LOC11411972 cDNA ORF clone, Medicago truncatula(barrel medic)

The following LOC11411972 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC11411972 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OMe184100 XM_003615649.1
Latest version!
Medicago truncatula mannose-binding lectin superfamily protein partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00
OMe265185 XM_003615649.2
Latest version!
Medicago truncatula jacalin-related lectin 3 (LOC11411972), transcript variant X1, mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $307.30
$439.00
OMe265186 XM_024784102.1
Latest version!
Medicago truncatula jacalin-related lectin 3 (LOC11411972), transcript variant X2, mRNA. pcDNA3.1-C-(k)DYK or customized vector 19-21 $643.30
$919.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone 30% OFF
2-4 Clone 40% OFF
5 or more Clone 50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    CloneID OMe184100
    Clone ID Related Accession (Same CDS sequence) XM_003615649.1
    Accession Version XM_003615649.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1815bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2015-08-24
    Organism Medicago truncatula(barrel medic)
    Product mannose-binding lectin superfamily protein
    Comment Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_016411). ##Genome-Annotation-Data-START## Annotation Provider :: JCVI Annotation Version :: Mt4.0v2 Annotation Pipeline :: JCVI Eukaryotic Genome Annotation Pipeline Annotation Method :: EVidenceModeler (EVM), PASA Features Annotated :: Gene; mRNA; CDS; tRNA URL :: http://www.jcvi.org/medicago ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on the 5' end.

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGATGTTTT GCATGCAGAG TTCTGTGGAT TCCATAAAGA AACCTGCATC TGTTGGGCCA 
    TGGGGCGGCA ATGGAGGGTC CCGTTGGGAT GATGGAATAT ACTCTGGAGT AAGGCAGTTG
    GTGGTAGTTC ACGGAACTGG AATTGACTCC ATCCAGATTG AATATGATAA GAAAGGAAGC
    TCTATTTGGT CAGAGAAACA TGGTGGAACT GGAGGAAATA AAACTGACAA GGTTAAACTT
    GATTATCCAG ATGAGTTCTT AACTTCAGTT CACGGATACT ATGGTAGCTT GAACCAATGG
    GGCCACAACT TGGTTCGGTC ACTGAGTTTT GAGAGTAACA AGAAAACTTA TGGACCATTT
    GGTGTCGAGC AAGGCACATA TTTTTCAGTA CCAATGACTG GGGCCAAGAT TGTTGGGTTC
    CATGGCAGGT GTGGTTGGTA CCTAGATGCC ATTGGAGTAT ATATGAAGTC CTTGAAGCAA
    CCAAATCCAG CGAAAGCCTT GCATCATTCT GATCACGTTA ATAACACTAG TGAGAATTTT
    GGCTATTCAG TGATACAAGG AACTGTGAAC CAGAATTATG ATATTGTTCT TGCCGTAAGA
    CAGAAAGATC ATAAAGATGA TTTCGGTAAG CCTATACCAA ACAAGATGCC AGGGAAGATT
    TCTACTATCA AAGAATCTAA AAACATTGAA CACAAAGAAA AGATAACTCA TTCAGAAATT
    CCACCCGCAA AGGTTGGTGG TGTAGTTACA TGCGGTCCTT GGGGTGGCGT TGGCGGATAT
    GCATTTGACG ATGGGACCTA TAAAGGAATC AGGCAAATCA ATTTATCGCG CAATGTTGGA
    ATTGTATGGA TTAGAGTTAT GTATGATCAT GATGGGGATG CCATATGGGG ATGCAAACAA
    GGTGGGACAG GAGGATATAA AAGTGATAAG ATAGTCTTTG ATTTCCCATA TGAAGTCTTG
    ACATATATAT CGGGATACCA TGGACCTTTG ATGTACATGG GACCTGCTGT TATAAGATCA
    CTAACTTTCC ACACCACAAA AAGGAAGTAT GGACCATTTG GGGAAGAACA AGGAACTTAT
    TTCACCACAA AGGTGAAAGA AGGTAAAATC GTCGGCATTC ATGGGAGAAA AGGTTTGTTT
    CTCGATGCTT TTGGTGTACA TGTGCTTGAA GGAAAAGTGG TTGTGCCGGT GGCAATGCCT
    CCGAAGGAAA TCATCCCTAG AGAAACAAAT ATTGGTGAAA TAGGCGGTAC TCAATGGCCT
    AACAAACTGG TGCTTGCTAA GCCAACAGCA GCTGAAGAGG TTTCTTGTGG TGTGGTCAAA
    GAACCAGCTC CATGTGGCCC AGGCCCTTGG GGTGGGGATG GAGGTAGACC TTGGGATGAT
    GGAGTCTTTT CTGCGATTAA GCAGATTTAT TTGACAAAAG TATCAGATGG CATCTGCTCT
    ATCCAAATTG AGTATGATCG AAACAGGCAA TCTGTGTGGT CTATAAAACA CGGCGGTAAT
    GGAGGAGACA CCATGCATAG GATACAACTG GAGTTTCCAC ATGAGGTATT GACTTGTATA
    TCTGGCTATT ATGGGTCAAT CACAAAGGAT GAGAAGCATA CAGTCATAAA ATCACTGACA
    TTCCACACCA GCCGCGGTCA GTATGGTCCA TATGGTGAGG AAGTAGGGAA ATTCTTCACC
    TCAACCACTA CAGAGGGAAA GGTGGTGGGT TTCCATGGGA GGAGTAGCTT GTACTTGGAT
    GCTATTGGGA TCCACATGCA ACACTGGCTT GGAAGTCAGA AAACTTCAAG GTCCTCCCTT
    TTCAAGCTAT TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003615697.1
    CDS1..1815
    Translation

    Target ORF information:

    RefSeq Version XM_003615649.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula mannose-binding lectin superfamily protein partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_003615649.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    ATGATGTTTT GCATGCAGAG TTCTGTGGAT TCCATAAAGA AACCTGCATC TGTTGGGCCA 
    TGGGGCGGCA ATGGAGGGTC CCGTTGGGAT GATGGAATAT ACTCTGGAGT AAGGCAGTTG
    GTGGTAGTTC ACGGAACTGG AATTGACTCC ATCCAGATTG AATATGATAA GAAAGGAAGC
    TCTATTTGGT CAGAGAAACA TGGTGGAACT GGAGGAAATA AAACTGACAA GGTTAAACTT
    GATTATCCAG ATGAGTTCTT AACTTCAGTT CACGGATACT ATGGTAGCTT GAACCAATGG
    GGCCACAACT TGGTTCGGTC ACTGAGTTTT GAGAGTAACA AGAAAACTTA TGGACCATTT
    GGTGTCGAGC AAGGCACATA TTTTTCAGTA CCAATGACTG GGGCCAAGAT TGTTGGGTTC
    CATGGCAGGT GTGGTTGGTA CCTAGATGCC ATTGGAGTAT ATATGAAGTC CTTGAAGCAA
    CCAAATCCAG CGAAAGCCTT GCATCATTCT GATCACGTTA ATAACACTAG TGAGAATTTT
    GGCTATTCAG TGATACAAGG AACTGTGAAC CAGAATTATG ATATTGTTCT TGCCGTAAGA
    CAGAAAGATC ATAAAGATGA TTTCGGTAAG CCTATACCAA ACAAGATGCC AGGGAAGATT
    TCTACTATCA AAGAATCTAA AAACATTGAA CACAAAGAAA AGATAACTCA TTCAGAAATT
    CCACCCGCAA AGGTTGGTGG TGTAGTTACA TGCGGTCCTT GGGGTGGCGT TGGCGGATAT
    GCATTTGACG ATGGGACCTA TAAAGGAATC AGGCAAATCA ATTTATCGCG CAATGTTGGA
    ATTGTATGGA TTAGAGTTAT GTATGATCAT GATGGGGATG CCATATGGGG ATGCAAACAA
    GGTGGGACAG GAGGATATAA AAGTGATAAG ATAGTCTTTG ATTTCCCATA TGAAGTCTTG
    ACATATATAT CGGGATACCA TGGACCTTTG ATGTACATGG GACCTGCTGT TATAAGATCA
    CTAACTTTCC ACACCACAAA AAGGAAGTAT GGACCATTTG GGGAAGAACA AGGAACTTAT
    TTCACCACAA AGGTGAAAGA AGGTAAAATC GTCGGCATTC ATGGGAGAAA AGGTTTGTTT
    CTCGATGCTT TTGGTGTACA TGTGCTTGAA GGAAAAGTGG TTGTGCCGGT GGCAATGCCT
    CCGAAGGAAA TCATCCCTAG AGAAACAAAT ATTGGTGAAA TAGGCGGTAC TCAATGGCCT
    AACAAACTGG TGCTTGCTAA GCCAACAGCA GCTGAAGAGG TTTCTTGTGG TGTGGTCAAA
    GAACCAGCTC CATGTGGCCC AGGCCCTTGG GGTGGGGATG GAGGTAGACC TTGGGATGAT
    GGAGTCTTTT CTGCGATTAA GCAGATTTAT TTGACAAAAG TATCAGATGG CATCTGCTCT
    ATCCAAATTG AGTATGATCG AAACAGGCAA TCTGTGTGGT CTATAAAACA CGGCGGTAAT
    GGAGGAGACA CCATGCATAG GATACAACTG GAGTTTCCAC ATGAGGTATT GACTTGTATA
    TCTGGCTATT ATGGGTCAAT CACAAAGGAT GAGAAGCATA CAGTCATAAA ATCACTGACA
    TTCCACACCA GCCGCGGTCA GTATGGTCCA TATGGTGAGG AAGTAGGGAA ATTCTTCACC
    TCAACCACTA CAGAGGGAAA GGTGGTGGGT TTCCATGGGA GGAGTAGCTT GTACTTGGAT
    GCTATTGGGA TCCACATGCA ACACTGGCTT GGAAGTCAGA AAACTTCAAG GTCCTCCCTT
    TTCAAGCTAT TTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMe265185
    Clone ID Related Accession (Same CDS sequence) XM_003615649.2
    Accession Version XM_003615649.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1800bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product jacalin-related lectin 3 isoform X1
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016411.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Apr 23, 2018 this sequence version replaced XM_003615649.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTCTG TGGATTCCAT AAAGAAACCT GCATCTGTTG GGCCATGGGG CGGCAATGGA 
    GGGTCCCGTT GGGATGATGG AATATACTCT GGAGTAAGGC AGTTGGTGGT AGTTCACGGA
    ACTGGAATTG ACTCCATCCA GATTGAATAT GATAAGAAAG GAAGCTCTAT TTGGTCAGAG
    AAACATGGTG GAACTGGAGG AAATAAAACT GACAAGGTTA AACTTGATTA TCCAGATGAG
    TTCTTAACTT CAGTTCACGG ATACTATGGT AGCTTGAACC AATGGGGCCA CAACTTGGTT
    CGGTCACTGA GTTTTGAGAG TAACAAGAAA ACTTATGGAC CATTTGGTGT CGAGCAAGGC
    ACATATTTTT CAGTACCAAT GACTGGGGCC AAGATTGTTG GGTTCCATGG CAGGTGTGGT
    TGGTACCTAG ATGCCATTGG AGTATATATG AAGTCCTTGA AGCAACCAAA TCCAGCGAAA
    GCCTTGCATC ATTCTGATCA CGTTAATAAC ACTAGTGAGA ATTTTGGCTA TTCAGTGATA
    CAAGGAACTG TGAACCAGAA TTATGATATT GTTCTTGCCG TAAGACAGAA AGATCATAAA
    GATGATTTCG GTAAGCCTAT ACCAAACAAG ATGCCAGGGA AGATTTCTAC TATCAAAGAA
    TCTAAAAACA TTGAACACAA AGAAAAGATA ACTCATTCAG AAATTCCACC CGCAAAGGTT
    GGTGGTGTAG TTACATGCGG TCCTTGGGGT GGCGTTGGCG GATATGCATT TGACGATGGG
    ACCTATAAAG GAATCAGGCA AATCAATTTA TCGCGCAATG TTGGAATTGT ATGGATTAGA
    GTTATGTATG ATCATGATGG GGATGCCATA TGGGGATGCA AACAAGGTGG GACAGGAGGA
    TATAAAAGTG ATAAGATAGT CTTTGATTTC CCATATGAAG TCTTGACATA TATATCGGGA
    TACCATGGAC CTTTGATGTA CATGGGACCT GCTGTTATAA GATCACTAAC TTTCCACACC
    ACAAAAAGGA AGTATGGACC ATTTGGGGAA GAACAAGGAA CTTATTTCAC CACAAAGGTG
    AAAGAAGGTA AAATCGTCGG CATTCATGGG AGAAAAGGTT TGTTTCTCGA TGCTTTTGGT
    GTACATGTGC TTGAAGGAAA AGTGGTTGTG CCGGTGGCAA TGCCTCCGAA GGAAATCATC
    CCTAGAGAAA CAAATATTGG TGAAATAGGC GGTACTCAAT GGCCTAACAA ACTGGTGCTT
    GCTAAGCCAA CAGCAGCTGA AGAGGTTTCT TGTGGTGTGG TCAAAGAACC AGCTCCATGT
    GGCCCAGGCC CTTGGGGTGG GGATGGAGGT AGACCTTGGG ATGATGGAGT CTTTTCTGCG
    ATTAAGCAGA TTTATTTGAC AAAAGTATCA GATGGCATCT GCTCTATCCA AATTGAGTAT
    GATCGAAACA GGCAATCTGT GTGGTCTATA AAACACGGCG GTAATGGAGG AGACACCATG
    CATAGGATAC AACTGGAGTT TCCACATGAG GTATTGACTT GTATATCTGG CTATTATGGG
    TCAATCACAA AGGATGAGAA GCATACAGTC ATAAAATCAC TGACATTCCA CACCAGCCGC
    GGTCAGTATG GTCCATATGG TGAGGAAGTA GGGAAATTCT TCACCTCAAC CACTACAGAG
    GGAAAGGTGG TGGGTTTCCA TGGGAGGAGT AGCTTGTACT TGGATGCTAT TGGGATCCAC
    ATGCAACACT GGCTTGGAAG TCAGAAAACT TCAAGGTCCT CCCTTTTCAA GCTATTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_003615697.2
    CDS157..1956
    Translation

    Target ORF information:

    RefSeq Version XM_003615649.2
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula jacalin-related lectin 3 (LOC11411972), transcript variant X1, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_003615649.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    ATGAGTTCTG TGGATTCCAT AAAGAAACCT GCATCTGTTG GGCCATGGGG CGGCAATGGA 
    GGGTCCCGTT GGGATGATGG AATATACTCT GGAGTAAGGC AGTTGGTGGT AGTTCACGGA
    ACTGGAATTG ACTCCATCCA GATTGAATAT GATAAGAAAG GAAGCTCTAT TTGGTCAGAG
    AAACATGGTG GAACTGGAGG AAATAAAACT GACAAGGTTA AACTTGATTA TCCAGATGAG
    TTCTTAACTT CAGTTCACGG ATACTATGGT AGCTTGAACC AATGGGGCCA CAACTTGGTT
    CGGTCACTGA GTTTTGAGAG TAACAAGAAA ACTTATGGAC CATTTGGTGT CGAGCAAGGC
    ACATATTTTT CAGTACCAAT GACTGGGGCC AAGATTGTTG GGTTCCATGG CAGGTGTGGT
    TGGTACCTAG ATGCCATTGG AGTATATATG AAGTCCTTGA AGCAACCAAA TCCAGCGAAA
    GCCTTGCATC ATTCTGATCA CGTTAATAAC ACTAGTGAGA ATTTTGGCTA TTCAGTGATA
    CAAGGAACTG TGAACCAGAA TTATGATATT GTTCTTGCCG TAAGACAGAA AGATCATAAA
    GATGATTTCG GTAAGCCTAT ACCAAACAAG ATGCCAGGGA AGATTTCTAC TATCAAAGAA
    TCTAAAAACA TTGAACACAA AGAAAAGATA ACTCATTCAG AAATTCCACC CGCAAAGGTT
    GGTGGTGTAG TTACATGCGG TCCTTGGGGT GGCGTTGGCG GATATGCATT TGACGATGGG
    ACCTATAAAG GAATCAGGCA AATCAATTTA TCGCGCAATG TTGGAATTGT ATGGATTAGA
    GTTATGTATG ATCATGATGG GGATGCCATA TGGGGATGCA AACAAGGTGG GACAGGAGGA
    TATAAAAGTG ATAAGATAGT CTTTGATTTC CCATATGAAG TCTTGACATA TATATCGGGA
    TACCATGGAC CTTTGATGTA CATGGGACCT GCTGTTATAA GATCACTAAC TTTCCACACC
    ACAAAAAGGA AGTATGGACC ATTTGGGGAA GAACAAGGAA CTTATTTCAC CACAAAGGTG
    AAAGAAGGTA AAATCGTCGG CATTCATGGG AGAAAAGGTT TGTTTCTCGA TGCTTTTGGT
    GTACATGTGC TTGAAGGAAA AGTGGTTGTG CCGGTGGCAA TGCCTCCGAA GGAAATCATC
    CCTAGAGAAA CAAATATTGG TGAAATAGGC GGTACTCAAT GGCCTAACAA ACTGGTGCTT
    GCTAAGCCAA CAGCAGCTGA AGAGGTTTCT TGTGGTGTGG TCAAAGAACC AGCTCCATGT
    GGCCCAGGCC CTTGGGGTGG GGATGGAGGT AGACCTTGGG ATGATGGAGT CTTTTCTGCG
    ATTAAGCAGA TTTATTTGAC AAAAGTATCA GATGGCATCT GCTCTATCCA AATTGAGTAT
    GATCGAAACA GGCAATCTGT GTGGTCTATA AAACACGGCG GTAATGGAGG AGACACCATG
    CATAGGATAC AACTGGAGTT TCCACATGAG GTATTGACTT GTATATCTGG CTATTATGGG
    TCAATCACAA AGGATGAGAA GCATACAGTC ATAAAATCAC TGACATTCCA CACCAGCCGC
    GGTCAGTATG GTCCATATGG TGAGGAAGTA GGGAAATTCT TCACCTCAAC CACTACAGAG
    GGAAAGGTGG TGGGTTTCCA TGGGAGGAGT AGCTTGTACT TGGATGCTAT TGGGATCCAC
    ATGCAACACT GGCTTGGAAG TCAGAAAACT TCAAGGTCCT CCCTTTTCAA GCTATTTTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    CloneID OMe265186
    Clone ID Related Accession (Same CDS sequence) XM_024784102.1
    Accession Version XM_024784102.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 3702bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2018-04-22
    Organism Medicago truncatula(barrel medic)
    Product pentatricopeptide repeat-containing protein At1g19720 isoform X2
    Comment Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_016411.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END##

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    ATGGAAAAAA TTCATATTTT CATACCCAAT AAATCAATAA CTCCATTATC ATTCCCCAAT 
    AAACCCACCA AATTTGATTG CATTTCTTCA AAAAGGGTCA ATGCAAATTC CAACAATGTC
    TCAACAACCA AACCTTCAAT TCGAAAATTA ATTGATTCCC AATTGAACCA ATTATGCATT
    AATGGCTCCC TTAGTGAAGC TGTGACAATT CTTGATTCCC TTGCTGAGCA AGGGTGTAGG
    GTGAAACCCA TTACTTATAT GAATTTGTTA CAGTCATGCA TTGATAAAGA TTGTATTTTT
    ATTGGTAAGG AATTGCATTC TAGAATTGGG TTGGTTGAAA ATGTGAACCC TTTTGTGGAG
    ACTAAGTTGG TTAGTATGTA TGCGAAATGT GGGTTGTTGG GTATGGCGCG GAAGGTGTTT
    AATGAAATGT CTGTGAGGAA TTTGTTTACT TGGTCTGCTA TGATTGGTGG TTGTTCGAGG
    AATAAGAGTT GGGGGGAGGT TGTGGGTTTG TTTTATGCAA TGATGAGGGA TGGTGTTTTG
    CCGGATGAGT TTTTGCTTCC GAAGGTTTTG CAGGCGTGTG GGAAGTGTAG GGATTTGGAG
    ACTGGGAGGT TGATACATTC GATGGTGATT AGACGTGGAA TGCGGTGGTC GAAGCATTTG
    CGTAATTCGA TTATGGCTGT GTATGCTAAG TGTGGGGAGA TGGATTGTGC GAAGAAGATT
    TTTGATTGTA TGGATGAGAG GGATAGTGTT GCGTGGAATG CGATGATATC TGGGTTTTGT
    CAGAATGGTG AGATTGGACA AGCTCAGAAG TATTTTGATG CTATGCAGAA AGATGGAGTT
    GAACCTAGTT TGGTAACTTG GAATATTTTG ATTTCTTGTT ATAATCAGTT AGGGCATTGT
    GATCTTGCAA TTGATTTAAT GAGAAAGATG GAGTGGTTTG GTATTGCTCC AGATGTATAT
    ACTTGGACTT CGATGATTTC TGGATTTACT CAAAAGGGTA GGATAAGTCA TGCTTTAGAT
    TTGTTGAAAG AGATGTTTTT AGCTGGTGTT GAGGCCAATA ACATTACAAT TGCAAGTGCT
    GCCTCAGCAT GTGCAGCCTT AAAATCATTG AGTATGGGAT TAGAAATACA TTCTATTGCT
    GTTAAGATGA ATTTGGTCGA CAATGTATTA GTTGGTAATT CACTGATTGA CATGTATTGC
    AAGTGTGGTG ATCTTAAAGC TGCTCAACAC ATTTTTGATA TGATGTCAGA GAGAGATGTA
    TATTCTTGGA ACTCAATTAT TGGAGGGTAT TTCCAAGCTG GTTTCTGTGG CAAAGCTCAT
    GAATTATTTA TGAAAATGCA GGAGTCTGAT TCACCACCCA ATATTATTAC ATGGAATATA
    ATGATCACAG GATATATGCA GAGTGGTGCC GAGGATCAGG CGTTGGATCT TTTTAAAAGC
    ATTGAGAAAG ATGGGAAAAC TAAGCGAAAT GCAGCTTCTT GGAATTCTCT GATATCTGGT
    TTCGTACAAA GTGGACAAAA GGACAAGGCT TTACAGATAT TCCGGAACAT GCAGTTTTGC
    CACATACTTC CCAACTCGGT CACAATACTA AGTATCCTTC CGGTCTGTGC AAATTTAGTG
    GCTAGCAAGA AAGTGAAAGA AATCCATTGT TTTGCAGTCC GTAGAATTTT AGTGTCTGAA
    CTTTCCGTAT CAAATTTATT AATCGATAGT TATGCCAAGT CAGGAAATTT AATGTACTCG
    AAAAATATTT TTAATGAATT GTCATGGAAA GATGCTGTCA GTTGGAACTC TATGCTTTCA
    AGTTATGTTT TACATGGCTG TTCAGAGTCT GCACTTGATC TTTTTTATCA AATGAGGAAG
    CAAGGGCTTC AACCAAATAG AGGTACTTTC GCAAGTATTC TCTTAGCTTA TGGTCATGCT
    GGAATGAAAC CTGCATCTGT TGGGCCATGG GGCGGCAATG GAGGGTCCCG TTGGGATGAT
    GGAATATACT CTGGAGTAAG GCAGTTGGTG GTAGTTCACG GAACTGGAAT TGACTCCATC
    CAGATTGAAT ATGATAAGAA AGGAAGCTCT ATTTGGTCAG AGAAACATGG TGGAACTGGA
    GGAAATAAAA CTGACAAGGT TAAACTTGAT TATCCAGATG AGTTCTTAAC TTCAGTTCAC
    GGATACTATG GTAGCTTGAA CCAATGGGGC CACAACTTGG TTCGGTCACT GAGTTTTGAG
    AGTAACAAGA AAACTTATGG ACCATTTGGT GTCGAGCAAG GCACATATTT TTCAGTACCA
    ATGACTGGGG CCAAGATTGT TGGGTTCCAT GGCAGGTGTG GTTGGTACCT AGATGCCATT
    GGAGTATATA TGAAGTCCTT GAAGCAACCA AATCCAGCGA AAGCCTTGCA TCATTCTGAT
    CACGTTAATA ACACTAGTGA GAATTTTGGC TATTCAGTGA TACAAGGAAC TGTGAACCAG
    AATTATGATA TTGTTCTTGC CGTAAGACAG AAAGATCATA AAGATGATTT CGGTAAGCCT
    ATACCAAACA AGATGCCAGG GAAGATTTCT ACTATCAAAG AATCTAAAAA CATTGAACAC
    AAAGAAAAGA TAACTCATTC AGAAATTCCA CCCGCAAAGG TTGGTGGTGT AGTTACATGC
    GGTCCTTGGG GTGGCGTTGG CGGATATGCA TTTGACGATG GGACCTATAA AGGAATCAGG
    CAAATCAATT TATCGCGCAA TGTTGGAATT GTATGGATTA GAGTTATGTA TGATCATGAT
    GGGGATGCCA TATGGGGATG CAAACAAGGT GGGACAGGAG GATATAAAAG TGATAAGATA
    GTCTTTGATT TCCCATATGA AGTCTTGACA TATATATCGG GATACCATGG ACCTTTGATG
    TACATGGGAC CTGCTGTTAT AAGATCACTA ACTTTCCACA CCACAAAAAG GAAGTATGGA
    CCATTTGGGG AAGAACAAGG AACTTATTTC ACCACAAAGG TGAAAGAAGG TAAAATCGTC
    GGCATTCATG GGAGAAAAGG TTTGTTTCTC GATGCTTTTG GTGTACATGT GCTTGAAGGA
    AAAGTGGTTG TGCCGGTGGC AATGCCTCCG AAGGAAATCA TCCCTAGAGA AACAAATATT
    GGTGAAATAG GCGGTACTCA ATGGCCTAAC AAACTGGTGC TTGCTAAGCC AACAGCAGCT
    GAAGAGGTTT CTTGTGGTGT GGTCAAAGAA CCAGCTCCAT GTGGCCCAGG CCCTTGGGGT
    GGGGATGGAG GTAGACCTTG GGATGATGGA GTCTTTTCTG CGATTAAGCA GATTTATTTG
    ACAAAAGTAT CAGATGGCAT CTGCTCTATC CAAATTGAGT ATGATCGAAA CAGGCAATCT
    GTGTGGTCTA TAAAACACGG CGGTAATGGA GGAGACACCA TGCATAGGAT ACAACTGGAG
    TTTCCACATG AGGTATTGAC TTGTATATCT GGCTATTATG GGTCAATCAC AAAGGATGAG
    AAGCATACAG TCATAAAATC ACTGACATTC CACACCAGCC GCGGTCAGTA TGGTCCATAT
    GGTGAGGAAG TAGGGAAATT CTTCACCTCA ACCACTACAG AGGGAAAGGT GGTGGGTTTC
    CATGGGAGGA GTAGCTTGTA CTTGGATGCT ATTGGGATCC ACATGCAACA CTGGCTTGGA
    AGTCAGAAAA CTTCAAGGTC CTCCCTTTTC AAGCTATTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq XP_024639870.1
    CDS99..3800
    Translation

    Target ORF information:

    RefSeq Version XM_024784102.1
    Organism Medicago truncatula(barrel medic)
    Definition Medicago truncatula jacalin-related lectin 3 (LOC11411972), transcript variant X2, mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    XM_024784102.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    3121
    3181
    3241
    3301
    3361
    3421
    3481
    3541
    3601
    3661
    ATGGAAAAAA TTCATATTTT CATACCCAAT AAATCAATAA CTCCATTATC ATTCCCCAAT 
    AAACCCACCA AATTTGATTG CATTTCTTCA AAAAGGGTCA ATGCAAATTC CAACAATGTC
    TCAACAACCA AACCTTCAAT TCGAAAATTA ATTGATTCCC AATTGAACCA ATTATGCATT
    AATGGCTCCC TTAGTGAAGC TGTGACAATT CTTGATTCCC TTGCTGAGCA AGGGTGTAGG
    GTGAAACCCA TTACTTATAT GAATTTGTTA CAGTCATGCA TTGATAAAGA TTGTATTTTT
    ATTGGTAAGG AATTGCATTC TAGAATTGGG TTGGTTGAAA ATGTGAACCC TTTTGTGGAG
    ACTAAGTTGG TTAGTATGTA TGCGAAATGT GGGTTGTTGG GTATGGCGCG GAAGGTGTTT
    AATGAAATGT CTGTGAGGAA TTTGTTTACT TGGTCTGCTA TGATTGGTGG TTGTTCGAGG
    AATAAGAGTT GGGGGGAGGT TGTGGGTTTG TTTTATGCAA TGATGAGGGA TGGTGTTTTG
    CCGGATGAGT TTTTGCTTCC GAAGGTTTTG CAGGCGTGTG GGAAGTGTAG GGATTTGGAG
    ACTGGGAGGT TGATACATTC GATGGTGATT AGACGTGGAA TGCGGTGGTC GAAGCATTTG
    CGTAATTCGA TTATGGCTGT GTATGCTAAG TGTGGGGAGA TGGATTGTGC GAAGAAGATT
    TTTGATTGTA TGGATGAGAG GGATAGTGTT GCGTGGAATG CGATGATATC TGGGTTTTGT
    CAGAATGGTG AGATTGGACA AGCTCAGAAG TATTTTGATG CTATGCAGAA AGATGGAGTT
    GAACCTAGTT TGGTAACTTG GAATATTTTG ATTTCTTGTT ATAATCAGTT AGGGCATTGT
    GATCTTGCAA TTGATTTAAT GAGAAAGATG GAGTGGTTTG GTATTGCTCC AGATGTATAT
    ACTTGGACTT CGATGATTTC TGGATTTACT CAAAAGGGTA GGATAAGTCA TGCTTTAGAT
    TTGTTGAAAG AGATGTTTTT AGCTGGTGTT GAGGCCAATA ACATTACAAT TGCAAGTGCT
    GCCTCAGCAT GTGCAGCCTT AAAATCATTG AGTATGGGAT TAGAAATACA TTCTATTGCT
    GTTAAGATGA ATTTGGTCGA CAATGTATTA GTTGGTAATT CACTGATTGA CATGTATTGC
    AAGTGTGGTG ATCTTAAAGC TGCTCAACAC ATTTTTGATA TGATGTCAGA GAGAGATGTA
    TATTCTTGGA ACTCAATTAT TGGAGGGTAT TTCCAAGCTG GTTTCTGTGG CAAAGCTCAT
    GAATTATTTA TGAAAATGCA GGAGTCTGAT TCACCACCCA ATATTATTAC ATGGAATATA
    ATGATCACAG GATATATGCA GAGTGGTGCC GAGGATCAGG CGTTGGATCT TTTTAAAAGC
    ATTGAGAAAG ATGGGAAAAC TAAGCGAAAT GCAGCTTCTT GGAATTCTCT GATATCTGGT
    TTCGTACAAA GTGGACAAAA GGACAAGGCT TTACAGATAT TCCGGAACAT GCAGTTTTGC
    CACATACTTC CCAACTCGGT CACAATACTA AGTATCCTTC CGGTCTGTGC AAATTTAGTG
    GCTAGCAAGA AAGTGAAAGA AATCCATTGT TTTGCAGTCC GTAGAATTTT AGTGTCTGAA
    CTTTCCGTAT CAAATTTATT AATCGATAGT TATGCCAAGT CAGGAAATTT AATGTACTCG
    AAAAATATTT TTAATGAATT GTCATGGAAA GATGCTGTCA GTTGGAACTC TATGCTTTCA
    AGTTATGTTT TACATGGCTG TTCAGAGTCT GCACTTGATC TTTTTTATCA AATGAGGAAG
    CAAGGGCTTC AACCAAATAG AGGTACTTTC GCAAGTATTC TCTTAGCTTA TGGTCATGCT
    GGAATGAAAC CTGCATCTGT TGGGCCATGG GGCGGCAATG GAGGGTCCCG TTGGGATGAT
    GGAATATACT CTGGAGTAAG GCAGTTGGTG GTAGTTCACG GAACTGGAAT TGACTCCATC
    CAGATTGAAT ATGATAAGAA AGGAAGCTCT ATTTGGTCAG AGAAACATGG TGGAACTGGA
    GGAAATAAAA CTGACAAGGT TAAACTTGAT TATCCAGATG AGTTCTTAAC TTCAGTTCAC
    GGATACTATG GTAGCTTGAA CCAATGGGGC CACAACTTGG TTCGGTCACT GAGTTTTGAG
    AGTAACAAGA AAACTTATGG ACCATTTGGT GTCGAGCAAG GCACATATTT TTCAGTACCA
    ATGACTGGGG CCAAGATTGT TGGGTTCCAT GGCAGGTGTG GTTGGTACCT AGATGCCATT
    GGAGTATATA TGAAGTCCTT GAAGCAACCA AATCCAGCGA AAGCCTTGCA TCATTCTGAT
    CACGTTAATA ACACTAGTGA GAATTTTGGC TATTCAGTGA TACAAGGAAC TGTGAACCAG
    AATTATGATA TTGTTCTTGC CGTAAGACAG AAAGATCATA AAGATGATTT CGGTAAGCCT
    ATACCAAACA AGATGCCAGG GAAGATTTCT ACTATCAAAG AATCTAAAAA CATTGAACAC
    AAAGAAAAGA TAACTCATTC AGAAATTCCA CCCGCAAAGG TTGGTGGTGT AGTTACATGC
    GGTCCTTGGG GTGGCGTTGG CGGATATGCA TTTGACGATG GGACCTATAA AGGAATCAGG
    CAAATCAATT TATCGCGCAA TGTTGGAATT GTATGGATTA GAGTTATGTA TGATCATGAT
    GGGGATGCCA TATGGGGATG CAAACAAGGT GGGACAGGAG GATATAAAAG TGATAAGATA
    GTCTTTGATT TCCCATATGA AGTCTTGACA TATATATCGG GATACCATGG ACCTTTGATG
    TACATGGGAC CTGCTGTTAT AAGATCACTA ACTTTCCACA CCACAAAAAG GAAGTATGGA
    CCATTTGGGG AAGAACAAGG AACTTATTTC ACCACAAAGG TGAAAGAAGG TAAAATCGTC
    GGCATTCATG GGAGAAAAGG TTTGTTTCTC GATGCTTTTG GTGTACATGT GCTTGAAGGA
    AAAGTGGTTG TGCCGGTGGC AATGCCTCCG AAGGAAATCA TCCCTAGAGA AACAAATATT
    GGTGAAATAG GCGGTACTCA ATGGCCTAAC AAACTGGTGC TTGCTAAGCC AACAGCAGCT
    GAAGAGGTTT CTTGTGGTGT GGTCAAAGAA CCAGCTCCAT GTGGCCCAGG CCCTTGGGGT
    GGGGATGGAG GTAGACCTTG GGATGATGGA GTCTTTTCTG CGATTAAGCA GATTTATTTG
    ACAAAAGTAT CAGATGGCAT CTGCTCTATC CAAATTGAGT ATGATCGAAA CAGGCAATCT
    GTGTGGTCTA TAAAACACGG CGGTAATGGA GGAGACACCA TGCATAGGAT ACAACTGGAG
    TTTCCACATG AGGTATTGAC TTGTATATCT GGCTATTATG GGTCAATCAC AAAGGATGAG
    AAGCATACAG TCATAAAATC ACTGACATTC CACACCAGCC GCGGTCAGTA TGGTCCATAT
    GGTGAGGAAG TAGGGAAATT CTTCACCTCA ACCACTACAG AGGGAAAGGT GGTGGGTTTC
    CATGGGAGGA GTAGCTTGTA CTTGGATGCT ATTGGGATCC ACATGCAACA CTGGCTTGGA
    AGTCAGAAAA CTTCAAGGTC CTCCCTTTTC AAGCTATTTT GA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    An improved genome release (version Mt4.0) for the model legume Medicago truncatula.
    BMC genomics15312(2014 Apr)
    Tang H,Krishnakumar V,Bidwell S,Rosen B,Chan A,Zhou S,Gentzbittel L,Childs KL,Yandell M,Gundlach H,Mayer KF,Schwartz DC,Town CD


    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature480(7378)520-4(2011 Nov)
    Young ND,Debell? F,Oldroyd GE,Geurts R,Cannon SB,Udvardi MK,Benedito VA,Mayer KF,Gouzy J,Schoof H,Van de Peer Y,Proost S,Cook DR,Meyers BC,Spannagl M,Cheung F,De Mita S,Krishnakumar V,Gundlach H,Zhou S,Mudge J,Bharti AK,Murray JD,Naoumkina MA,Rosen B,Silverstein KA,Tang H,Rombauts S,Zhao PX,Zhou P,Barbe V,Bardou P,Bechner M,Bellec A,Berger A,Berg?s H,Bidwell S,Bisseling T,Choisne N,Couloux A,Denny R,Deshpande S,Dai X,Doyle JJ,Dudez AM,Farmer AD,Fouteau S,Franken C,Gibelin C,Gish J,Goldstein S,Gonz?lez AJ,Green PJ,Hallab A,Hartog M,Hua A,Humphray SJ,Jeong DH,Jing Y,J?cker A,Kenton SM,Kim DJ,Klee K,Lai H,Lang C,Lin S,Macmil SL,Magdelenat G,Matthews L,McCorrison J,Monaghan EL,Mun JH,Najar FZ,Nicholson C,Noirot C,O'Bleness M,Paule CR,Poulain J,Prion F,Qin B,Qu C,Retzel EF,Riddle C,Sallet E,Samain S,Samson N,Sanders I,Saurat O,Scarpelli C,Schiex T,Segurens B,Severin AJ,Sherrier DJ,Shi R,Sims S,Singer SR,Sinharoy S,Sterck L,Viollet A,Wang BB,Wang K,Wang M,Wang X,Warfsmann J,Weissenbach J,White DD,White JD,Wiley GB,Wincker P,Xing Y,Yang L,Yao Z,Ying F,Zhai J,Zhou L,Zuber A,D?nari? J,Dixon RA,May GD,Schwartz DC,Rogers J,Qu?tier F,Town CD,Roe BA