CG6142 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	CG6142
Entrez Gene ID	43178
Full Name	CG6142 gene product from transcript CG6142-RA
Synonyms	Dmel\CG6142
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 97A1-97A1

mRNA and Protein(s)

mRNA	Protein	Name
NM_143209.2	NP_651466.1	uncharacterized protein

Pathways from BioSystems

Homologies

Drosophila melanogaster (fruit fly)	CG6142	NP_651466.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002551	XP_312388.4
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP002552	XP_312387.5

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following CG6142 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the CG6142 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa06192	NM_143209.2 Latest version!	Drosophila melanogaster uncharacterized protein (CG6142), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

CG6142 ( NM_143209.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_651466.1 Drosophila melanogaster uncharacterized protein (CG6142), mRNA.

Price & Availability↑

CloneID	OFa06192
Clone ID Related Accession (Same CDS sequence)	NM_143209.2
Accession Version	NM_143209.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1851bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	uncharacterized protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 31, 2011 this sequence version replaced NM_143209.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGAGATTCT GTGGAGTGCT GATTATCTGC CTGTGGTATA TTCAAGTCAC CTGGTCCCAA 
CTTCTTGTGG ATTTGGCTCG TGATTTCGAG ACTTCTTTTC TAAACAATAG GATCCCGGAC 
ACCACACGAT TCCTGCCGGA ATATGACTTC ATCATCGTGG GAGCAGGAAG TGCTGGATGT 
GTGATGGCCA ATCGGCTGAG CGAGATATCC TCGGCGAGTG TTCTGCTCCT GGAGGCCGGT 
GATCAGGAGA CATTCATCAG CGATGTTCCT CTGACAGCGG CTCTCACCCA AATGACTCGA 
TATAATTGGG GATACAAGGC GGAGCCAACG GAGCACGCCT GTCAAGGATT AAAGGGAGGC 
GTTTGCAACT GGCCCAAGGG GCGTGGCGTG GGTGGCACCA GTTTGATCAA CTTTATGTTA 
TATACACGCG GTCATCGAAG GGATTATGAT GAGTGGGCGG CGGCCAACAA CTCAGGTTGG 
TCCTACGATG AGTTGTTGCC ATACTTTCGA AAATCGGAGA GGATTGGAAT ACCGGAGCTG 
TATAAATCCC CGTATCATGG ACGCAATGGC CAGTTGGATG TGCAGTATAC GGACTACAGG 
TCACAACTCT TGAAGGCTTT TCTAAAATCA GGCAGGGAAA TGGGTTACGA AATTACCGAT 
CCAAATGGAG AGCACCTCAT GGGATTTGCA AGATCGCAGG CCACCATCCG AAATGGCAGG 
AGGTGCAGTA CGAGCAAGGC TTTTATACAG CCAGTTGTGA ATCGAAAGAA TCTTCATATC 
TCGATGAAAA GTTGGGTCAC CCGACTGATA ATTGATCCGA TCACTAAAAC TGCCACTGGA 
GTGGAGTTCG TTAAGCAACG TCAACGCTAC GTTGTGCGGG CCAGAAAAGA AGTGATCCTC 
TCCGCTGGCA CCATAGCCAG TCCCCAGCTT CTCATGTTAT CCGGGATCGG TCCAGCAGAG 
CATCTTAGGG AGCACAACAT AACAGTAATG CAGGATTTGC CAGTTGGTTA CAACTTACAG 
GATCACATAA CACTTAATGG TCTTGTGTTC GTGGTCAATG ATTCGACGGT AAACGATGCT 
CGACTGCTGA ATCCCTCGGA CATATTTAGG TACATCTTCG CAGGACAGGG ACCATATACA 
ATTCCAGGTG GAGCTGAAGC ATTCGCCTTT GTGCGGACTC CCAGTTCCAA ATTTGCAAAG 
GACTATCCTG ATATGGAACT GGTCCTAGGA GCCGGATCCT TAAGTGGAGA TCGCTTTGGC 
ACTATGCGAA ATTTGCTGGG CATCACCGAC GAGTTTTACG ACTACATGTT TGGAGATCTG 
CAGAGCAAGG AGACCTTTGG TCTGGTTCCA GTGCTCCTGC GACCCAAAAG TCGCGGCAGA 
ATATCGCTGC GCAGTCGCAA TCCCTTCCAC TGGCCCCGTA TGGAACCCAA TTTCATGCAG 
CACCCGGATG ATGTGAGGGC CATGATCGAG GGAATCGAAA TGATTCTAAA GCTTTCTAGA 
TCGAAGCCTA TGGCGAAGAT GGGTACTCGT TTCCATGACC GCCCATTTCC GGGTTGCGAG 
AACCTGAAAT TCGCCAGCGA GGCGTACTGG AAATGCTGCT TAAGAAGATA TGGCTCCAGC 
TTGCAGCATC AATCAGGCAC CTGCAAAATG GGTCCTGCAA CGGATAATAC TTCAGTGGTG 
GATGCCCAAC TGCGGATCCA CGGTATCCGT GGATTGCGGG TTGTTGATGC TTCTGTGTTA 
CCTAATGTCC CAGCTGGTCA CACCAATGCC ATTGTGATCA TGGTCGCCGA AAAGGCGGGG 
GATATGATTA AGGATGCTTG GCGCATGCCG ATCACTCCCT TGAGCTCATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_651466.1
CDS	121..1971
Translation	MRFCGVLIICLWYIQVTWSQLLVDLARDFETSFLNNRIPDTTRFLPEYDFIIVGAGSAGCVMANRLSEISSASVLLLEAGDQETFISDVPLTAALTQMTRYNWGYKAEPTEHACQGLKGGVCNWPKGRGVGGTSLINFMLYTRGHRRDYDEWAAANNSGWSYDELLPYFRKSERIGIPELYKSPYHGRNGQLDVQYTDYRSQLLKAFLKSGREMGYEITDPNGEHLMGFARSQATIRNGRRCSTSKAFIQPVVNRKNLHISMKSWVTRLIIDPITKTATGVEFVKQRQRYVVRARKEVILSAGTIASPQLLMLSGIGPAEHLREHNITVMQDLPVGYNLQDHITLNGLVFVVNDSTVNDARLLNPSDIFRYIFAGQGPYTIPGGAEAFAFVRTPSSKFAKDYPDMELVLGAGSLSGDRFGTMRNLLGITDEFYDYMFGDLQSKETFGLVPVLLRPKSRGRISLRSRNPFHWPRMEPNFMQHPDDVRAMIEGIEMILKLSRSKPMAKMGTRFHDRPFPGCENLKFASEAYWKCCLRRYGSSLQHQSGTCKMGPATDNTSVVDAQLRIHGIRGLRVVDASVLPNVPAGHTNAIVIMVAEKAGDMIKDAWRMPITPLSS

Target ORF information:

RefSeq Version	NM_143209.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster uncharacterized protein (CG6142), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_143209.2

ORF Insert Sequence:

ATGAGATTCT GTGGAGTGCT GATTATCTGC CTGTGGTATA TTCAAGTCAC CTGGTCCCAA 
CTTCTTGTGG ATTTGGCTCG TGATTTCGAG ACTTCTTTTC TAAACAATAG GATCCCGGAC 
ACCACACGAT TCCTGCCGGA ATATGACTTC ATCATCGTGG GAGCAGGAAG TGCTGGATGT 
GTGATGGCCA ATCGGCTGAG CGAGATATCC TCGGCGAGTG TTCTGCTCCT GGAGGCCGGT 
GATCAGGAGA CATTCATCAG CGATGTTCCT CTGACAGCGG CTCTCACCCA AATGACTCGA 
TATAATTGGG GATACAAGGC GGAGCCAACG GAGCACGCCT GTCAAGGATT AAAGGGAGGC 
GTTTGCAACT GGCCCAAGGG GCGTGGCGTG GGTGGCACCA GTTTGATCAA CTTTATGTTA 
TATACACGCG GTCATCGAAG GGATTATGAT GAGTGGGCGG CGGCCAACAA CTCAGGTTGG 
TCCTACGATG AGTTGTTGCC ATACTTTCGA AAATCGGAGA GGATTGGAAT ACCGGAGCTG 
TATAAATCCC CGTATCATGG ACGCAATGGC CAGTTGGATG TGCAGTATAC GGACTACAGG 
TCACAACTCT TGAAGGCTTT TCTAAAATCA GGCAGGGAAA TGGGTTACGA AATTACCGAT 
CCAAATGGAG AGCACCTCAT GGGATTTGCA AGATCGCAGG CCACCATCCG AAATGGCAGG 
AGGTGCAGTA CGAGCAAGGC TTTTATACAG CCAGTTGTGA ATCGAAAGAA TCTTCATATC 
TCGATGAAAA GTTGGGTCAC CCGACTGATA ATTGATCCGA TCACTAAAAC TGCCACTGGA 
GTGGAGTTCG TTAAGCAACG TCAACGCTAC GTTGTGCGGG CCAGAAAAGA AGTGATCCTC 
TCCGCTGGCA CCATAGCCAG TCCCCAGCTT CTCATGTTAT CCGGGATCGG TCCAGCAGAG 
CATCTTAGGG AGCACAACAT AACAGTAATG CAGGATTTGC CAGTTGGTTA CAACTTACAG 
GATCACATAA CACTTAATGG TCTTGTGTTC GTGGTCAATG ATTCGACGGT AAACGATGCT 
CGACTGCTGA ATCCCTCGGA CATATTTAGG TACATCTTCG CAGGACAGGG ACCATATACA 
ATTCCAGGTG GAGCTGAAGC ATTCGCCTTT GTGCGGACTC CCAGTTCCAA ATTTGCAAAG 
GACTATCCTG ATATGGAACT GGTCCTAGGA GCCGGATCCT TAAGTGGAGA TCGCTTTGGC 
ACTATGCGAA ATTTGCTGGG CATCACCGAC GAGTTTTACG ACTACATGTT TGGAGATCTG 
CAGAGCAAGG AGACCTTTGG TCTGGTTCCA GTGCTCCTGC GACCCAAAAG TCGCGGCAGA 
ATATCGCTGC GCAGTCGCAA TCCCTTCCAC TGGCCCCGTA TGGAACCCAA TTTCATGCAG 
CACCCGGATG ATGTGAGGGC CATGATCGAG GGAATCGAAA TGATTCTAAA GCTTTCTAGA 
TCGAAGCCTA TGGCGAAGAT GGGTACTCGT TTCCATGACC GCCCATTTCC GGGTTGCGAG 
AACCTGAAAT TCGCCAGCGA GGCGTACTGG AAATGCTGCT TAAGAAGATA TGGCTCCAGC 
TTGCAGCATC AATCAGGCAC CTGCAAAATG GGTCCTGCAA CGGATAATAC TTCAGTGGTG 
GATGCCCAAC TGCGGATCCA CGGTATCCGT GGATTGCGGG TTGTTGATGC TTCTGTGTTA 
CCTAATGTCC CAGCTGGTCA CACCAATGCC ATTGTGATCA TGGTCGCCGA AAAGGCGGGG 
GATATGATTA AGGATGCTTG GCGCATGCCG ATCACTCCCT TGAGCTCATA G

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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CG6142 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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