CG12877 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG12877
Entrez Gene ID	43333
Full Name	CG12877 gene product from transcript CG12877-RC
Synonyms	BcDNA:LD30051,Dmel\CG12877
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 98B2-98B2

mRNA and Protein(s)

mRNA	Protein	Name
NM_001038984.3	NP_001034073.1	uncharacterized protein

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG12877	NP_733234.2
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP003847	XP_310405.7

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG12877 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG12877 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06358	NM_001038984.3 Latest version!	Drosophila melanogaster uncharacterized protein (CG12877), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

ORF Online Only Promotion

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG12877 ( NM_001038984.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001034073.1 Drosophila melanogaster uncharacterized protein (CG12877), mRNA.

Price & Availability↑

CloneID	OFa06358
Clone ID Related Accession (Same CDS sequence)	NM_001038984.3
Accession Version	NM_001038984.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2976bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_001038984.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTGCCAT CCACGGGTCT CTTTAAGGGC TTCTTGTGCC CTTACTTTGA CGGCCAGGAT 
GCGGCGTCCT GCAAGCGCCC CTTTTGCCAC TTTAAGCATG CTCGCAAAGA CGAATTGGAG 
GCCGCTCCAC CTGCAGAACC TTCCCCCGTG CCCAAGTACA AGCCGGCACC CAAGTTGCTC 
TCCCTTCCAC TGCCCCAGAT CACGCTATGT GCGCCCCGGA AGAAGTCCAA TCTGGAGTAC 
CACCCGGAGA AGCCGGCTCT TGACGCATCG CCGGCTAAGA AGAAGCAGGA GGCGTCCGTG 
GACAGTGCTC CCAAATATGT GCCCGGCCAG CCATCTGTTA CAAATGGCGA AGAATATGAC 
GATTGGCAGG CGGTACTCGA AAAGGAAATT GATGAGCAGA TGCAGGTGGA GATTGAGGAG 
CAAGTCCAGA ATAACGACGA AGAACAGAAG ATAGATACGG TAGCTGAAAA CGAGGAGGAC 
CAGGAGAATA CGCAACTGAC GGATGCTAGG GATAGCCACG AAAAGGATCG AAAGCCCAGC 
AAGGAGCGGG AAAGGGATAT AGAAAAGAAG AAGATCAGAG AGCTGAAAAG GGAAAAGATC 
AAAGACAGGG ATCGGGACCG GGACCGGGAC CGGGAAAAAG ACAAAGAGAA GAGCAAGGAA 
AGGGACAGAG AGAAGGAAAA AAATGATAGG GATAAGCGAA AGTCCTCCCA CAGCGACAAG 
GAGCGCTCCA AGGAGCGAAA TACTTCAAGC TCAAGTTCCT CTAAGCACAA GTCTTCATCT 
AGCTCCTCTT CCAGCAAAAA GTCATCCAGC AGCGATAAGC ACCGCGACGA CAAAAGTTCC 
AGTAGCAGGC ACAAGAGCAG TTCTTCATCA TCCTCCTCGA AGAGCCATCA TCACAAATCT 
AGTTCCTCGA GTTCACGGTC CAAAACTAAG AGGAGCTCGT CTTCCAGCAA AAGCGCTGGC 
ACTTCAAAGA GCGAACCGGA GGCGGATAAG GATACTGAAG CAGCTGTACT GACACCAGCA 
GAACCTATGG ATGATCTGGA TGACATGGAC TTTGATTTTG AAGCAGACAC CTCGGAAGGA 
GAAATTGTAC GCCAGTGTGA AATGATTTTT GACGAGATGG AAAAAAAATT TGCGCAGATG 
CACAAGGACG AAGGCGGCAA TGCCAACCCG GAGAGTTCTC GCAAGCGCAA AGCTCCTTCT 
CCGGACATTG ATACCTTCAC CGAGGCAGCC ACGGCGGCTC TGCAGAAGCG CCGGGTGGCC 
CACGAGAATG CTGACAAGAT CACGCCTCAT TTGGCTCCTT CGGCGGCGAT GCGCAAACCC 
AATCACGTCC GTAATGCCAT GCAGGCGATC TTCAACCGCC GCGCGGAGCT GCGGCGCCAG 
GAGAAGCTAC AAGCCGAAGC CTCAGCGGAG CAGGTACGTC AGGCACAGGA GCGGGTGCGC 
CAAGCGCAGG AGGAGCTCCG TCAGGCCAAG GTCAACTCCA ACCTCACGCC ACTTATTTCG 
CGAAGTGCTC TGACCCCACC AGTGCGATCA GCTCGCAGCA TAGCACCTGT GGCCAACATT 
GTGGCCATCG CTCGGGCCAA AAAAAAGATC GAGGAGCTGC AGGCCGAGAA GAAGCCAGCC 
TTTACGCCTG CACAATCATT CAAGGGCGCC GGCCGTGTGG CTCACAAGCC CACTGCTGCG 
CTAGACAAAG CGGCTCCTGT GTCCAACGCG GAGAAGCCAA CCGTCCTAGA TCCCAGCAGC 
TCCAAGATAT CATACAACGT GCGCATTCAG TATTATGAGA TGATGGTAAG GCACTGCACC 
GTCATCTATC CGCAGCTGGC AGATGCCTGG GAGCGCGCCC AGGTGGAGGA GTTGACCGTC 
TTTAAGAAGT GCAACACGCC TGCCATCTAC AAGAACAGCT GCATGCTGGC GATTAACAAG 
CTCCGCAAGG AGGCCTTAGA GGCGGGAAAC AAGCCGAGCG TAGCCTGCAA GACTGTGTCG 
CACGAGATGA TGCTGGGCGG CAAGCGGGCG CTCACCACAT CCTGGAGCGT AGAGAAAAAG 
GGAAAACTGA GCTCCTTGGG CAATGGCGAA CCTTTCGATG CTTTAGACGC CGAGAAAGCT 
TACAAAATGG TATTCGATCT TCGCCTGACT GAAGAGCAGC TGGTGGAGAA CGGATATCCG 
CGTCCGGGCG ATAAGCGCGG ATCCGCAGTG ATACGCGCCT GCCGCCCCAA CCGTCGTCCC 
AACCAGAAAG AGCGCTACTG TTCCCGCTGC GGCAAGGTAT TCAGCTTGGA CATATACGAG 
CACCAGAGCT TTGACATGTG CAACTACCAT CCGAAAAGCA CGGGATATCG ACGAGGATTC 
ACGGACCACC AGCATCGCTG CTGCCAGCAG CCGGCGGGCA CTCCAGGCTG CACCTATGCC 
AACTACCACG TCAGCGACTA TTACGATCCG GAAAAGCTCA CCTGTTTCGT GAAGACGATC 
GAACGGGGTG AGGAATTTGT GCCCACTAAG AAGGACATAT ATGCACTGGA TTGCGAGATG 
TGTTATACCA CACACGGAAT AGAGCTAACC CGCGTTACGG TGGTGGACAT AAATGGACGC 
AGCGTTTACG ATGCTCTTGT CAAGCCGGAC AACCAGATTG TGGACTACAA TACGACCTAC 
TCGGGCATCA CGGAGGCGAT GCTCTCCAAT GAGACGCGTA CCATACGCGA CGTTCAGGCG 
GTGCTGATGT CCATGTTCCA TGCCAAAACC GTGCTCGTTG GCCACAGTCT GGAGAGCGAT 
TTGAAGGCAC TCAAACTCAT TCACGACGTT GTGGTGGACA CATCGGTGCT GTTTCCCCAC 
AAGATGGGAC CGCCAAAGAA GCGAGCTCTG AAAACACTGT GCATTGAAAA CCTAAAGCGG 
ATTATACAGG AGAGCGAGGC TGGCCACGAC AGTGCCGAGG ATGCTGAGGT GTGCATTCAG 
CTCATCAAGT ATTATCTGCG CAACAAAATC AGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001034073.1
CDS	111..3086
Translation	MLPSTGLFKGFLCPYFDGQDAASCKRPFCHFKHARKDELEAAPPAEPSPVPKYKPAPKLLSLPLPQITLCAPRKKSNLEYHPEKPALDASPAKKKQEASVDSAPKYVPGQPSVTNGEEYDDWQAVLEKEIDEQMQVEIEEQVQNNDEEQKIDTVAENEEDQENTQLTDARDSHEKDRKPSKERERDIEKKKIRELKREKIKDRDRDRDRDREKDKEKSKERDREKEKNDRDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKKSSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPEADKDTEAAVLTPAEPMDDLDDMDFDFEADTSEGEIVRQCEMIFDEMEKKFAQMHKDEGGNANPESSRKRKAPSPDIDTFTEAATAALQKRRVAHENADKITPHLAPSAAMRKPNHVRNAMQAIFNRRAELRRQEKLQAEASAEQVRQAQERVRQAQEELRQAKVNSNLTPLISRSALTPPVRSARSIAPVANIVAIARAKKKIEELQAEKKPAFTPAQSFKGAGRVAHKPTAALDKAAPVSNAEKPTVLDPSSSKISYNVRIQYYEMMVRHCTVIYPQLADAWERAQVEELTVFKKCNTPAIYKNSCMLAINKLRKEALEAGNKPSVACKTVSHEMMLGGKRALTTSWSVEKKGKLSSLGNGEPFDALDAEKAYKMVFDLRLTEEQLVENGYPRPGDKRGSAVIRACRPNRRPNQKERYCSRCGKVFSLDIYEHQSFDMCNYHPKSTGYRRGFTDHQHRCCQQPAGTPGCTYANYHVSDYYDPEKLTCFVKTIERGEEFVPTKKDIYALDCEMCYTTHGIELTRVTVVDINGRSVYDALVKPDNQIVDYNTTYSGITEAMLSNETRTIRDVQAVLMSMFHAKTVLVGHSLESDLKALKLIHDVVVDTSVLFPHKMGPPKKRALKTLCIENLKRIIQESEAGHDSAEDAEVCIQLIKYYLRNKIS

Target ORF information:

RefSeq Version	NM_001038984.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG12877), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001038984.3

ORF Insert Sequence:

ATGCTGCCAT CCACGGGTCT CTTTAAGGGC TTCTTGTGCC CTTACTTTGA CGGCCAGGAT 
GCGGCGTCCT GCAAGCGCCC CTTTTGCCAC TTTAAGCATG CTCGCAAAGA CGAATTGGAG 
GCCGCTCCAC CTGCAGAACC TTCCCCCGTG CCCAAGTACA AGCCGGCACC CAAGTTGCTC 
TCCCTTCCAC TGCCCCAGAT CACGCTATGT GCGCCCCGGA AGAAGTCCAA TCTGGAGTAC 
CACCCGGAGA AGCCGGCTCT TGACGCATCG CCGGCTAAGA AGAAGCAGGA GGCGTCCGTG 
GACAGTGCTC CCAAATATGT GCCCGGCCAG CCATCTGTTA CAAATGGCGA AGAATATGAC 
GATTGGCAGG CGGTACTCGA AAAGGAAATT GATGAGCAGA TGCAGGTGGA GATTGAGGAG 
CAAGTCCAGA ATAACGACGA AGAACAGAAG ATAGATACGG TAGCTGAAAA CGAGGAGGAC 
CAGGAGAATA CGCAACTGAC GGATGCTAGG GATAGCCACG AAAAGGATCG AAAGCCCAGC 
AAGGAGCGGG AAAGGGATAT AGAAAAGAAG AAGATCAGAG AGCTGAAAAG GGAAAAGATC 
AAAGACAGGG ATCGGGACCG GGACCGGGAC CGGGAAAAAG ACAAAGAGAA GAGCAAGGAA 
AGGGACAGAG AGAAGGAAAA AAATGATAGG GATAAGCGAA AGTCCTCCCA CAGCGACAAG 
GAGCGCTCCA AGGAGCGAAA TACTTCAAGC TCAAGTTCCT CTAAGCACAA GTCTTCATCT 
AGCTCCTCTT CCAGCAAAAA GTCATCCAGC AGCGATAAGC ACCGCGACGA CAAAAGTTCC 
AGTAGCAGGC ACAAGAGCAG TTCTTCATCA TCCTCCTCGA AGAGCCATCA TCACAAATCT 
AGTTCCTCGA GTTCACGGTC CAAAACTAAG AGGAGCTCGT CTTCCAGCAA AAGCGCTGGC 
ACTTCAAAGA GCGAACCGGA GGCGGATAAG GATACTGAAG CAGCTGTACT GACACCAGCA 
GAACCTATGG ATGATCTGGA TGACATGGAC TTTGATTTTG AAGCAGACAC CTCGGAAGGA 
GAAATTGTAC GCCAGTGTGA AATGATTTTT GACGAGATGG AAAAAAAATT TGCGCAGATG 
CACAAGGACG AAGGCGGCAA TGCCAACCCG GAGAGTTCTC GCAAGCGCAA AGCTCCTTCT 
CCGGACATTG ATACCTTCAC CGAGGCAGCC ACGGCGGCTC TGCAGAAGCG CCGGGTGGCC 
CACGAGAATG CTGACAAGAT CACGCCTCAT TTGGCTCCTT CGGCGGCGAT GCGCAAACCC 
AATCACGTCC GTAATGCCAT GCAGGCGATC TTCAACCGCC GCGCGGAGCT GCGGCGCCAG 
GAGAAGCTAC AAGCCGAAGC CTCAGCGGAG CAGGTACGTC AGGCACAGGA GCGGGTGCGC 
CAAGCGCAGG AGGAGCTCCG TCAGGCCAAG GTCAACTCCA ACCTCACGCC ACTTATTTCG 
CGAAGTGCTC TGACCCCACC AGTGCGATCA GCTCGCAGCA TAGCACCTGT GGCCAACATT 
GTGGCCATCG CTCGGGCCAA AAAAAAGATC GAGGAGCTGC AGGCCGAGAA GAAGCCAGCC 
TTTACGCCTG CACAATCATT CAAGGGCGCC GGCCGTGTGG CTCACAAGCC CACTGCTGCG 
CTAGACAAAG CGGCTCCTGT GTCCAACGCG GAGAAGCCAA CCGTCCTAGA TCCCAGCAGC 
TCCAAGATAT CATACAACGT GCGCATTCAG TATTATGAGA TGATGGTAAG GCACTGCACC 
GTCATCTATC CGCAGCTGGC AGATGCCTGG GAGCGCGCCC AGGTGGAGGA GTTGACCGTC 
TTTAAGAAGT GCAACACGCC TGCCATCTAC AAGAACAGCT GCATGCTGGC GATTAACAAG 
CTCCGCAAGG AGGCCTTAGA GGCGGGAAAC AAGCCGAGCG TAGCCTGCAA GACTGTGTCG 
CACGAGATGA TGCTGGGCGG CAAGCGGGCG CTCACCACAT CCTGGAGCGT AGAGAAAAAG 
GGAAAACTGA GCTCCTTGGG CAATGGCGAA CCTTTCGATG CTTTAGACGC CGAGAAAGCT 
TACAAAATGG TATTCGATCT TCGCCTGACT GAAGAGCAGC TGGTGGAGAA CGGATATCCG 
CGTCCGGGCG ATAAGCGCGG ATCCGCAGTG ATACGCGCCT GCCGCCCCAA CCGTCGTCCC 
AACCAGAAAG AGCGCTACTG TTCCCGCTGC GGCAAGGTAT TCAGCTTGGA CATATACGAG 
CACCAGAGCT TTGACATGTG CAACTACCAT CCGAAAAGCA CGGGATATCG ACGAGGATTC 
ACGGACCACC AGCATCGCTG CTGCCAGCAG CCGGCGGGCA CTCCAGGCTG CACCTATGCC 
AACTACCACG TCAGCGACTA TTACGATCCG GAAAAGCTCA CCTGTTTCGT GAAGACGATC 
GAACGGGGTG AGGAATTTGT GCCCACTAAG AAGGACATAT ATGCACTGGA TTGCGAGATG 
TGTTATACCA CACACGGAAT AGAGCTAACC CGCGTTACGG TGGTGGACAT AAATGGACGC 
AGCGTTTACG ATGCTCTTGT CAAGCCGGAC AACCAGATTG TGGACTACAA TACGACCTAC 
TCGGGCATCA CGGAGGCGAT GCTCTCCAAT GAGACGCGTA CCATACGCGA CGTTCAGGCG 
GTGCTGATGT CCATGTTCCA TGCCAAAACC GTGCTCGTTG GCCACAGTCT GGAGAGCGAT 
TTGAAGGCAC TCAAACTCAT TCACGACGTT GTGGTGGACA CATCGGTGCT GTTTCCCCAC 
AAGATGGGAC CGCCAAAGAA GCGAGCTCTG AAAACACTGT GCATTGAAAA CCTAAAGCGG 
ATTATACAGG AGAGCGAGGC TGGCCACGAC AGTGCCGAGG ATGCTGAGGT GTGCATTCAG 
CTCATCAAGT ATTATCTGCG CAACAAAATC AGTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG12877 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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