Pcdha2 cDNA ORF clone, Mus musculus(house mouse)

Gene
Clones
gRNAs

Summary

Gene Symbol	Pcdha2
Entrez Gene ID	353234
Full Name	protocadherin alpha 2
General protein information	Preferred Names protocadherin alpha 2 Names protocadherin alpha-2
Gene Type	protein-coding
Organism	Mus musculus(house mouse)
Genome	Chromosome: 18 Map Location: 18\|18 B2-B3

mRNA and Protein(s)

mRNA	Protein	Name
NM_198117.2	NP_932785.1	protocadherin alpha-2 precursor

Pathways from BioSystems

Homologies

	LOC698874	XP_002804600.1
Gallus gallus (chicken)	PCDHA7	NP_001104607.1
Gallus gallus (chicken)	PCDHA9	NP_001104609.1
Gallus gallus (chicken)	PCDHA3	NP_001104603.1
Homo sapiens (human)	PCDHA2	NP_061728.1
Pan troglodytes (chimpanzee)	PCDHA2	NP_001076052.1
Mus musculus (house mouse)	Pcdha2	NP_932785.1
Gallus gallus (chicken)	PCDHA11	NP_001104598.1
Gallus gallus (chicken)	PCDHA4	NP_001104604.1
Gallus gallus (chicken)	PCDHA12	NP_001104599.1
Rattus norvegicus (Norway rat)	Pcdha2	NP_955798.1
Gallus gallus (chicken)	PCDHA2	NP_001104602.1
Gallus gallus (chicken)	PCDHA6	NP_001104606.1

Gene Ontology
Bibliography

Related articles in PubMed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.
Toyoda S, Kawaguchi M, Kobayashi T, Tarusawa E, Toyama T, Okano M, Oda M, Nakauchi H, Yoshimura Y, Sanbo M, Hirabayashi M, Hirayama T, Hirabayashi T, Yagi T
Neuron82(1)94-108(2014 Apr)

Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.
Esumi S, Kakazu N, Taguchi Y, Hirayama T, Sasaki A, Hirabayashi T, Koide T, Kitsukawa T, Hamada S, Yagi T
Nature genetics37(2)171-6(2005 Feb)

CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity.
Morishita H, Murata Y, Esumi S, Hamada S, Yagi T
Neuroreport15(17)2595-9(2004 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Pcdha2 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Pcdha2 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OMu07979	NM_198117.2 Latest version!	Mus musculus protocadherin alpha 2 (Pcdha2), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$559.30 $799.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Pcdha2 ( NM_198117.2 ) cDNA ORF clone, Mus musculus(house mouse) -> NP_932785.1 Mus musculus protocadherin alpha 2 (Pcdha2), mRNA.

Price & Availability↑

CloneID	OMu07979
Clone ID Related Accession (Same CDS sequence)	NM_198117.2
Accession Version	NM_198117.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2847bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-09-10
Organism	Mus musculus(house mouse)
Product	protocadherin alpha-2 precursor
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC030897.1, AY013760.1 and AI850242.1. On Apr 29, 2009 this sequence version replaced NM_198117.1. ##Evidence-Data-START## Transcript exon combination :: AY013760.1, CV557792.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN00849384, SAMN01164131 [ECO:0000348] ##Evidence-Data-END##

ATGCCTTCTT TGAGAGGGGG CCCAGAGGTC AGGCAGTGTC TGCTGCTCTT GCTTCCTTTC 
CTCGCAGCCT GGGAGGCAGG GAACGGCCAG CTCCACTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACTT TTGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGAC GGAGCTGGTG 
CCCCGCCTGT TCAGGGTGGC TTCCAAGGAC CGCGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAGTGTAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCACGTGGAG 
GTGGAGGTGA GGGACATTAA CGACAACCCG CCGCGATTTC CAATGACAGA AAAAACTATC 
CAGTTTTCCG AATCTAGGTC GCTTGACTCA AGGTTTCCTT TAGAGGGAGC CTCTGATGCA 
GATATCGGAG TAAATGCTCT TCTGTCCTAC AAGCTCAGCC CCAGTGAGCT TTTCTTTCTA 
GATGTTCAAA CAAGCGACGA ACTAAGCCAA TCTCTGTTTC TTGTGCTGGG AAAATCTCTG 
GACAGAGAGG AGGATGCGGA GGTGAAATTG TTACTGGTAG CTACTGATGG AGGCAAGCCT 
GAGCTCACCG GCACTGTTCA AATACTCATC AAGGTGTTAG ATGTGAATGA CAACGAACCT 
ACTTTCCCCC AATCCGTTTA CAAAGTACAG TTGTTAGAGA ACACTGCAAA CGGAACCTTA 
GTGATGAAAT TAAATGCTTC TGATGCAGAT GAAGGATCAA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCTTC CACCACACGG ACTAAGTTTC AAATCGACCC CAACTCAGGA 
GAAGTCAGAA CTAAGGGAGA GTTAGATTAT GAAGAAAGGA CATCCTATGA AATCCAGGTC 
ATTGCATCTG ACAAGGGAAC CCCAGCGATG TCAGGACATT GTAAAATTTC AGTAAAACTT 
GTGGATATCA ATGACAATAC GCCAGAAGTC TCAATAACGT CTCTCTCACT ACCCGTGCAA 
GAGAATGCTC CCCTGGGTGC TGTCATCGCC CTCATCTCAG TGTCAGATCG TGACTCGGGA 
GTCAATGGGC AGGTGACCTG CTCCCTGAGT CCTCATGTCC CCTTCAAGCT GGTGTCCACT 
TTCAAGAATT ACTATTCTCT CGTGCTGGAC AGCGCCTTGG ACCGGGAAGC CACAGCTGAC 
TATAAGGTAA TGGTGACAGC GCGGGATGGG GGCTCGCCCT CGCTACGGGC CACGGCCAGC 
GTGTCTGTGG AGGTGGCTGA CGTGAACGAC AATGCTCCAG TGTTCGCTCA GCCCGAATAC 
ACCGTGTTTG TGAAGGAGAA CAATCCACCA GGAGCGCACA TCTTCACGGT GTCAGCGATG 
GATGCTGACG CACAGGAGAA TGCGCTGGTG TCCTACTCGC TGGTGGAGCG GAGGGTGGGC 
GAGCGCTTGC TGTCTAGCTA TGTGTCTGTG CATGCGGAGA GCGGCAAGGT GTTCGCTCTG 
CAGCCTCTGG ACCATGAGGA GCTGGAGCTG CTGCAGTTTC AGGTGACTGC GAGGGATGCT 
GGTGTGCCTG CCCTGGGCAG CAATGTGACT CTGCAGGTGT TTGTGCTGGA TGAGAATGAC 
AATGCACCCT TGCTGCTGCC TCAGGGAGCT GTGGGAGTTG GCGGCTCAGT GAGCGAGCTT 
GTACCTAGGT CAGTGGGTTC GGGCCATGTA GTCACCAAGG TGCGTGCCGT GGATGCGGAT 
TCTGGTTACA ACGCGTGGCT GTCATATGAA CTGCAATCCA CAGTGGGCAT GCGTAGCCTG 
TTCCGCGTGG GTCTGTATAC AGGCGAGATC AGCACCACGC GAGCCCTAGA TGAAGTGGAT 
GCGCCACGCC AGCGCCTGCT AGTGTTGGTG AAGGACCATG GTGAGCCTTC GCTGACTGCC 
ACAGCCACAG TGTTAGTTTC TCTAGTTGAG AATAGTCAAG CTCCAAAAAC TTCATCAAGA 
GCGTTGGTAG ATGCTGCTGG CCAAGAGGCG TCTCTGGTGA CTGTTAACGT GTACCTGGTC 
ATCGCCATCT GCGCGGTGTC CAGCCTGTTG GTGCTCACGC TGCTGCTGTA CACAGCGCTG 
CGCTGCTCAG CGATGCCCAC TGATGGAGCC TGTGCTCCGG GGAGGCCCAT GCTGGTGTGC 
TCCAGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GACAGAGAGT GTGCTCTGGA 
GAAGGCCCCC CTAAGACTGA TCTCATGGCC TTCAGCCCTA GCCTATCCCA AGGTCCGGAA 
TCAGCAGAAG AGAGACAACC ACCCTTAGAG GCCGAATACT TAGGAAAGCC CCGGCAGCCC 
AACCCTGACT GGCGCTACTC TGCCTCGCTA AGAGCAGGCA TGCACAGCTC TGTGCACCTG 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC TGAGGCAGGA GAGGTGTCCC CTCCGGTGGG CGCCGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAGTC CGGTCCCGGT 
GAGTTGCCAG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTGCTAACA ACCAAATTGA CAAAAGCGAT TTTATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACGG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_932785.1
CDS	114..2960
Translation	MPSLRGGPEVRQCLLLLLPFLAAWEAGNGQLHYSVPEEAKHGTFVGRIAQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVRDINDNPPRFPMTEKTIQFSESRSLDSRFPLEGASDADIGVNALLSYKLSPSELFFLDVQTSDELSQSLFLVLGKSLDREEDAEVKLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYEIQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLVLDSALDREATADYKVMVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVTARDAGVPALGSNVTLQVFVLDENDNAPLLLPQGAVGVGGSVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQSTVGMRSLFRVGLYTGEISTTRALDEVDAPRQRLLVLVKDHGEPSLTATATVLVSLVENSQAPKTSSRALVDAAGQEASLVTVNVYLVIAICAVSSLLVLTLLLYTALRCSAMPTDGACAPGRPMLVCSSAVGSWSYSQQRRQRVCSGEGPPKTDLMAFSPSLSQGPESAEERQPPLEAEYLGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ

Target ORF information:

RefSeq Version	NM_198117.2
Organism	Mus musculus(house mouse)
Definition	Mus musculus protocadherin alpha 2 (Pcdha2), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_198117.2

ORF Insert Sequence:

ATGCCTTCTT TGAGAGGGGG CCCAGAGGTC AGGCAGTGTC TGCTGCTCTT GCTTCCTTTC 
CTCGCAGCCT GGGAGGCAGG GAACGGCCAG CTCCACTACT CCGTCCCCGA GGAGGCCAAA 
CACGGCACTT TTGTGGGCCG CATCGCGCAG GACCTGGGGC TGGAGCTGAC GGAGCTGGTG 
CCCCGCCTGT TCAGGGTGGC TTCCAAGGAC CGCGGGGACC TTCTGGAGGT AAATCTGCAG 
AATGGCATTT TGTTTGTGAA TTCTCGGATC GACCGGGAGG AGCTGTGCGG GCGGAGCGCG 
GAGTGTAGCA TCCACCTGGA GGTGATCGTG GACAGGCCGC TGCAGGTTTT CCACGTGGAG 
GTGGAGGTGA GGGACATTAA CGACAACCCG CCGCGATTTC CAATGACAGA AAAAACTATC 
CAGTTTTCCG AATCTAGGTC GCTTGACTCA AGGTTTCCTT TAGAGGGAGC CTCTGATGCA 
GATATCGGAG TAAATGCTCT TCTGTCCTAC AAGCTCAGCC CCAGTGAGCT TTTCTTTCTA 
GATGTTCAAA CAAGCGACGA ACTAAGCCAA TCTCTGTTTC TTGTGCTGGG AAAATCTCTG 
GACAGAGAGG AGGATGCGGA GGTGAAATTG TTACTGGTAG CTACTGATGG AGGCAAGCCT 
GAGCTCACCG GCACTGTTCA AATACTCATC AAGGTGTTAG ATGTGAATGA CAACGAACCT 
ACTTTCCCCC AATCCGTTTA CAAAGTACAG TTGTTAGAGA ACACTGCAAA CGGAACCTTA 
GTGATGAAAT TAAATGCTTC TGATGCAGAT GAAGGATCAA ACAGCGAGAT TGTGTATTCA 
CTCGGTAGTG ATGTGTCTTC CACCACACGG ACTAAGTTTC AAATCGACCC CAACTCAGGA 
GAAGTCAGAA CTAAGGGAGA GTTAGATTAT GAAGAAAGGA CATCCTATGA AATCCAGGTC 
ATTGCATCTG ACAAGGGAAC CCCAGCGATG TCAGGACATT GTAAAATTTC AGTAAAACTT 
GTGGATATCA ATGACAATAC GCCAGAAGTC TCAATAACGT CTCTCTCACT ACCCGTGCAA 
GAGAATGCTC CCCTGGGTGC TGTCATCGCC CTCATCTCAG TGTCAGATCG TGACTCGGGA 
GTCAATGGGC AGGTGACCTG CTCCCTGAGT CCTCATGTCC CCTTCAAGCT GGTGTCCACT 
TTCAAGAATT ACTATTCTCT CGTGCTGGAC AGCGCCTTGG ACCGGGAAGC CACAGCTGAC 
TATAAGGTAA TGGTGACAGC GCGGGATGGG GGCTCGCCCT CGCTACGGGC CACGGCCAGC 
GTGTCTGTGG AGGTGGCTGA CGTGAACGAC AATGCTCCAG TGTTCGCTCA GCCCGAATAC 
ACCGTGTTTG TGAAGGAGAA CAATCCACCA GGAGCGCACA TCTTCACGGT GTCAGCGATG 
GATGCTGACG CACAGGAGAA TGCGCTGGTG TCCTACTCGC TGGTGGAGCG GAGGGTGGGC 
GAGCGCTTGC TGTCTAGCTA TGTGTCTGTG CATGCGGAGA GCGGCAAGGT GTTCGCTCTG 
CAGCCTCTGG ACCATGAGGA GCTGGAGCTG CTGCAGTTTC AGGTGACTGC GAGGGATGCT 
GGTGTGCCTG CCCTGGGCAG CAATGTGACT CTGCAGGTGT TTGTGCTGGA TGAGAATGAC 
AATGCACCCT TGCTGCTGCC TCAGGGAGCT GTGGGAGTTG GCGGCTCAGT GAGCGAGCTT 
GTACCTAGGT CAGTGGGTTC GGGCCATGTA GTCACCAAGG TGCGTGCCGT GGATGCGGAT 
TCTGGTTACA ACGCGTGGCT GTCATATGAA CTGCAATCCA CAGTGGGCAT GCGTAGCCTG 
TTCCGCGTGG GTCTGTATAC AGGCGAGATC AGCACCACGC GAGCCCTAGA TGAAGTGGAT 
GCGCCACGCC AGCGCCTGCT AGTGTTGGTG AAGGACCATG GTGAGCCTTC GCTGACTGCC 
ACAGCCACAG TGTTAGTTTC TCTAGTTGAG AATAGTCAAG CTCCAAAAAC TTCATCAAGA 
GCGTTGGTAG ATGCTGCTGG CCAAGAGGCG TCTCTGGTGA CTGTTAACGT GTACCTGGTC 
ATCGCCATCT GCGCGGTGTC CAGCCTGTTG GTGCTCACGC TGCTGCTGTA CACAGCGCTG 
CGCTGCTCAG CGATGCCCAC TGATGGAGCC TGTGCTCCGG GGAGGCCCAT GCTGGTGTGC 
TCCAGCGCGG TGGGGAGCTG GTCATACTCG CAGCAGAGGC GACAGAGAGT GTGCTCTGGA 
GAAGGCCCCC CTAAGACTGA TCTCATGGCC TTCAGCCCTA GCCTATCCCA AGGTCCGGAA 
TCAGCAGAAG AGAGACAACC ACCCTTAGAG GCCGAATACT TAGGAAAGCC CCGGCAGCCC 
AACCCTGACT GGCGCTACTC TGCCTCGCTA AGAGCAGGCA TGCACAGCTC TGTGCACCTG 
GAGGAGGCTG GCATTCTACG GGCTGGTCCA GGAGGGCCTG ATCAGCAGTG GCCAACAGTA 
TCCAGTGCAA CACCAGAACC TGAGGCAGGA GAGGTGTCCC CTCCGGTGGG CGCCGGTGTC 
AACAGCAACA GCTGGACCTT TAAATACGGA CCAGGCAACC CCAAACAGTC CGGTCCCGGT 
GAGTTGCCAG ACAAATTCAT TATCCCAGGA TCTCCTGCAA TCATCTCCAT CCGGCAGGAG 
CCTGCTAACA ACCAAATTGA CAAAAGCGAT TTTATAACCT TCGGCAAAAA GGAGGAGACC 
AAGAAAAAGA AGAAAAAGAA GAAGGGTAAC AAGACCCAGG AGAAAAAAGA GAAAGGGAAC 
AGCACGACGG ACAACAGTGA CCAGTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.
Neuron82(1)94-108(2014 Apr)
Toyoda S,Kawaguchi M,Kobayashi T,Tarusawa E,Toyama T,Okano M,Oda M,Nakauchi H,Yoshimura Y,Sanbo M,Hirabayashi M,Hirayama T,Hirabayashi T,Yagi T

Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.
Nature genetics37(2)171-6(2005 Feb)
Esumi S,Kakazu N,Taguchi Y,Hirayama T,Sasaki A,Hirabayashi T,Koide T,Kitsukawa T,Hamada S,Yagi T

CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity.
Neuroreport15(17)2595-9(2004 Dec)
Morishita H,Murata Y,Esumi S,Hamada S,Yagi T

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Pcdha2 cDNA ORF clone, Mus musculus(house mouse)

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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