LOC100136320 cDNA ORF clone, Oncorhynchus mykiss(rainbow trout)

Gene
Clones
gRNAs

Summary

Gene Symbol	LOC100136320
Entrez Gene ID	100136320
Full Name	TNF superfamily member 11
Gene Type	protein-coding
Organism	Oncorhynchus mykiss(rainbow trout)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001124568.1	NP_001118040.1	TNF superfamily member 11
XM_021608228.1	XP_021463903.1	TNF superfamily member 11 isoform X1

Pathways from BioSystems
Gene Ontology

The following LOC100136320 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC100136320 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OOf00883	NM_001124568.1 Latest version!	Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$174.30 $249.00
OOf01632	XM_021608228.1 Latest version!	Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), transcript variant X1, mRNA.	pcDNA3.1-C-(k)DYK or customized vector	9-11	$174.30 $249.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

LOC100136320 ( NM_001124568.1 ) cDNA ORF clone, Oncorhynchus mykiss(rainbow trout) -> NP_001118040.1 Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), mRNA.

Price & Availability↑

CloneID	OOf00883
Clone ID Related Accession (Same CDS sequence)	NM_001124568.1
Accession Version	NM_001124568.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 780bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-07-02
Organism	Oncorhynchus mykiss(rainbow trout)
Product	TNF superfamily member 11
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from DQ218471.1. ##Evidence-Data-START## Transcript exon combination :: DQ218471.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMD00041048, SAMD00041049 [ECO:0000348] ##Evidence-Data-END##

ATGGAAAACA GTCTGGCAAG ACTTCAGCAG CTCAGGAGAA CAGAAGCAAC TTCAAACAGA 
ACTCTTATTG GTACCGTCGT TTTCATGGGA TTACTTCAAG TGGTATCAAG TGTTGCTGTT 
GTACTTCACT TGACAGGTCA TCTTCAACAG GTCACCCAGA CCGGACCAGC CCTAGTTGAG 
ACTTCGGACG ACCTCCAGAG AGGGGAGTCA CAGAGGTGCC CAAAAAACCC CAGGGAGGTC 
ATACCATCAG CCCACCTGCC CATTCAGCCT CCCAGTGGGC ACATCCAGAG AGATATCCAG 
AATACCATGA TCCACTGGGA CCACGCCCAT GGACACCTGT CCAAGATCGG GTACCATGAC 
GGCAGGATCC TGGTCCGCGA GGGAGGCCTG TACTACATCT ATGCCAAAAC CTGCTTCAGG 
TACTACGACC AGGTAGAGGA GTCACTGTTG GAGTCTGGGT CTCATACTCC AGGGAGAAAA 
GGGGCTTCAG CAGAGCCTAG CATTCACAGA GAAGATGGGG TCGGGGCTGG TGCCCTTCTT 
ATACAATACG TGTTCCACGA GCGTCACAGT CACAGTGCCC CCCCCAGGCC AGCTGTGTTG 
ATGAAAAGCG GCAGCACCAA GCACTGGCAG AGGGGCCACT ACCACATGTG TTGTCAGCAG 
CAGGGAGGGG CTTTCCCCCT GGGGCCCGGG GACAGTATCT ACGTCAGCGT GTCCAACTCC 
TGGCTGCTGG ACCCGGAAGC TGAGGGAAGC TACTTCGGGG CCTTCAGAAT CAGCAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001118040.1
CDS	93..872
Translation	MENSLARLQQLRRTEATSNRTLIGTVVFMGLLQVVSSVAVVLHLTGHLQQVTQTGPALVETSDDLQRGESQRCPKNPREVIPSAHLPIQPPSGHIQRDIQNTMIHWDHAHGHLSKIGYHDGRILVREGGLYYIYAKTCFRYYDQVEESLLESGSHTPGRKGASAEPSIHREDGVGAGALLIQYVFHERHSHSAPPRPAVLMKSGSTKHWQRGHYHMCCQQQGGAFPLGPGDSIYVSVSNSWLLDPEAEGSYFGAFRISR

Target ORF information:

RefSeq Version	NM_001124568.1
Organism	Oncorhynchus mykiss(rainbow trout)
Definition	Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001124568.1

ORF Insert Sequence:

ATGGAAAACA GTCTGGCAAG ACTTCAGCAG CTCAGGAGAA CAGAAGCAAC TTCAAACAGA 
ACTCTTATTG GTACCGTCGT TTTCATGGGA TTACTTCAAG TGGTATCAAG TGTTGCTGTT 
GTACTTCACT TGACAGGTCA TCTTCAACAG GTCACCCAGA CCGGACCAGC CCTAGTTGAG 
ACTTCGGACG ACCTCCAGAG AGGGGAGTCA CAGAGGTGCC CAAAAAACCC CAGGGAGGTC 
ATACCATCAG CCCACCTGCC CATTCAGCCT CCCAGTGGGC ACATCCAGAG AGATATCCAG 
AATACCATGA TCCACTGGGA CCACGCCCAT GGACACCTGT CCAAGATCGG GTACCATGAC 
GGCAGGATCC TGGTCCGCGA GGGAGGCCTG TACTACATCT ATGCCAAAAC CTGCTTCAGG 
TACTACGACC AGGTAGAGGA GTCACTGTTG GAGTCTGGGT CTCATACTCC AGGGAGAAAA 
GGGGCTTCAG CAGAGCCTAG CATTCACAGA GAAGATGGGG TCGGGGCTGG TGCCCTTCTT 
ATACAATACG TGTTCCACGA GCGTCACAGT CACAGTGCCC CCCCCAGGCC AGCTGTGTTG 
ATGAAAAGCG GCAGCACCAA GCACTGGCAG AGGGGCCACT ACCACATGTG TTGTCAGCAG 
CAGGGAGGGG CTTTCCCCCT GGGGCCCGGG GACAGTATCT ACGTCAGCGT GTCCAACTCC 
TGGCTGCTGG ACCCGGAAGC TGAGGGAAGC TACTTCGGGG CCTTCAGAAT CAGCAGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

LOC100136320 ( XM_021608228.1 ) cDNA ORF clone, Oncorhynchus mykiss(rainbow trout) -> XP_021463903.1 Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), transcript variant X1, mRNA.

Price & Availability↑

CloneID	OOf01632
Clone ID Related Accession (Same CDS sequence)	XM_021608228.1
Accession Version	XM_021608228.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 645bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-06-26
Organism	Oncorhynchus mykiss(rainbow trout)
Product	TNF superfamily member 11 isoform X1
Comment	Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_035083.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Oncorhynchus mykiss Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

ATGAATGGCT CTGAGGTCAC CCAGACCGGA CCAGCCCTAG TTGAGACTTC GGACGACCTC 
CAGAGAGGGG AGTCACAGAG GTGCCCAAAA AAACCCAGGG AGGTCATACC ATCAGCCCAC 
CTGCCCATTC AGCCTCCCAG TGGGCACATC CAGAGAGATA TCCAGAATAC CATGATCCAC 
TGGGACCACG CCCATGGACA CCTGTCCAAG ATCGGGTACC ATGACGGCAG GATCCTGGTC 
CGCGAGGGAG GCCTGTACTA CATCTATGCC AAAACCTGCT TCAGGTACTA CGACCAGGTA 
GAGGAGTCAC TGTTGGAGTC TGGGTCTCAT ACTCCAGGGA GAAAAGGGGC TTCAGCAGAG 
CCTAGCATTC ACAGAGAAGA TGGGGTCGGG GCTGGTGCCC TTCTTATACA ATACGTGTTC 
CACGAGCGTC ACAGTCACAG TGCCCCCCCC AGGCCAGCTG TGTTGATGAA AAGCGGCAGC 
ACCAAGCACT GGCAGAGGGG CCACTACCAC ATGTGTTGTC AGCAGCAGGG AGGGGCTTTC 
CCCCTGGGGC CCGGGGACAG TATCTACGTC AGCGTGTCCA ACTCCTGGCT GCTGGACCCG 
GAAGCTGAGG GAAGCTACTT CGGGGCCTTC AGAATCAGCA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	XP_021463903.1
CDS	121..765
Translation	MNGSEVTQTGPALVETSDDLQRGESQRCPKKPREVIPSAHLPIQPPSGHIQRDIQNTMIHWDHAHGHLSKIGYHDGRILVREGGLYYIYAKTCFRYYDQVEESLLESGSHTPGRKGASAEPSIHREDGVGAGALLIQYVFHERHSHSAPPRPAVLMKSGSTKHWQRGHYHMCCQQQGGAFPLGPGDSIYVSVSNSWLLDPEAEGSYFGAFRISR

Target ORF information:

RefSeq Version	XM_021608228.1
Organism	Oncorhynchus mykiss(rainbow trout)
Definition	Oncorhynchus mykiss TNF superfamily member 11 (LOC100136320), transcript variant X1, mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

XM_021608228.1

ORF Insert Sequence:

ATGAATGGCT CTGAGGTCAC CCAGACCGGA CCAGCCCTAG TTGAGACTTC GGACGACCTC 
CAGAGAGGGG AGTCACAGAG GTGCCCAAAA AAACCCAGGG AGGTCATACC ATCAGCCCAC 
CTGCCCATTC AGCCTCCCAG TGGGCACATC CAGAGAGATA TCCAGAATAC CATGATCCAC 
TGGGACCACG CCCATGGACA CCTGTCCAAG ATCGGGTACC ATGACGGCAG GATCCTGGTC 
CGCGAGGGAG GCCTGTACTA CATCTATGCC AAAACCTGCT TCAGGTACTA CGACCAGGTA 
GAGGAGTCAC TGTTGGAGTC TGGGTCTCAT ACTCCAGGGA GAAAAGGGGC TTCAGCAGAG 
CCTAGCATTC ACAGAGAAGA TGGGGTCGGG GCTGGTGCCC TTCTTATACA ATACGTGTTC 
CACGAGCGTC ACAGTCACAG TGCCCCCCCC AGGCCAGCTG TGTTGATGAA AAGCGGCAGC 
ACCAAGCACT GGCAGAGGGG CCACTACCAC ATGTGTTGTC AGCAGCAGGG AGGGGCTTTC 
CCCCTGGGGC CCGGGGACAG TATCTACGTC AGCGTGTCCA ACTCCTGGCT GCTGGACCCG 
GAAGCTGAGG GAAGCTACTT CGGGGCCTTC AGAATCAGCA GATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.