RpL40 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene
Clones
gRNAs

Summary

Gene Symbol	RpL40
Entrez Gene ID	33629
Full Name	Ribosomal protein L40
Synonyms	BcDNA:RE10554,CEP52,CG2960,DUb52,Dmel\CG2960,Dub52,L40,RPL40,Rpl40,Ub52,Ubi-f,Ubi-f52,Ubiq
General protein information	Preferred Names Ribosomal protein L40 Names CG2960 gene product from transcript CG2960-RB CG2960-PA CG2960-PB RpL40-PA RpL40-PB ribosomal protein L40 ubiquitin ubiquitin 52-AA extension protein ubiquitin fusion 52
Gene Type	protein-coding
Organism	Drosophila melanogaster(fruit fly)
Genome	Chromosome: 2L Map Location: 24E1-24E1

mRNA and Protein(s)

mRNA	Protein	Name
NM_057428.4	NP_476776.1	ribosomal protein L40, isoform A
NM_001273089.2	NP_001260018.1	ribosomal protein L40, isoform B

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	UBA52	NP_001121567.1
Eremothecium gossypii	AGOS_AFR285C	NP_985832.1
Oryza sativa (rice)	Os03g0259500	NP_001049613.2
Homo sapiens (human)	UBA52	NP_001029102.1
Caenorhabditis elegans (roundworm)	ubq-2	NP_499695.1
Saccharomyces cerevisiae (baker's yeast)	RPL40A	NP_012118.1
Kluyveromyces lactis	KLLA0A00616g	XP_451025.2
Schizosaccharomyces pombe (fission yeast)	uep1	NP_593923.1
Pan troglodytes (chimpanzee)	UBA52	XP_003316257.1
Bos taurus (cattle)	UBA52	NP_001069831.1
Danio rerio (zebrafish)	uba52	NP_001032190.1
Saccharomyces cerevisiae (baker's yeast)	RPL40B	NP_013020.3
Schizosaccharomyces pombe (fission yeast)	ubi1	NP_594398.1
Neurospora crassa	NCU05275	XP_961912.2
	UBA52	XP_001115463.2
Mus musculus (house mouse)	Gm7866	XP_006511675.1
Drosophila melanogaster (fruit fly)	RpL40	NP_476776.1
Anopheles gambiae (African malaria mosquito)	AgaP_AGAP007927	XP_317555.2
Magnaporthe oryzae (rice blast fungus)	MGG_06044	XP_003711895.1
Xenopus tropicalis (tropical clawed frog)	uba52	NP_001005123.1

Gene Ontology
Bibliography

Related articles in PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM,
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Hoskins RA, Carlson JW, Kennedy C, Acevedo D, Evans-Holm M, Frise E, Wan KH, Park S, Mendez-Lago M, Rossi F, Villasante A, Dimitri P, Karpen GH, Celniker SE
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Smith CD, Shu S, Mungall CJ, Karpen GH
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)

Combined evidence annotation of transposable elements in genome sequences.
Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, Ashburner M, Anxolabehere D
PLoS computational biology1(2)166-75(2005 Jul)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Results showed the molecular cloning UB and L40 genes from Drosophila kc cells and the first evidence that both of them play roles in the regulation of deltamethrin resistance.
Title: Analysis of UB and L40 resistance related to deltamethrin in Drosophila kc cells.

The following RpL40 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the RpL40 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OFa13711	NM_057428.4 Latest version!	Drosophila melanogaster ribosomal protein L40, transcript variant A (RpL40), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00
OFa13711	NM_001273089.2 Latest version!	Drosophila melanogaster ribosomal protein L40, transcript variant B (RpL40), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$104.30 $149.00

ORF Online Only Promotion

Next-day Shipping ORF Clones ( in default vector with tag)
1 Clone	30% OFF
2-4 Clone	40% OFF
5 or more Clone	50% OFF
All Other ORF Clones
30% OFF

*Business Day

** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

RpL40 ( NM_057428.4 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_476776.1 Drosophila melanogaster ribosomal protein L40, transcript variant A (RpL40), mRNA.

Price & Availability↑

CloneID	OFa13711
Clone ID Related Accession (Same CDS sequence)	NM_057428.4 , NM_001273089.2
Accession Version	NM_057428.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ribosomal protein L40, isoform A
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jan 16, 2013 this sequence version replaced NM_057428.3. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGATCT TCGTGAAAAC CCTCACCGGC AAGACCATCA CCTTGGAGGT GGAGCCTTCT 
GACACCATCG AGAATGTCAA GGCTAAGATC CAGGATAAGG AGGGCATTCC CCCAGATCAG 
CAGCGTCTGA TCTTCGCCGG CAAGCAGCTG GAGGATGGCC GCACTCTGTC CGACTACAAC 
ATTCAGAAGG AGTCCACCCT GCACTTGGTG CTCCGCCTGC GTGGTGGTAT CATTGAGCCC 
TCGCTCAGGA TTCTGGCCCA GAAGTACAAC TGCGACAAGA TGATCTGCCG CAAGTGCTAC 
GCCCGTCTGC ATCCTCGTGC CACCAACTGC CGCAAGAAGA AGTGCGGACA CACCAACAAC 
CTGCGCCCCA AGAAGAAGTT GAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_476776.1
CDS	65..451
Translation	MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNNLRPKKKLK

Target ORF information:

RefSeq Version	NM_057428.4
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ribosomal protein L40, transcript variant A (RpL40), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_057428.4

ORF Insert Sequence:

ATGCAGATCT TCGTGAAAAC CCTCACCGGC AAGACCATCA CCTTGGAGGT GGAGCCTTCT 
GACACCATCG AGAATGTCAA GGCTAAGATC CAGGATAAGG AGGGCATTCC CCCAGATCAG 
CAGCGTCTGA TCTTCGCCGG CAAGCAGCTG GAGGATGGCC GCACTCTGTC CGACTACAAC 
ATTCAGAAGG AGTCCACCCT GCACTTGGTG CTCCGCCTGC GTGGTGGTAT CATTGAGCCC 
TCGCTCAGGA TTCTGGCCCA GAAGTACAAC TGCGACAAGA TGATCTGCCG CAAGTGCTAC 
GCCCGTCTGC ATCCTCGTGC CACCAACTGC CGCAAGAAGA AGTGCGGACA CACCAACAAC 
CTGCGCCCCA AGAAGAAGTT GAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RpL40 ( NM_001273089.2 ) cDNA ORF clone, Drosophila melanogaster(fruit fly) -> NP_001260018.1 Drosophila melanogaster ribosomal protein L40, transcript variant B (RpL40), mRNA.

Price & Availability↑

CloneID	OFa13711
Clone ID Related Accession (Same CDS sequence)	NM_057428.4 , NM_001273089.2
Accession Version	NM_001273089.2 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 387bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-04-24
Organism	Drosophila melanogaster(fruit fly)
Product	ribosomal protein L40, isoform B
Comment	Comment: REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an annotated genomic sequence (NT_033779). On Jul 15, 2014 this sequence version replaced NM_001273089.1. ##Genome-Annotation-Data-START## Annotation Provider :: FlyBase Annotation Status :: Full annotation Annotation Version :: Release 6.26 URL :: http://flybase.org ##Genome-Annotation-Data-END##

ATGCAGATCT TCGTGAAAAC CCTCACCGGC AAGACCATCA CCTTGGAGGT GGAGCCTTCT 
GACACCATCG AGAATGTCAA GGCTAAGATC CAGGATAAGG AGGGCATTCC CCCAGATCAG 
CAGCGTCTGA TCTTCGCCGG CAAGCAGCTG GAGGATGGCC GCACTCTGTC CGACTACAAC 
ATTCAGAAGG AGTCCACCCT GCACTTGGTG CTCCGCCTGC GTGGTGGTAT CATTGAGCCC 
TCGCTCAGGA TTCTGGCCCA GAAGTACAAC TGCGACAAGA TGATCTGCCG CAAGTGCTAC 
GCCCGTCTGC ATCCTCGTGC CACCAACTGC CGCAAGAAGA AGTGCGGACA CACCAACAAC 
CTGCGCCCCA AGAAGAAGTT GAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001260018.1
CDS	123..509
Translation	MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHTNNLRPKKKLK

Target ORF information:

RefSeq Version	NM_001273089.2
Organism	Drosophila melanogaster(fruit fly)
Definition	Drosophila melanogaster ribosomal protein L40, transcript variant B (RpL40), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001273089.2

ORF Insert Sequence:

ATGCAGATCT TCGTGAAAAC CCTCACCGGC AAGACCATCA CCTTGGAGGT GGAGCCTTCT 
GACACCATCG AGAATGTCAA GGCTAAGATC CAGGATAAGG AGGGCATTCC CCCAGATCAG 
CAGCGTCTGA TCTTCGCCGG CAAGCAGCTG GAGGATGGCC GCACTCTGTC CGACTACAAC 
ATTCAGAAGG AGTCCACCCT GCACTTGGTG CTCCGCCTGC GTGGTGGTAT CATTGAGCCC 
TCGCTCAGGA TTCTGGCCCA GAAGTACAAC TGCGACAAGA TGATCTGCCG CAAGTGCTAC 
GCCCGTCTGC ATCCTCGTGC CACCAACTGC CGCAAGAAGA AGTGCGGACA CACCAACAAC 
CTGCGCCCCA AGAAGAAGTT GAAGTAG

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.
G3 (Bethesda, Md.)5(8)1721-36(2015 Jun)
Matthews BB,Dos Santos G,Crosby MA,Emmert DB,St Pierre SE,Gramates LS,Zhou P,Schroeder AJ,Falls K,Strelets V,Russo SM,Gelbart WM,

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.
G3 (Bethesda, Md.)5(8)1737-49(2015 Jun)
Crosby MA,Gramates LS,Dos Santos G,Matthews BB,St Pierre SE,Zhou P,Schroeder AJ,Falls K,Emmert DB,Russo SM,Gelbart WM,

Sequence finishing and mapping of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1625-8(2007 Jun)
Hoskins RA,Carlson JW,Kennedy C,Acevedo D,Evans-Holm M,Frise E,Wan KH,Park S,Mendez-Lago M,Rossi F,Villasante A,Dimitri P,Karpen GH,Celniker SE

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.
Science (New York, N.Y.)316(5831)1586-91(2007 Jun)
Smith CD,Shu S,Mungall CJ,Karpen GH

Combined evidence annotation of transposable elements in genome sequences.
PLoS computational biology1(2)166-75(2005 Jul)
Quesneville H,Bergman CM,Andrieu O,Autard D,Nouaud D,Ashburner M,Anxolabehere D

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RpL40 cDNA ORF clone, Drosophila melanogaster(fruit fly)

Gene

Clones

gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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