ORF » Species Summary » Medicago truncatula » MTR_2g083000 cDNA ORF clone

MTR_2g083000 cDNA ORF clone, Medicago truncatula(barrel medic)

The following MTR_2g083000 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the MTR_2g083000 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe206852 XM_003596588.1
Latest version!		 Medicago truncatula gibberellin 2-beta-dioxygenase partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $174.30
$249.00
OMe260355 XM_003596588.2
Latest version!		 Medicago truncatula gibberellin 2-beta-dioxygenase 8 (LOC11416613), mRNA. pcDNA3.1-C-(k)DYK or customized vector 9-11 $139.30
$199.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    MTR_2g083000 ( XM_003596588.1 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003596636.1 Medicago truncatula gibberellin 2-beta-dioxygenase partial mRNA.
    Price & Availability↑
    CloneID OMe206852
    Clone ID Related Accession (Same CDS sequence) XM_003596588.1
    Accession Version XM_003596588.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 984bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product gibberellin 2-beta-dioxygenase
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016408). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTATG AACCACCATT TTTACAGACC TACATGAGCC TTTTGCAAGG CACCAATGAT 
    CTTATTAGTG ACCTAAGTGA TGTAGAGAAG CGTGAGATAC CTCTAATTGA TCTCAAACGT 
    TTAAAACTTG ACCAACTTGA GAGAGAAGAA TGCATGAAAG AAATCACTGA AGCTGCTAGA 
    AAATGGGGTT TTTTCCAAGT TGTGAATCAT GGAGTTTCAC AAGAGGTGCT AAAGAACATG 
    CAGTTTGAAG AAAAGGAAGT GTTCCGAACA CCTTTTGGAA TTAAATCACA AGAGAATTTT 
    TTGAACTTGC CTTCTAGAAC TTATAGGTGG GGCAACGCTT CTGCCATTAA TCCAAAACAA 
    CTTATGTGGT CAGAAGCATT ACACATATTT CTTCCTGATA TAGAAAAAAT GGACCAACAC 
    AAAAGTTTGA GATCAAGTAT TGAATCTTTT GTAAAAGTAG TTACCCCTCT GGCAGAGAAC 
    TTGGTGCAAA TTCTAGCTCA AGAGCTGAAC ATAAACTTCA GCTATTTCCA ACAGAATTGT 
    TCAGCAAATA CTAGTTATCT TCGCTTGAAT AGATATCCAC CATGTCCATT TCCTTCAAAG 
    GTGATTGGCC TTTTACCTCA TGCTGATACT AGTTTCATTA CTATAGTTCA TCAAGATCAT 
    ATTGGGGGAT TGCAATTAAT GAAAGATGGA AAGTGGATTA GTGTCAAACC TAATTCTGAA 
    GCTCTCATTG TTAATGTTGG AGATTTATTC CAGGCACTAA GCAATGGACT GTACACGAGT 
    GTTGGACATC GAGTGGTAGC TGCTGAGAAA GTGGAGAGGT TTTCTTTGGC ATATTTCTAT 
    GGCCCTTCCA TTGATGCTGT GATAGAGAGC TATGCCACGC CGCCACTTTA TAGAAAATTT 
    ACATTTGGAG AGTACAAAGA GCAAACAATG AAAGATCTTA AGGAAGGTGG TGATAAAGTG 
    GGGATATCTA GGTTTCTCTT ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003596636.1
    CDS1..984
    Translation

    Target ORF information:

    RefSeq Version XM_003596588.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula gibberellin 2-beta-dioxygenase partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003596588.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    ATGGATTATG AACCACCATT TTTACAGACC TACATGAGCC TTTTGCAAGG CACCAATGAT 
    CTTATTAGTG ACCTAAGTGA TGTAGAGAAG CGTGAGATAC CTCTAATTGA TCTCAAACGT 
    TTAAAACTTG ACCAACTTGA GAGAGAAGAA TGCATGAAAG AAATCACTGA AGCTGCTAGA 
    AAATGGGGTT TTTTCCAAGT TGTGAATCAT GGAGTTTCAC AAGAGGTGCT AAAGAACATG 
    CAGTTTGAAG AAAAGGAAGT GTTCCGAACA CCTTTTGGAA TTAAATCACA AGAGAATTTT 
    TTGAACTTGC CTTCTAGAAC TTATAGGTGG GGCAACGCTT CTGCCATTAA TCCAAAACAA 
    CTTATGTGGT CAGAAGCATT ACACATATTT CTTCCTGATA TAGAAAAAAT GGACCAACAC 
    AAAAGTTTGA GATCAAGTAT TGAATCTTTT GTAAAAGTAG TTACCCCTCT GGCAGAGAAC 
    TTGGTGCAAA TTCTAGCTCA AGAGCTGAAC ATAAACTTCA GCTATTTCCA ACAGAATTGT 
    TCAGCAAATA CTAGTTATCT TCGCTTGAAT AGATATCCAC CATGTCCATT TCCTTCAAAG 
    GTGATTGGCC TTTTACCTCA TGCTGATACT AGTTTCATTA CTATAGTTCA TCAAGATCAT 
    ATTGGGGGAT TGCAATTAAT GAAAGATGGA AAGTGGATTA GTGTCAAACC TAATTCTGAA 
    GCTCTCATTG TTAATGTTGG AGATTTATTC CAGGCACTAA GCAATGGACT GTACACGAGT 
    GTTGGACATC GAGTGGTAGC TGCTGAGAAA GTGGAGAGGT TTTCTTTGGC ATATTTCTAT 
    GGCCCTTCCA TTGATGCTGT GATAGAGAGC TATGCCACGC CGCCACTTTA TAGAAAATTT 
    ACATTTGGAG AGTACAAAGA GCAAACAATG AAAGATCTTA AGGAAGGTGG TGATAAAGTG 
    GGGATATCTA GGTTTCTCTT ATAG

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    MTR_2g083000 ( XM_003596588.2 ) cDNA ORF clone, Medicago truncatula(barrel medic) -> XP_003596636.2 Medicago truncatula gibberellin 2-beta-dioxygenase 8 (LOC11416613), mRNA.
    Price & Availability↑
    CloneID OMe260355
    Clone ID Related Accession (Same CDS sequence) XM_003596588.2
    Accession Version XM_003596588.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 951bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product gibberellin 2-beta-dioxygenase 8
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016408.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003596588.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGCCTTT TGCAAGGCAC CAATGATCTT ATTAGTGACC TAAGTGATGT AGAGAAGCGT 
    GAGATACCTC TAATTGATCT CAAACGTTTA AAACTTGACC AACTTGAGAG AGAAGAATGC 
    ATGAAAGAAA TCACTGAAGC TGCTAGAAAA TGGGGTTTTT TCCAAGTTGT GAATCATGGA 
    GTTTCACAAG AGGTGCTAAA GAACATGCAG TTTGAAGAAA AGGAAGTGTT CCGAACACCT 
    TTTGGAATTA AATCACAAGA GAATTTTTTG AACTTGCCTT CTAGAACTTA TAGGTGGGGC 
    AACGCTTCTG CCATTAATCC AAAACAACTT ATGTGGTCAG AAGCATTACA CATATTTCTT 
    CCTGATATAG AAAAAATGGA CCAACACAAA AGTTTGAGAT CAAGTATTGA ATCTTTTGTA 
    AAAGTAGTTA CCCCTCTGGC AGAGAACTTG GTGCAAATTC TAGCTCAAGA GCTGAACATA 
    AACTTCAGCT ATTTCCAACA GAATTGTTCA GCAAATACTA GTTATCTTCG CTTGAATAGA 
    TATCCACCAT GTCCATTTCC TTCAAAGGTG ATTGGCCTTT TACCTCATGC TGATACTAGT 
    TTCATTACTA TAGTTCATCA AGATCATATT GGGGGATTGC AATTAATGAA AGATGGAAAG 
    TGGATTAGTG TCAAACCTAA TTCTGAAGCT CTCATTGTTA ATGTTGGAGA TTTATTCCAG 
    GCACTAAGCA ATGGACTGTA CACGAGTGTT GGACATCGAG TGGTAGCTGC TGAGAAAGTG 
    GAGAGGTTTT CTTTGGCATA TTTCTATGGC CCTTCCATTG ATGCTGTGAT AGAGAGCTAT 
    GCCACGCCGC CACTTTATAG AAAATTTACA TTTGGAGAGT ACAAAGAGCA AACAATGAAA 
    GATCTTAAGG AAGGTGGTGA TAAAGTGGGG ATATCTAGGT TTCTCTTATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003596636.2
    CDS1..951
    Translation

    Target ORF information:

    RefSeq Version XM_003596588.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula gibberellin 2-beta-dioxygenase 8 (LOC11416613), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 XM_003596588.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGAGCCTTT TGCAAGGCAC CAATGATCTT ATTAGTGACC TAAGTGATGT AGAGAAGCGT 
    GAGATACCTC TAATTGATCT CAAACGTTTA AAACTTGACC AACTTGAGAG AGAAGAATGC 
    ATGAAAGAAA TCACTGAAGC TGCTAGAAAA TGGGGTTTTT TCCAAGTTGT GAATCATGGA 
    GTTTCACAAG AGGTGCTAAA GAACATGCAG TTTGAAGAAA AGGAAGTGTT CCGAACACCT 
    TTTGGAATTA AATCACAAGA GAATTTTTTG AACTTGCCTT CTAGAACTTA TAGGTGGGGC 
    AACGCTTCTG CCATTAATCC AAAACAACTT ATGTGGTCAG AAGCATTACA CATATTTCTT 
    CCTGATATAG AAAAAATGGA CCAACACAAA AGTTTGAGAT CAAGTATTGA ATCTTTTGTA 
    AAAGTAGTTA CCCCTCTGGC AGAGAACTTG GTGCAAATTC TAGCTCAAGA GCTGAACATA 
    AACTTCAGCT ATTTCCAACA GAATTGTTCA GCAAATACTA GTTATCTTCG CTTGAATAGA 
    TATCCACCAT GTCCATTTCC TTCAAAGGTG ATTGGCCTTT TACCTCATGC TGATACTAGT 
    TTCATTACTA TAGTTCATCA AGATCATATT GGGGGATTGC AATTAATGAA AGATGGAAAG 
    TGGATTAGTG TCAAACCTAA TTCTGAAGCT CTCATTGTTA ATGTTGGAGA TTTATTCCAG 
    GCACTAAGCA ATGGACTGTA CACGAGTGTT GGACATCGAG TGGTAGCTGC TGAGAAAGTG 
    GAGAGGTTTT CTTTGGCATA TTTCTATGGC CCTTCCATTG ATGCTGTGAT AGAGAGCTAT 
    GCCACGCCGC CACTTTATAG AAAATTTACA TTTGGAGAGT ACAAAGAGCA AACAATGAAA 
    GATCTTAAGG AAGGTGGTGA TAAAGTGGGG ATATCTAGGT TTCTCTTATA G

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA


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