Rpt3R cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	Rpt3R
Entrez Gene ID	41190
Full Name	Regulatory particle triple-A ATPase 3-related
Synonyms	9475,CG9475,DmCG9475,Dm_Rpt3b,Dmel\CG9475,S6
General protein information	Preferred Names Regulatory particle triple-A ATPase 3-related Names CG9475 gene product from transcript CG9475-RD CG9475-PC CG9475-PD Rpt3R-PC Rpt3R-PD regulatory particle triple-A ATPase 3-related
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 3R Map Location: 85E6-85E6

mRNA and Protein(s)

mRNA	Protein	Name
NM_141681.4	NP_649938.2	regulatory particle triple-A ATPase 3-related, isoform C
NM_169308.4	NP_731401.3	regulatory particle triple-A ATPase 3-related, isoform D

Pathways from BioSystems
Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following Rpt3R gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the Rpt3R cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa04384	NM_141681.4 Latest version!	Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant C (Rpt3R), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00
OFa04384	NM_169308.4 Latest version!	Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant D (Rpt3R), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

Rpt3R ( NM_141681.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_649938.2 Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant C (Rpt3R), mRNA.

Price & Availability↑

CloneID	OFa04384
Clone ID Related Accession (Same CDS sequence)	NM_141681.4 , NM_169308.4
Accession Version	NM_141681.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle triple-A ATPase 3-related, isoform C
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_141681.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGTTTGT TAAAGGAGGA AATTGCCCAG TTTCACGAGC AGTCGCTGGA GAAGTATGAT 
GGACTGGATC CGCATGATCT GTATGTACTA TATAAGAAGC TTCAGATGGA GCTGGAGCTC 
ATCCAGGTGC AGGAGGATTA TATCAAGGAG GAGCAACGCA ATCTGAAGAA GGAGTTCATA 
CACGCTCAGG AGGAAGTTAA GCGCATAAAA GCCGTGCCTC TGGTCATTGG CCAGTTTCTG 
GAGGCGGTGG ATGAAAACAA CGGCATAGTG GCCTCCACCA CCGGATCCAA TTACTATGTT 
CGAGTGCTAT CCACCATTGA CAGGGAGCAA CTGAAGCCGT CCTCTTCGGT TGGGCTGCAC 
AAGCAAAGCA ATTGTCTGGT CGATCTGGTG CCACCGGAGG CGGACAGCAC CATATCGATG 
CTATCGCCGG ATGAGAAACC GGATATCAGC TACTCCGACA TTGGAGGCTT GGACATCCAG 
AAACAGGAGA TACGCGAGGC TGTCGAGCTG CCCTTGACCC ACGCCCAGCT TTACAAGCAA 
ATTGGCATCG ATCCCCCACG CGGCGTCCTC CTTTTTGGAC CACCTGGATG TGGCAAAACC 
ATGCTGGCCA AGGCGGTGGC CCATCATACA ACTGCATCAT TTATTCGTGT CGTGGGCTCC 
GAGTTCGTCC AGAAATACCT AGGCGAGGGG CCACGCATGG TGCGAGATCT TTTCCGCCTG 
GCCAAGCAGA ATTCTCCTTC AATTATCTTC ATTGATGAGA TCGATGCGAT TGCCACCAAG 
CGCTTTGATG CACAGACAGG TGCTGATCGC GAGGTGCAGC GCATCCTGCT GGAGCTACTC 
AACCAAATGG ATGGCTTTGA TGAGACCACC AACATTAAGG TTATCATGGC CACCAATCGT 
GCAGATACCT TAGATCCGGC TCTGTTACGA CCCGGCCGTT TGGATCGGAA AATTGAGTTA 
CCATTGCCGG ATCGTCGCCA GAAGCGCTTA GTTTTCACCA CAATCACCTC GAAAATGAAT 
GTGGGTGAGG ATGTGGATCT GGAGGACATC ATTGCACGTC CGGACAAGAT CTCCAATGCG 
GATATCAATG CCATTTGCCA AGAGGCTGGT ATGCATGCAG TGCGCGAGAA TCGCTATGTG 
GTCAATGCCA AGGACTTCGA AAAGGGTTAT AAGACCAGCG TGCGCAAGGA CGAAGCTCAG 
CATGAGTTCT ATAGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_649938.2
CDS	52..1269
Translation	MRLLKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS

Target ORF information:

RefSeq Version	NM_141681.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant C (Rpt3R), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_141681.4

ORF Insert Sequence:

ATGCGTTTGT TAAAGGAGGA AATTGCCCAG TTTCACGAGC AGTCGCTGGA GAAGTATGAT 
GGACTGGATC CGCATGATCT GTATGTACTA TATAAGAAGC TTCAGATGGA GCTGGAGCTC 
ATCCAGGTGC AGGAGGATTA TATCAAGGAG GAGCAACGCA ATCTGAAGAA GGAGTTCATA 
CACGCTCAGG AGGAAGTTAA GCGCATAAAA GCCGTGCCTC TGGTCATTGG CCAGTTTCTG 
GAGGCGGTGG ATGAAAACAA CGGCATAGTG GCCTCCACCA CCGGATCCAA TTACTATGTT 
CGAGTGCTAT CCACCATTGA CAGGGAGCAA CTGAAGCCGT CCTCTTCGGT TGGGCTGCAC 
AAGCAAAGCA ATTGTCTGGT CGATCTGGTG CCACCGGAGG CGGACAGCAC CATATCGATG 
CTATCGCCGG ATGAGAAACC GGATATCAGC TACTCCGACA TTGGAGGCTT GGACATCCAG 
AAACAGGAGA TACGCGAGGC TGTCGAGCTG CCCTTGACCC ACGCCCAGCT TTACAAGCAA 
ATTGGCATCG ATCCCCCACG CGGCGTCCTC CTTTTTGGAC CACCTGGATG TGGCAAAACC 
ATGCTGGCCA AGGCGGTGGC CCATCATACA ACTGCATCAT TTATTCGTGT CGTGGGCTCC 
GAGTTCGTCC AGAAATACCT AGGCGAGGGG CCACGCATGG TGCGAGATCT TTTCCGCCTG 
GCCAAGCAGA ATTCTCCTTC AATTATCTTC ATTGATGAGA TCGATGCGAT TGCCACCAAG 
CGCTTTGATG CACAGACAGG TGCTGATCGC GAGGTGCAGC GCATCCTGCT GGAGCTACTC 
AACCAAATGG ATGGCTTTGA TGAGACCACC AACATTAAGG TTATCATGGC CACCAATCGT 
GCAGATACCT TAGATCCGGC TCTGTTACGA CCCGGCCGTT TGGATCGGAA AATTGAGTTA 
CCATTGCCGG ATCGTCGCCA GAAGCGCTTA GTTTTCACCA CAATCACCTC GAAAATGAAT 
GTGGGTGAGG ATGTGGATCT GGAGGACATC ATTGCACGTC CGGACAAGAT CTCCAATGCG 
GATATCAATG CCATTTGCCA AGAGGCTGGT ATGCATGCAG TGCGCGAGAA TCGCTATGTG 
GTCAATGCCA AGGACTTCGA AAAGGGTTAT AAGACCAGCG TGCGCAAGGA CGAAGCTCAG 
CATGAGTTCT ATAGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

Rpt3R ( NM_169308.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_731401.3 Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant D (Rpt3R), mRNA.

Price & Availability↑

CloneID	OFa04384
Clone ID Related Accession (Same CDS sequence)	NM_141681.4 , NM_169308.4
Accession Version	NM_169308.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1218bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	regulatory particle triple-A ATPase 3-related, isoform D
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033777). On Jul 15, 2014 this sequence version replaced NM_169308.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCGTTTGT TAAAGGAGGA AATTGCCCAG TTTCACGAGC AGTCGCTGGA GAAGTATGAT 
GGACTGGATC CGCATGATCT GTATGTACTA TATAAGAAGC TTCAGATGGA GCTGGAGCTC 
ATCCAGGTGC AGGAGGATTA TATCAAGGAG GAGCAACGCA ATCTGAAGAA GGAGTTCATA 
CACGCTCAGG AGGAAGTTAA GCGCATAAAA GCCGTGCCTC TGGTCATTGG CCAGTTTCTG 
GAGGCGGTGG ATGAAAACAA CGGCATAGTG GCCTCCACCA CCGGATCCAA TTACTATGTT 
CGAGTGCTAT CCACCATTGA CAGGGAGCAA CTGAAGCCGT CCTCTTCGGT TGGGCTGCAC 
AAGCAAAGCA ATTGTCTGGT CGATCTGGTG CCACCGGAGG CGGACAGCAC CATATCGATG 
CTATCGCCGG ATGAGAAACC GGATATCAGC TACTCCGACA TTGGAGGCTT GGACATCCAG 
AAACAGGAGA TACGCGAGGC TGTCGAGCTG CCCTTGACCC ACGCCCAGCT TTACAAGCAA 
ATTGGCATCG ATCCCCCACG CGGCGTCCTC CTTTTTGGAC CACCTGGATG TGGCAAAACC 
ATGCTGGCCA AGGCGGTGGC CCATCATACA ACTGCATCAT TTATTCGTGT CGTGGGCTCC 
GAGTTCGTCC AGAAATACCT AGGCGAGGGG CCACGCATGG TGCGAGATCT TTTCCGCCTG 
GCCAAGCAGA ATTCTCCTTC AATTATCTTC ATTGATGAGA TCGATGCGAT TGCCACCAAG 
CGCTTTGATG CACAGACAGG TGCTGATCGC GAGGTGCAGC GCATCCTGCT GGAGCTACTC 
AACCAAATGG ATGGCTTTGA TGAGACCACC AACATTAAGG TTATCATGGC CACCAATCGT 
GCAGATACCT TAGATCCGGC TCTGTTACGA CCCGGCCGTT TGGATCGGAA AATTGAGTTA 
CCATTGCCGG ATCGTCGCCA GAAGCGCTTA GTTTTCACCA CAATCACCTC GAAAATGAAT 
GTGGGTGAGG ATGTGGATCT GGAGGACATC ATTGCACGTC CGGACAAGAT CTCCAATGCG 
GATATCAATG CCATTTGCCA AGAGGCTGGT ATGCATGCAG TGCGCGAGAA TCGCTATGTG 
GTCAATGCCA AGGACTTCGA AAAGGGTTAT AAGACCAGCG TGCGCAAGGA CGAAGCTCAG 
CATGAGTTCT ATAGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_731401.3
CDS	34..1251
Translation	MRLLKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS

Target ORF information:

RefSeq Version	NM_169308.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster regulatory particle triple-A ATPase 3-related, transcript variant D (Rpt3R), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_169308.4

ORF Insert Sequence:

ATGCGTTTGT TAAAGGAGGA AATTGCCCAG TTTCACGAGC AGTCGCTGGA GAAGTATGAT 
GGACTGGATC CGCATGATCT GTATGTACTA TATAAGAAGC TTCAGATGGA GCTGGAGCTC 
ATCCAGGTGC AGGAGGATTA TATCAAGGAG GAGCAACGCA ATCTGAAGAA GGAGTTCATA 
CACGCTCAGG AGGAAGTTAA GCGCATAAAA GCCGTGCCTC TGGTCATTGG CCAGTTTCTG 
GAGGCGGTGG ATGAAAACAA CGGCATAGTG GCCTCCACCA CCGGATCCAA TTACTATGTT 
CGAGTGCTAT CCACCATTGA CAGGGAGCAA CTGAAGCCGT CCTCTTCGGT TGGGCTGCAC 
AAGCAAAGCA ATTGTCTGGT CGATCTGGTG CCACCGGAGG CGGACAGCAC CATATCGATG 
CTATCGCCGG ATGAGAAACC GGATATCAGC TACTCCGACA TTGGAGGCTT GGACATCCAG 
AAACAGGAGA TACGCGAGGC TGTCGAGCTG CCCTTGACCC ACGCCCAGCT TTACAAGCAA 
ATTGGCATCG ATCCCCCACG CGGCGTCCTC CTTTTTGGAC CACCTGGATG TGGCAAAACC 
ATGCTGGCCA AGGCGGTGGC CCATCATACA ACTGCATCAT TTATTCGTGT CGTGGGCTCC 
GAGTTCGTCC AGAAATACCT AGGCGAGGGG CCACGCATGG TGCGAGATCT TTTCCGCCTG 
GCCAAGCAGA ATTCTCCTTC AATTATCTTC ATTGATGAGA TCGATGCGAT TGCCACCAAG 
CGCTTTGATG CACAGACAGG TGCTGATCGC GAGGTGCAGC GCATCCTGCT GGAGCTACTC 
AACCAAATGG ATGGCTTTGA TGAGACCACC AACATTAAGG TTATCATGGC CACCAATCGT 
GCAGATACCT TAGATCCGGC TCTGTTACGA CCCGGCCGTT TGGATCGGAA AATTGAGTTA 
CCATTGCCGG ATCGTCGCCA GAAGCGCTTA GTTTTCACCA CAATCACCTC GAAAATGAAT 
GTGGGTGAGG ATGTGGATCT GGAGGACATC ATTGCACGTC CGGACAAGAT CTCCAATGCG 
GATATCAATG CCATTTGCCA AGAGGCTGGT ATGCATGCAG TGCGCGAGAA TCGCTATGTG 
GTCAATGCCA AGGACTTCGA AAAGGGTTAT AAGACCAGCG TGCGCAAGGA CGAAGCTCAG 
CATGAGTTCT ATAGCTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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Rpt3R cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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