ssp5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	ssp5
Entrez Gene ID	41465
Full Name	short spindle 5
Synonyms	CG14735,Dmel\CG14735,Ssp5,Tes59,anon-WO0140519.127
General protein information	Preferred Names short spindle 5 Names CG14735 gene product from transcript CG14735-RA CG14735-PA ssp5-PA
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 87A5-87A5

mRNA and Protein(s)

mRNA	Protein	Name
NM_141892.3	NP_650149.1	short spindle 5

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following ssp5 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the ssp5 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04631	NM_141892.3 Latest version!	Drosophila melanogaster short spindle 5 (ssp5), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$426.30 $609.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

ssp5 ( NM_141892.3 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_650149.1 Drosophila melanogaster short spindle 5 (ssp5), mRNA.

Price & Availability↑

CloneID	OFa04631
Clone ID Related Accession (Same CDS sequence)	NM_141892.3
Accession Version	NM_141892.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2136bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	short spindle 5
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Dec 17, 2009 this sequence version replaced NM_141892.2. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCTGGATA AGCCAGCCCC AGTGGGGGCC TCATGGTACA CCAATCTGTC CGACTTCCAG 
GTGCAGGCCG TCGAGGCACT GGCCTTCTCG ATTCGGGATG ACAATGCGGA GGGTACTGTG 
TACCGCACCC AGTTCTGTCT CAGTCGCTTG GGAGTCACGC CCATGGTAAA GACCCGGATG 
TTGCGGAAGC TAATTGGGAT TTGTCGCGGC AGCGACTTGG CATTCCTTTA CTTTCTGATG 
GAGGCCTGCT ATAAGGGCAC AGGATCTGCG TACAGTGAAC GGATCCTGAT GTCCGCCATC 
ACCTTTTTGG ATCTGGAGAT GACCATGAGG GAACTGGACA AAATACTGCC GCCGGGAGTG 
GAACGGCTGA ATAAGAAAGA GTCGATAGCT CCGCCAGTGG ATTATCGCTC CATGTCGTTG 
CCAACACCTT TACCGACCAA ACGGGAATCG GATCTCCGAA AGGTCCGCTC GCCCTACTTT 
ACCCCGTTGC CCAAACCAAA GCTACCCAAG GGTGGCGAGA AGTTCACTGC CAAGAGACCC 
TGCCTCGTGG TCTCCTTTCC ATTCTGGCCC GCTGGCGAGA GGCCCAACTA CAAGGTGAAC 
GAGGAGAACC GCTGGTTCGC CGCTTACAGG TTCCAGCCGG TGAAGCGGAT GCTCTTCAAG 
ATGGTCGGCG ACATCATGAC CGACTACTGG ACAAAGATAG ATGGTACTCA ACCGGCGGAG 
AACGAAGCGA TGCCCATGTG CGAGTTCCAC AAGGAGGCAC TGCGGCAGGA GCAGCTGGTG 
AAGGATGCAG CTGTGGTCAA GGCCCACAAA CAGTGCTTGG CTCTCGTGGA TATCACTTCA 
CGGCAGGATG CCCTCCTTAA GAAACGTATC GTGGCCCAGT TGGAAAGGGA CATTGAGGAG 
GTCACGCTGC GTTGGAAACG ACTTCGTGAG CGCCACCATA CGGATGTCAT GTTGTTGGAG 
GATCACGATC AGATGTGTTC GGTGGGCAAA GTGCCTACGG CTGTGCAGGA TATCAGGATA 
AAGTACCTAT CCCAGGAAGC GGACATCGGG CGTCTGAGTG CCAAACCCAC CTTGGGTATC 
CATGTGATCA CCGGCAGGGG TAACGTGAGT CGGTTAAGTA AAGTGCGGGT CTCGGATCCC 
GATGATGACA TCCCATGCCC CACGGTACCC GTGGAGCAAA AGCTGGCCAA ATGTCCACCC 
CCTATACTGG GACACATCAA ACGTCCGCGG AAGGTGTCCA TCACAAAATC CAAATTCGGC 
GACGATAAGC AGTCTTCCTG CAAGAAACCA TCGAAGCCAG GACGCTTTTT TGAAGCTCCT 
CACCAGCACA GTCCCTTTGT GTTCAAATAC CATGCGGTTG CACCGCAGGA TCAAAATCCA 
GATACCAAGG ATGTGATTCG TGCCCAGGCC ATTCGCACCT TAAAGGAGCA AAGTTGCCCC 
TCAAGCGAGG ATAACTACAA CGGACGGATC AATCCCCGAG ACCAGGTGGT GGCGGCCATC 
GTTGAGTGCG CCCAAAACAT GTGGTTTGGC TCCCTGGAGG CTCATCAACG GCGCCTGTCA 
TCTGGCCAAT CCGAAAGACC AACGACTATT GAAGTGCCAG CCAAAAATGA GCCGGAAGAA 
ATCTGCAAAA CAAATGATGC CCTAGATTGG ACAAAGACAA TCAAGAAGTT CGACCCCAAC 
AACCAACATT TAATGGAGCG CCTGCTGCGG GATGGATTTT CCGTACTGAG GCAGGATCCA 
CGCTGCGTCT TCGCCGCTTT TCCCGACTCG CACAAATCCT TTGTGATGGT CGAGTGGATT 
AAGCGTCGAT ATGGGAAGAC CTACTGCCAC GAAGAGATTG TTGATACGAT TGAAAAGGGA 
CTGGCCACAT TTGTGCATGT TGAGAACCAA CTAAACGAAG CACCCAGCGC CAAGCGCGAA 
GGATTCTCGG CAAAGGACAC TTTTGACGAC TTTAAACGTC TGGAGGCGTT GTGCAAGAAA 
TTAAAAACCG AATACCGAAT GCCGCTCAAC GACAAGATCC TGACCCTGAC AAGAATCTGC 
TGGAGTGCCC TGAGTCCCCA CTTGGCCAGA AGCTCATCCA TGCTCAAAAC CTTCTTCGCC 
TATCTGCCAG TTCGATACGC AGACATGCTG AAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_650149.1
CDS	124..2259
Translation	MLDKPAPVGASWYTNLSDFQVQAVEALAFSIRDDNAEGTVYRTQFCLSRLGVTPMVKTRMLRKLIGICRGSDLAFLYFLMEACYKGTGSAYSERILMSAITFLDLEMTMRELDKILPPGVERLNKKESIAPPVDYRSMSLPTPLPTKRESDLRKVRSPYFTPLPKPKLPKGGEKFTAKRPCLVVSFPFWPAGERPNYKVNEENRWFAAYRFQPVKRMLFKMVGDIMTDYWTKIDGTQPAENEAMPMCEFHKEALRQEQLVKDAAVVKAHKQCLALVDITSRQDALLKKRIVAQLERDIEEVTLRWKRLRERHHTDVMLLEDHDQMCSVGKVPTAVQDIRIKYLSQEADIGRLSAKPTLGIHVITGRGNVSRLSKVRVSDPDDDIPCPTVPVEQKLAKCPPPILGHIKRPRKVSITKSKFGDDKQSSCKKPSKPGRFFEAPHQHSPFVFKYHAVAPQDQNPDTKDVIRAQAIRTLKEQSCPSSEDNYNGRINPRDQVVAAIVECAQNMWFGSLEAHQRRLSSGQSERPTTIEVPAKNEPEEICKTNDALDWTKTIKKFDPNNQHLMERLLRDGFSVLRQDPRCVFAAFPDSHKSFVMVEWIKRRYGKTYCHEEIVDTIEKGLATFVHVENQLNEAPSAKREGFSAKDTFDDFKRLEALCKKLKTEYRMPLNDKILTLTRICWSALSPHLARSSSMLKTFFAYLPVRYADMLK

Target ORF information:

RefSeq Version	NM_141892.3
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster short spindle 5 (ssp5), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141892.3

ORF Insert Sequence:

ATGCTGGATA AGCCAGCCCC AGTGGGGGCC TCATGGTACA CCAATCTGTC CGACTTCCAG 
GTGCAGGCCG TCGAGGCACT GGCCTTCTCG ATTCGGGATG ACAATGCGGA GGGTACTGTG 
TACCGCACCC AGTTCTGTCT CAGTCGCTTG GGAGTCACGC CCATGGTAAA GACCCGGATG 
TTGCGGAAGC TAATTGGGAT TTGTCGCGGC AGCGACTTGG CATTCCTTTA CTTTCTGATG 
GAGGCCTGCT ATAAGGGCAC AGGATCTGCG TACAGTGAAC GGATCCTGAT GTCCGCCATC 
ACCTTTTTGG ATCTGGAGAT GACCATGAGG GAACTGGACA AAATACTGCC GCCGGGAGTG 
GAACGGCTGA ATAAGAAAGA GTCGATAGCT CCGCCAGTGG ATTATCGCTC CATGTCGTTG 
CCAACACCTT TACCGACCAA ACGGGAATCG GATCTCCGAA AGGTCCGCTC GCCCTACTTT 
ACCCCGTTGC CCAAACCAAA GCTACCCAAG GGTGGCGAGA AGTTCACTGC CAAGAGACCC 
TGCCTCGTGG TCTCCTTTCC ATTCTGGCCC GCTGGCGAGA GGCCCAACTA CAAGGTGAAC 
GAGGAGAACC GCTGGTTCGC CGCTTACAGG TTCCAGCCGG TGAAGCGGAT GCTCTTCAAG 
ATGGTCGGCG ACATCATGAC CGACTACTGG ACAAAGATAG ATGGTACTCA ACCGGCGGAG 
AACGAAGCGA TGCCCATGTG CGAGTTCCAC AAGGAGGCAC TGCGGCAGGA GCAGCTGGTG 
AAGGATGCAG CTGTGGTCAA GGCCCACAAA CAGTGCTTGG CTCTCGTGGA TATCACTTCA 
CGGCAGGATG CCCTCCTTAA GAAACGTATC GTGGCCCAGT TGGAAAGGGA CATTGAGGAG 
GTCACGCTGC GTTGGAAACG ACTTCGTGAG CGCCACCATA CGGATGTCAT GTTGTTGGAG 
GATCACGATC AGATGTGTTC GGTGGGCAAA GTGCCTACGG CTGTGCAGGA TATCAGGATA 
AAGTACCTAT CCCAGGAAGC GGACATCGGG CGTCTGAGTG CCAAACCCAC CTTGGGTATC 
CATGTGATCA CCGGCAGGGG TAACGTGAGT CGGTTAAGTA AAGTGCGGGT CTCGGATCCC 
GATGATGACA TCCCATGCCC CACGGTACCC GTGGAGCAAA AGCTGGCCAA ATGTCCACCC 
CCTATACTGG GACACATCAA ACGTCCGCGG AAGGTGTCCA TCACAAAATC CAAATTCGGC 
GACGATAAGC AGTCTTCCTG CAAGAAACCA TCGAAGCCAG GACGCTTTTT TGAAGCTCCT 
CACCAGCACA GTCCCTTTGT GTTCAAATAC CATGCGGTTG CACCGCAGGA TCAAAATCCA 
GATACCAAGG ATGTGATTCG TGCCCAGGCC ATTCGCACCT TAAAGGAGCA AAGTTGCCCC 
TCAAGCGAGG ATAACTACAA CGGACGGATC AATCCCCGAG ACCAGGTGGT GGCGGCCATC 
GTTGAGTGCG CCCAAAACAT GTGGTTTGGC TCCCTGGAGG CTCATCAACG GCGCCTGTCA 
TCTGGCCAAT CCGAAAGACC AACGACTATT GAAGTGCCAG CCAAAAATGA GCCGGAAGAA 
ATCTGCAAAA CAAATGATGC CCTAGATTGG ACAAAGACAA TCAAGAAGTT CGACCCCAAC 
AACCAACATT TAATGGAGCG CCTGCTGCGG GATGGATTTT CCGTACTGAG GCAGGATCCA 
CGCTGCGTCT TCGCCGCTTT TCCCGACTCG CACAAATCCT TTGTGATGGT CGAGTGGATT 
AAGCGTCGAT ATGGGAAGAC CTACTGCCAC GAAGAGATTG TTGATACGAT TGAAAAGGGA 
CTGGCCACAT TTGTGCATGT TGAGAACCAA CTAAACGAAG CACCCAGCGC CAAGCGCGAA 
GGATTCTCGG CAAAGGACAC TTTTGACGAC TTTAAACGTC TGGAGGCGTT GTGCAAGAAA 
TTAAAAACCG AATACCGAAT GCCGCTCAAC GACAAGATCC TGACCCTGAC AAGAATCTGC 
TGGAGTGCCC TGAGTCCCCA CTTGGCCAGA AGCTCATCCA TGCTCAAAAC CTTCTTCGCC 
TATCTGCCAG TTCGATACGC AGACATGCTG AAATAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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ssp5 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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