associated protein EspI (LOC107277929), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $223.30
$319.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    LOC107277929 ( XM_015769637.1 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015625123.1 Oryza sativa Japonica Group uncharacterized LOC107277929 (LOC107277929), transcript variant X1, mRNA.
    Price & Availability↑
    CloneID OOa27968
    Clone ID Related Accession (Same CDS sequence) XM_015769637.1
    Accession Version XM_015769637.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 327bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2016-02-29
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product uncharacterized protein LOC107277929
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015379175.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oryza sativa Japonica Group Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## 

    1
    61
    121
    181
    241
    301
    ATGATCCCCG GCGACGGAAC GGGTCATGGT GGCCAGGGAG GATACTCGGG CCCGACGAGC 
    TCCCGGCGTC TCAGTGATGC CGCCCTGTTT TCGCGGTTGA CCCCGGCACC AGCCCCTTCC 
    TCTGGCCACG TGCGAGTTCG AGATTCCAAG TCCCGGTGGT CGGATTTCTC AACCCCGGCA 
    CTGGCCTCGC ACAGGCTGCG ATCCGCTCGC CAACAAGGCT TGTGTAGAGA AGAAAAGGTG 
    GAATTGTGGA AGGTAATCGC GGGGAGTTTT GGTTCATTTT TTGAAGATTT CTCTAATTGC 
    TTACTGCAGG AGAGGATAAC AAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015625123.1
    CDS513..839
    Translation

    Target ORF information:

    RefSeq Version XM_015769637.1
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group uncharacterized LOC107277929 (LOC107277929), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015769637.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    ATGATCCCCG GCGACGGAAC GGGTCATGGT GGCCAGGGAG GATACTCGGG CCCGACGAGC 
    TCCCGGCGTC TCAGTGATGC CGCCCTGTTT TCGCGGTTGA CCCCGGCACC AGCCCCTTCC 
    TCTGGCCACG TGCGAGTTCG AGATTCCAAG TCCCGGTGGT CGGATTTCTC AACCCCGGCA 
    CTGGCCTCGC ACAGGCTGCG ATCCGCTCGC CAACAAGGCT TGTGTAGAGA AGAAAAGGTG 
    GAATTGTGGA AGGTAATCGC GGGGAGTTTT GGTTCATTTT TTGAAGATTT CTCTAATTGC 
    TTACTGCAGG AGAGGATAAC AAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    LOC107277929 ( XM_015769637.2 ) cDNA ORF clone, Oryza sativa Japonica Group(Japanese rice) -> XP_015625123.2 Oryza sativa Japonica Group ESX-1 secretion-associated protein EspI (LOC107277929), mRNA.
    Price & Availability↑
    CloneID OOa45924
    Clone ID Related Accession (Same CDS sequence) XM_015769637.2
    Accession Version XM_015769637.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1239bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-08-06
    Organism Oryza sativa Japonica Group(Japanese rice)
    Product uncharacterized protein LOC107277929
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029257.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2018 this sequence version replaced XM_015769637.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGAAGGACA GTGAATTACT TGGAGAGGAT TTGGGCATCA AGATCCTTGC GGATGTTGAA 
    GGCGGATCCG TAGATGGCTT CCGCGCCGAA CCTCTTCTTG TCCGCCCAGA ACTTGGCCTC 
    CTGCGCGCGC GGCGGGGATT CAGCGTGTTA GCTAGGGTTT CGAGGGCGAG AGGGGGGGAG 
    AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG AAGACCTTGT GGACGCTGGC CTGGAGCGGG 
    TGCGGCGGCG CGAGGTCCCC CTTGACGCTG TCGTTGACGC CGAAGCGGAC GACGTCGTGG 
    TTCCCGCCGA TCTCCTTCTT CACCACGCCG CCGCTCGCCA TCGTCGCCTG CGAAGCTCTC 
    TCTCTCTCTC TCTCTCTCTT CACTCATCAC TCATTCTTTC ATTACTCATG GAACGGTCCA 
    GATCATCTCT GTGTAAAATC CAACGCTCAG GATCGTCTCC ACCTCTCCAC CGCGCCCTCC 
    TCTCCGCCCC CTTTCTCTCG CTCTCACGCG TCCCCGCCCC TCCCCAACCG CGCGCCGCTC 
    CCCAACCCTA ATCTCTCCCT CTCACGCGGC GCCACCGCCG TCGTCGCCGC CCTCGACTGC 
    CGCTGCTCCG CCGTCGTCGC ATCCGTCGTC TCGCCGCCAC CGATCCCCGC GCCACCACCA 
    TCGCCGCCGC CCTCGACTGC CGCCACTCCG CCGTCACCCA TCGTCGCATC CGTCGTCGCC 
    GCCGCCCTCG ACTGCCGCCG CTCCGCCGTC GTCGCCGCCA CCCTCGACTG CCGCCGCTCC 
    GCCTTCGTCG CATCCGTCGT CTCGCCGCCA CCGATCCCCG CCGCCGGCTC GCCCTCAACC 
    AATCCCCATC ACCGTCGTCG CATCCGTCGT CGTCCAGGAT TTACGTCACC GTTCCGTCAC 
    CGCACCCACA CGATGATCCC CGGCGACGGA ACGGGTCATG GTGGCCAGGG AGGATACTCG 
    GGCCCGACGA GCTCCCGGCG TCTCAGTGAT GCCGCCCTGT TTTCGCGGTT GACCCCGGCA 
    CCAGCCCCTT CCTCTGGCCA CGTGCGAGTT CGAGATTCCA AGTCCCGGTG GTCGGATTTC 
    TCAACCCCGG CACTGGCCTC GCACAGGCTG CGATCCGCTC GCCAACAAGG CTTGTGTAGA 
    GAAGAAAAGG TGGAATTGTG GAAGGTAATC GCGGGGAGTT TTGGTTCATT TTTTGAAGAT 
    TTCTCTAATT GCTTACTGCA GGAGAGGATA ACAAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_015625123.2
    CDS1..1239
    Translation

    Target ORF information:

    RefSeq Version XM_015769637.2
    Organism Oryza sativa Japonica Group(Japanese rice)
    Definition Oryza sativa Japonica Group ESX-1 secretion-associated protein EspI (LOC107277929), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_015769637.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGAAGGACA GTGAATTACT TGGAGAGGAT TTGGGCATCA AGATCCTTGC GGATGTTGAA 
    GGCGGATCCG TAGATGGCTT CCGCGCCGAA CCTCTTCTTG TCCGCCCAGA ACTTGGCCTC 
    CTGCGCGCGC GGCGGGGATT CAGCGTGTTA GCTAGGGTTT CGAGGGCGAG AGGGGGGGAG 
    AAGAAGAAGA AGAAGAAGAA GAAGAAGAAG AAGACCTTGT GGACGCTGGC CTGGAGCGGG 
    TGCGGCGGCG CGAGGTCCCC CTTGACGCTG TCGTTGACGC CGAAGCGGAC GACGTCGTGG 
    TTCCCGCCGA TCTCCTTCTT CACCACGCCG CCGCTCGCCA TCGTCGCCTG CGAAGCTCTC 
    TCTCTCTCTC TCTCTCTCTT CACTCATCAC TCATTCTTTC ATTACTCATG GAACGGTCCA 
    GATCATCTCT GTGTAAAATC CAACGCTCAG GATCGTCTCC ACCTCTCCAC CGCGCCCTCC 
    TCTCCGCCCC CTTTCTCTCG CTCTCACGCG TCCCCGCCCC TCCCCAACCG CGCGCCGCTC 
    CCCAACCCTA ATCTCTCCCT CTCACGCGGC GCCACCGCCG TCGTCGCCGC CCTCGACTGC 
    CGCTGCTCCG CCGTCGTCGC ATCCGTCGTC TCGCCGCCAC CGATCCCCGC GCCACCACCA 
    TCGCCGCCGC CCTCGACTGC CGCCACTCCG CCGTCACCCA TCGTCGCATC CGTCGTCGCC 
    GCCGCCCTCG ACTGCCGCCG CTCCGCCGTC GTCGCCGCCA CCCTCGACTG CCGCCGCTCC 
    GCCTTCGTCG CATCCGTCGT CTCGCCGCCA CCGATCCCCG CCGCCGGCTC GCCCTCAACC 
    AATCCCCATC ACCGTCGTCG CATCCGTCGT CGTCCAGGAT TTACGTCACC GTTCCGTCAC 
    CGCACCCACA CGATGATCCC CGGCGACGGA ACGGGTCATG GTGGCCAGGG AGGATACTCG 
    GGCCCGACGA GCTCCCGGCG TCTCAGTGAT GCCGCCCTGT TTTCGCGGTT GACCCCGGCA 
    CCAGCCCCTT CCTCTGGCCA CGTGCGAGTT CGAGATTCCA AGTCCCGGTG GTCGGATTTC 
    TCAACCCCGG CACTGGCCTC GCACAGGCTG CGATCCGCTC GCCAACAAGG CTTGTGTAGA 
    GAAGAAAAGG TGGAATTGTG GAAGGTAATC GCGGGGAGTT TTGGTTCATT TTTTGAAGAT 
    TTCTCTAATT GCTTACTGCA GGAGAGGATA ACAAAATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

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