KaiR1D cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	KaiR1D
Entrez Gene ID	42473
Full Name	CG3822 gene product from transcript CG3822-RA
Synonyms	CT12759,DKaiRID,DmelCG3822,Dmel\CG3822
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 93A2-93A2

mRNA and Protein(s)

mRNA	Protein	Name
NM_142668.3	NP_650925.1	Kainate-type ionotropic glutamate receptor subunit 1D

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	GRIK2	XP_539059.3
Rattus norvegicus (Norway rat)	Grik2	NP_062182.1
Danio rerio (zebrafish)	grik2	XP_683795.6
Arabidopsis thaliana (thale cress)	GLR3.3	NP_174978.1
Xenopus tropicalis (tropical clawed frog)	grik2	XP_002941901.2
Arabidopsis thaliana (thale cress)	GLUR2	NP_567981.1
Pan troglodytes (chimpanzee)	GRIK2	NP_001158172.1
Gallus gallus (chicken)	GRIK2	XP_426186.4
Drosophila melanogaster (fruit fly)	CG3822	NP_650925.1
Arabidopsis thaliana (thale cress)	GLR2	NP_028351.2
	GRIK2	XP_001086640.2
Mus musculus (house mouse)	Grik2	NP_001104738.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP000801	XP_003437104.1
Oryza sativa (rice)	Os02g0117500	NP_001045687.1
Homo sapiens (human)	GRIK2	NP_068775.1
Bos taurus (cattle)	GRIK2	NP_001179992.1
Caenorhabditis elegans (roundworm)	glr-4	NP_001254126.1
Caenorhabditis elegans (roundworm)	glr-3	NP_492017.3
Arabidopsis thaliana (thale cress)	GLR3.6	NP_190716.3

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following KaiR1D gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the KaiR1D cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa05525	NM_142668.3 Latest version!	Drosophila melanogaster Kainate-type ionotropic glutamate receptor subunit 1D (KaiR1D), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

KaiR1D ( NM_142668.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650925.1 Drosophila melanogaster Kainate-type ionotropic glutamate receptor subunit 1D (KaiR1D), mRNA.

Price & Availability↑

CloneID	OFa05525
Clone ID Related Accession (Same CDS sequence)	NM_142668.3
Accession Version	NM_142668.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2562bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	Kainate-type ionotropic glutamate receptor subunit 1D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jan 16, 2013 this sequence version replaced NM_142668.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGGTCGA GTGGAGTTTT GGTCCTGCCG CTGCTGCTCC TGCAATTAAT TTTAAACTGC 
CGAAAAGCCC AATCACTGCC CGATATCATC AAGATCGGCG GTCTCTTCCA TCCCGCCGAT 
GACCATCAGG AGCTGGCCTT CCGCCAGGCG GTGGACCGCA TCAACGCCGA CCGCTCCATC 
CTGCCGCGCT CCAAGCTGGT GGCCCAAATC GAGCGCATCT CGCCCTTCGA CAGCTTCCAT 
GCCGGGAAAA GGGTTTGTGG CTTACTGAAC ATCGGAGTGG CAGCCATTTT TGGGCCACAA 
TCCTCCCACA CCGCCAGCCA TGTGCAGAGC ATTTGTGACA ACATGGAGAT TCCCCACTTG 
GAGAATCGCT GGGACTACCG GCTGAGACGC GAAAGCTGCC TGGTGAACCT TTATCCGCAT 
CCTAATACGC TTTCCAAGGC TTACGTGGAT ATAGTGCGGC ATTGGGGCTG GAAGACTTTC 
ACCATTATCT ACGAGAACAA TGACGGCATC GTGCGACTGC AGGAGCTGCT CAAGGCGCAC 
GGGATGACGC CCTTTCCCAT TACTGTGCGA CAGCTAAGCG ACAGCGGGGA TTACCGACCC 
CTGCTGAAGC AGATCAAGAA CTCGGCAGAG GCGCACATCG TGCTGGACTG CTCGACGGAG 
CGGATCCACG AGGTGCTGAA GCAGGCGCAG CAGATCGGCA TGATGAGCGA CTACCATAGC 
TACCTGGTGA CCTCGCTGGA TTTGCACACG GTGAATCTCG ATGAGTTTCG CTACGGCGGC 
ACTAATATCA CCGGCTTCCG GCTGATCAAC GAGAAGATTG TGTCGGACGT GGTGCGCCAG 
TGGAGCATCG ACGAGAAGGG TCTGCTGCGG TCCGCCAACC TGACCACCGT GCGTTCGGAA 
ACTGCTCTCA TGTACGACGC AGTTCATCTG TTCGCCAAGG CGCTGCATGA CCTGGACACT 
TCACAACAGA TCGACATTCA TCCCATCAGC TGCGATGGAC AGAGCACCTG GCAGCACGGC 
TTCAGCCTGA TCAACTACAT GAAGATCGTC GAGATGAAGG GCCTGACGAA TGTGATTAAG 
TTCGATCATC AGGGATTCCG CACAGACTTC ATGTTGGACA TTGTCGAGCT CACTCCGGCG 
GGCATTCGCA AGATCGGCAC CTGGAACTCC ACGCTGCCCG ATGGCATCAA CTTTACGCGC 
ACCTTCAGTC AGAAGCAGCA GGAGATCGAG GCAAATCTGA AGAACAAGAC GCTTGTGGTT 
ACAACCATAT TGAGTAATCC GTACTGCATG CGAAAGGAAT CGGCTATTCC CCTAAGTGGC 
AATGATCAGT TTGAGGGCTA TGCGGTGGAT CTGATCCATG AGATCTCTAA GTCACTCGGC 
TTCAACTACA AAATACAACT AGTGCCCGAT GGCAGCTATG GAAGTCTCAA TAAATTGACG 
GGCGAATGGA ACGGCATGAT CCGGGAGTTG CTGGAGCAGC GTGCCGATCT GGCCATTGCG 
GATCTCACCA TCACCTTTGA GCGGGAACAG GCGGTCGACT TCACCACACC CTTCATGAAT 
CTGGGAGTAT CCATATTGTA CCGGAAGCCA ATTAAGCAGC CGCCCAACTT GTTCTCCTTC 
CTGTCTCCGC TATCCTTGGA CGTATGGATC TACATGGCCA CTGCGTACTT GGGTGTCTCA 
GTGCTGCTCT TCATCCTGGC AAAATTCACA CCCTATGAAT GGCCTGCTTA TACGGATGCT 
CATGGCGAAA AGGTGGAGAG TCAGTTCACT CTGCTCAATT GCATGTGGTT TGCCATTGGA 
TCGCTGATGC AGCAAGGATG TGACTTTTTG CCCAAGGCTC TATCCACTCG CATGGTGGCC 
GGCATTTGGT GGTTCTTCAC CCTGATCATG ATCTCCTCAT ACACTGCAAA TCTGGCTGCC 
TTTTTGACTG TGGAGCGTAT GGACTCGCCC ATCGAAAGTG CCGAGGATCT GGCCAAGCAA 
ACGAGGATCA AATACGGAGC GTTGAAGGGC GGCAGCACGG CAGCTTTCTT TAGGGACTCA 
AAGATCTCCA CATATCAGCG CATGTGGTCA TTCATGGAAT CAGCTCGTCC TTCCGTCTTT 
ACAGCCAGCA ATGGCGAAGG TGTGGAAAGG GTTGCCAAGG GAAAAGGATC CTATGCCTTT 
CTGATGGAGT CCACCTCCAT TGAGTACGTG ACCGAACGCA ATTGCGAGCT GACGCAAGTC 
GGTGGAATGC TGGACACCAA GAGCTATGGC ATAGCCACTC CACCGAATTC CCCCTATCGC 
ACTGCCATCA ACAGCGTGAT ACTCAAGCTG CAGGAGGAGG GCAAGCTGCA CATCCTGAAA 
ACCAAGTGGT GGAAAGAGAA GCGGGGCGGC GGCAAGTGTC GTGTGGAGAC CTCCAAATCC 
TCGTCGGCAG CTAATGAACT GGGACTGGCC AATGTGGGCG GCGTGTTCGT GGTCCTGATG 
GGCGGCATGG GGGTGGCCTG CGTCATCGCT GTCTGCGAGT TCGTGTGGAA GTCACGCAAG 
GTGGCCGTGG AGGAACGCCT CAGCGCGATA CTGAACGAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650925.1
CDS	220..2781
Translation	MRSSGVLVLPLLLLQLILNCRKAQSLPDIIKIGGLFHPADDHQELAFRQAVDRINADRSILPRSKLVAQIERISPFDSFHAGKRVCGLLNIGVAAIFGPQSSHTASHVQSICDNMEIPHLENRWDYRLRRESCLVNLYPHPNTLSKAYVDIVRHWGWKTFTIIYENNDGIVRLQELLKAHGMTPFPITVRQLSDSGDYRPLLKQIKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVTSLDLHTVNLDEFRYGGTNITGFRLINEKIVSDVVRQWSIDEKGLLRSANLTTVRSETALMYDAVHLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNVIKFDHQGFRTDFMLDIVELTPAGIRKIGTWNSTLPDGINFTRTFSQKQQEIEANLKNKTLVVTTILSNPYCMRKESAIPLSGNDQFEGYAVDLIHEISKSLGFNYKIQLVPDGSYGSLNKLTGEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPNLFSFLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAIGSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAKQTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTASNGEGVERVAKGKGSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQEEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMGVACVIAVCEFVWKSRKVAVEERLSAILNE

Target ORF information:

RefSeq Version	NM_142668.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster Kainate-type ionotropic glutamate receptor subunit 1D (KaiR1D), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_142668.3

ORF Insert Sequence:

ATGCGGTCGA GTGGAGTTTT GGTCCTGCCG CTGCTGCTCC TGCAATTAAT TTTAAACTGC 
CGAAAAGCCC AATCACTGCC CGATATCATC AAGATCGGCG GTCTCTTCCA TCCCGCCGAT 
GACCATCAGG AGCTGGCCTT CCGCCAGGCG GTGGACCGCA TCAACGCCGA CCGCTCCATC 
CTGCCGCGCT CCAAGCTGGT GGCCCAAATC GAGCGCATCT CGCCCTTCGA CAGCTTCCAT 
GCCGGGAAAA GGGTTTGTGG CTTACTGAAC ATCGGAGTGG CAGCCATTTT TGGGCCACAA 
TCCTCCCACA CCGCCAGCCA TGTGCAGAGC ATTTGTGACA ACATGGAGAT TCCCCACTTG 
GAGAATCGCT GGGACTACCG GCTGAGACGC GAAAGCTGCC TGGTGAACCT TTATCCGCAT 
CCTAATACGC TTTCCAAGGC TTACGTGGAT ATAGTGCGGC ATTGGGGCTG GAAGACTTTC 
ACCATTATCT ACGAGAACAA TGACGGCATC GTGCGACTGC AGGAGCTGCT CAAGGCGCAC 
GGGATGACGC CCTTTCCCAT TACTGTGCGA CAGCTAAGCG ACAGCGGGGA TTACCGACCC 
CTGCTGAAGC AGATCAAGAA CTCGGCAGAG GCGCACATCG TGCTGGACTG CTCGACGGAG 
CGGATCCACG AGGTGCTGAA GCAGGCGCAG CAGATCGGCA TGATGAGCGA CTACCATAGC 
TACCTGGTGA CCTCGCTGGA TTTGCACACG GTGAATCTCG ATGAGTTTCG CTACGGCGGC 
ACTAATATCA CCGGCTTCCG GCTGATCAAC GAGAAGATTG TGTCGGACGT GGTGCGCCAG 
TGGAGCATCG ACGAGAAGGG TCTGCTGCGG TCCGCCAACC TGACCACCGT GCGTTCGGAA 
ACTGCTCTCA TGTACGACGC AGTTCATCTG TTCGCCAAGG CGCTGCATGA CCTGGACACT 
TCACAACAGA TCGACATTCA TCCCATCAGC TGCGATGGAC AGAGCACCTG GCAGCACGGC 
TTCAGCCTGA TCAACTACAT GAAGATCGTC GAGATGAAGG GCCTGACGAA TGTGATTAAG 
TTCGATCATC AGGGATTCCG CACAGACTTC ATGTTGGACA TTGTCGAGCT CACTCCGGCG 
GGCATTCGCA AGATCGGCAC CTGGAACTCC ACGCTGCCCG ATGGCATCAA CTTTACGCGC 
ACCTTCAGTC AGAAGCAGCA GGAGATCGAG GCAAATCTGA AGAACAAGAC GCTTGTGGTT 
ACAACCATAT TGAGTAATCC GTACTGCATG CGAAAGGAAT CGGCTATTCC CCTAAGTGGC 
AATGATCAGT TTGAGGGCTA TGCGGTGGAT CTGATCCATG AGATCTCTAA GTCACTCGGC 
TTCAACTACA AAATACAACT AGTGCCCGAT GGCAGCTATG GAAGTCTCAA TAAATTGACG 
GGCGAATGGA ACGGCATGAT CCGGGAGTTG CTGGAGCAGC GTGCCGATCT GGCCATTGCG 
GATCTCACCA TCACCTTTGA GCGGGAACAG GCGGTCGACT TCACCACACC CTTCATGAAT 
CTGGGAGTAT CCATATTGTA CCGGAAGCCA ATTAAGCAGC CGCCCAACTT GTTCTCCTTC 
CTGTCTCCGC TATCCTTGGA CGTATGGATC TACATGGCCA CTGCGTACTT GGGTGTCTCA 
GTGCTGCTCT TCATCCTGGC AAAATTCACA CCCTATGAAT GGCCTGCTTA TACGGATGCT 
CATGGCGAAA AGGTGGAGAG TCAGTTCACT CTGCTCAATT GCATGTGGTT TGCCATTGGA 
TCGCTGATGC AGCAAGGATG TGACTTTTTG CCCAAGGCTC TATCCACTCG CATGGTGGCC 
GGCATTTGGT GGTTCTTCAC CCTGATCATG ATCTCCTCAT ACACTGCAAA TCTGGCTGCC 
TTTTTGACTG TGGAGCGTAT GGACTCGCCC ATCGAAAGTG CCGAGGATCT GGCCAAGCAA 
ACGAGGATCA AATACGGAGC GTTGAAGGGC GGCAGCACGG CAGCTTTCTT TAGGGACTCA 
AAGATCTCCA CATATCAGCG CATGTGGTCA TTCATGGAAT CAGCTCGTCC TTCCGTCTTT 
ACAGCCAGCA ATGGCGAAGG TGTGGAAAGG GTTGCCAAGG GAAAAGGATC CTATGCCTTT 
CTGATGGAGT CCACCTCCAT TGAGTACGTG ACCGAACGCA ATTGCGAGCT GACGCAAGTC 
GGTGGAATGC TGGACACCAA GAGCTATGGC ATAGCCACTC CACCGAATTC CCCCTATCGC 
ACTGCCATCA ACAGCGTGAT ACTCAAGCTG CAGGAGGAGG GCAAGCTGCA CATCCTGAAA 
ACCAAGTGGT GGAAAGAGAA GCGGGGCGGC GGCAAGTGTC GTGTGGAGAC CTCCAAATCC 
TCGTCGGCAG CTAATGAACT GGGACTGGCC AATGTGGGCG GCGTGTTCGT GGTCCTGATG 
GGCGGCATGG GGGTGGCCTG CGTCATCGCT GTCTGCGAGT TCGTGTGGAA GTCACGCAAG 
GTGGCCGTGG AGGAACGCCT CAGCGCGATA CTGAACGAAT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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KaiR1D cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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