Gene Symbol | LOC106996676 |
Entrez Gene ID | 106996676 |
Full Name | HLA class I histocompatibility antigen, B-46 alpha chain-like |
Synonyms | Mamu-A1,Mamu-B,Mamu-B19 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
ORF » Species Summary » Macaca mulatta » LOC106996676 cDNA ORF clone
Gene Symbol | LOC106996676 |
Entrez Gene ID | 106996676 |
Full Name | HLA class I histocompatibility antigen, B-46 alpha chain-like |
Synonyms | Mamu-A1,Mamu-B,Mamu-B19 |
Gene Type | protein-coding |
Organism | Macaca mulatta(Rhesus monkey) |
mRNA | Protein | Name |
---|---|---|
XM_015129697.1 | XP_014985183.1 | HLA class I histocompatibility antigen, B-46 alpha chain-like |
NM_001318353.1 | NP_001305282.1 | HLA class I histocompatibility antigen, B-46 alpha chain-like precursor |
XM_028842625.1 | XP_028698458.1 | LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, B-46 alpha chain-like |
Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one.
Dudley DM, Karl JA, Creager HM, Bohn PS, Wiseman RW, O'Connor DH
Immunogenetics66(1)15-24(2014 Jan)
Mamu-B genes and their allelic repertoires in different populations of Chinese-origin rhesus macaques.
Liu Y, Li A, Wang X, Sui L, Li M, Zhao Y, Liu B, Zeng L, Sun Z
Immunogenetics65(4)273-80(2013 Apr)
Diversity of MHC class I genes in Burmese-origin rhesus macaques.
Naruse TK, Chen Z, Yanagida R, Yamashita T, Saito Y, Mori K, Akari H, Yasutomi Y, Miyazawa M, Matano T, Kimura A
Immunogenetics62(9)601-11(2010 Sep)
Major histocompatibility complex genotyping with massively parallel pyrosequencing.
Wiseman RW, Karl JA, Bimber BN, O'Leary CE, Lank SM, Tuscher JJ, Detmer AM, Bouffard P, Levenkova N, Turcotte CL, Szekeres E Jr, Wright C, Harkins T, O'Connor DH
Nature medicine15(11)1322-6(2009 Nov)
A snapshot of the Mamu-B genes and their allelic repertoire in rhesus macaques of Chinese origin.
Otting N, Heijmans CM, van der Wiel M, de Groot NG, Doxiadis GG, Bontrop RE
Immunogenetics60(9)507-14(2008 Sep)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC106996676 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC106996676 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OMb57541 | |
Clone ID Related Accession (Same CDS sequence) | NM_001318353.1 | |
Accession Version | NM_001318353.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1089bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-11-10 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HLA class I histocompatibility antigen, B-46 alpha chain-like precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from LN899713.1. ##Evidence-Data-START## Transcript exon combination :: LN899713.1 [ECO:0000332] ##Evidence-Data-END## |
1 | ATGCGGGTCA TGGCGCCCCG AACCCTCCTC CTGCTGCTCT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001305282.1 |
CDS | 1..1089 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001318353.1 |
1 | ATGCGGGTCA TGGCGCCCCG AACCCTCCTC CTGCTGCTCT CGGGGGCCCT GGCCCTGACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb57483 | |
Clone ID Related Accession (Same CDS sequence) | XM_015129697.1 | |
Accession Version | XM_015129697.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1179bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-12-20 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | HLA class I histocompatibility antigen, B-46 alpha chain-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_015074903.1) and transcript sequence (EF580171.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Macaca mulatta Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## assembly gap :: added 333 transcript bases to patch genome assembly gap ##RefSeq-Attributes-END## |
1 | ATGTCTAGAG AAGCCAATCA GCGTCGCCGC GGTCTCAGTT CTAAACTCCC CACGCGCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_014985183.1 |
CDS | 113..1291 |
Translation |
Target ORF information:
Target ORF information:
|
XM_015129697.1 |
1 | ATGTCTAGAG AAGCCAATCA GCGTCGCCGC GGTCTCAGTT CTAAACTCCC CACGCGCCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OMb57793 | |
Clone ID Related Accession (Same CDS sequence) | XM_028842625.1 | |
Accession Version | XM_028842625.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1122bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-25 | |
Organism | Macaca mulatta(Rhesus monkey) | |
Product | LOW QUALITY PROTEIN: HLA class I histocompatibility antigen, B-46 alpha chain-like | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_021160161.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## frameshifts :: corrected 1 indel ##RefSeq-Attributes-END## |
1 | ATGGCGCCGC GAACCCTCCT CCTGCTGCTC TCGGGGGCCC TGGCCCTGAC CGAGACCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_028698458.1 |
CDS | 66..1187 |
Translation |
Target ORF information:
Target ORF information:
|
XM_028842625.1 |
1 | ATGGCGCCGC GAACCCTCCT CCTGCTGCTC TCGGGGGCCC TGGCCCTGAC CGAGACCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Full-length novel MHC class I allele discovery by next-generation sequencing: two platforms are better than one. |
Mamu-B genes and their allelic repertoires in different populations of Chinese-origin rhesus macaques. |
Diversity of MHC class I genes in Burmese-origin rhesus macaques. |
Major histocompatibility complex genotyping with massively parallel pyrosequencing. |
A snapshot of the Mamu-B genes and their allelic repertoire in rhesus macaques of Chinese origin. |