mmp30 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	mmp30
Entrez Gene ID	678531
Full Name	matrix metallopeptidase 30
Synonyms	MMPLf,zgc:136396
General protein information	Preferred Names matrix metallopeptidase 30 Names stromelysin-2
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001040291.1	NP_001035381.1	stromelysin-2 precursor

Pathways from BioSystems

Homologies

Xenopus tropicalis (tropical clawed frog)	mmp3	NP_001025502.1
Danio rerio (zebrafish)	mmp30	NP_001035381.1

Gene Ontology
Bibliography

Related articles in PubMed

Spliceosomal protein eftud2 mutation leads to p53-dependent apoptosis in zebrafish neural progenitors.
Lei L, Yan SY, Yang R, Chen JY, Li Y, Bu Y, Chang N, Zhou Q, Zhu X, Li CY, Xiong JW
Nucleic acids research45(6)3422-3436(2017 Apr)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

DHX34 and NBAS form part of an autoregulatory NMD circuit that regulates endogenous RNA targets in human cells, zebrafish and Caenorhabditis elegans.
Longman D, Hug N, Keith M, Anastasaki C, Patton EE, Grimes G, C?ceres JF
Nucleic acids research41(17)8319-31(2013 Sep)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following mmp30 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the mmp30 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa02356	NM_001040291.1 Latest version!	Danio rerio matrix metallopeptidase 30 (mmp30), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$258.30 $369.00

ORF Online Only Promotion

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

mmp30 ( NM_001040291.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001035381.1 Danio rerio matrix metallopeptidase 30 (mmp30), mRNA.

Price & Availability↑

CloneID	ODa02356
Clone ID Related Accession (Same CDS sequence)	NM_001040291.1
Accession Version	NM_001040291.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1428bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-03-09
Organism	Danio rerio(zebrafish)
Product	stromelysin-2 precursor
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115113.1. ##Evidence-Data-START## Transcript exon combination :: BC115113.1, BC093333.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGGCGCATT GGCCAGCAGC TCTCATCCTT GTGGTGTCTT TGACACTCTG TAATGGCGCC 
CCCACAACAA CGCCATCAAC AGAAGACCGT GAAATAGCAG AGGCGTATTT GTCGCAGTTC 
TACAGGGACT CTAAAGCAGC TAAAACCCTC GGCAGAATGT TTGTTTCAAA TCTGGAAAAT 
GAACTGAAGG CCATGCAGTC GTTTTTTGGA CTGGAGGTCA CAGGTCAGCT GGACTCAAAC 
ACTCTGAAGA CGATGAAGCT GCCTCGCTGT GGAGTCACCG ATGTGGCCAG ATTTGGACAC 
TTCGAGGGGA AGCCCAGGTG GAAGCAGAGC GTTGTAACAT ACAGGATAAC TGAATATACA 
ACACAGCTGA GTCAGAGAGA GGTGGACTCC ACTATCGCTA AAGCCTTCCA GCTATACAGT 
GACGTCATTC CTGTAGATTT CAAGCAGATC TTCAGTGGCA CGGCAGACAT CATGATACTC 
TTCAAAGGGG GAGATCATGG AGATTTTTAC CCCTTTGATG GGCCGAATGG TGTTCTGGCT 
CATGCAAACT CCCCTGGCCC TGAGCAGGGA GGAGACACAC ACTTTGATGA TGATGAAAAA 
TGGAGCTTAA GTTCACACAA CATAAACCTG CTTTTGGTGG CGGCTCATGA ATTCGGGCAT 
GCACTGGGAC TCGATCACTC CAGAGACTCT TCGGCTTTAA TGTATCCAAC TTACAGATAT 
GTCAGTACAA ACGCATATAC TTTACCCCGA GATGACCGAC TTGGGGTTCA GGCTTTGTAC 
GGTGTTCGAG CATCAACAAA TAAACCTGAA CCTAAACCTG AACCAAAACC AAACCCACAA 
CCTGCACCAA GCCCACCAGA ACCATGCAAG CGTGACTTGA TATTTGACGC AGCAACCAGA 
ATCCGAGGGG AATTGTACTT TTTTAAAGAT AGGTATTACT GGAAGAAGGG CTACTACAGT 
GGACTTACAC TACTTGAAAT AAAAACCACC TGGCCTTCCA TCGACTCTGT TGATGCTGCC 
TATGAGTTCC AGGACAAAGG CACAAATTTT CTCTTCAAAG GTCAGCAGTT CTGGGCAGTA 
AAAGGCAACA CTATACTGTC TGGATACCCC AAACCCATAT CCACATATGG CTTTCCATCA 
AGTGTGAATA AGATTGACGC AGCCGTACAT GTGAAATCAA CTGGTCGCAC TTTGTTTTTT 
GTTGGGAGCA AATACTGGAG CTTCAATGAC AGAACGAGTA AAATGGACCG AGGCTTTCCT 
AAATCCATCA GTGCTGATTT TCCTGGCATC GGCTCAAAGG TGGACGCGGC TTTTGAAAAC 
TATGGTTATC TGTATTTCTC AGACGGTGCA AGGCAAACAG AGTATATCTT TGCCTCAAGA 
CGAGTGAATC GTGTTTTATT GAACTACGGA TGGCTGGATT GCTACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001035381.1
CDS	33..1460
Translation	MAHWPAALILVVSLTLCNGAPTTTPSTEDREIAEAYLSQFYRDSKAAKTLGRMFVSNLENELKAMQSFFGLEVTGQLDSNTLKTMKLPRCGVTDVARFGHFEGKPRWKQSVVTYRITEYTTQLSQREVDSTIAKAFQLYSDVIPVDFKQIFSGTADIMILFKGGDHGDFYPFDGPNGVLAHANSPGPEQGGDTHFDDDEKWSLSSHNINLLLVAAHEFGHALGLDHSRDSSALMYPTYRYVSTNAYTLPRDDRLGVQALYGVRASTNKPEPKPEPKPNPQPAPSPPEPCKRDLIFDAATRIRGELYFFKDRYYWKKGYYSGLTLLEIKTTWPSIDSVDAAYEFQDKGTNFLFKGQQFWAVKGNTILSGYPKPISTYGFPSSVNKIDAAVHVKSTGRTLFFVGSKYWSFNDRTSKMDRGFPKSISADFPGIGSKVDAAFENYGYLYFSDGARQTEYIFASRRVNRVLLNYGWLDCY

Target ORF information:

RefSeq Version	NM_001040291.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio matrix metallopeptidase 30 (mmp30), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001040291.1

ORF Insert Sequence:

ATGGCGCATT GGCCAGCAGC TCTCATCCTT GTGGTGTCTT TGACACTCTG TAATGGCGCC 
CCCACAACAA CGCCATCAAC AGAAGACCGT GAAATAGCAG AGGCGTATTT GTCGCAGTTC 
TACAGGGACT CTAAAGCAGC TAAAACCCTC GGCAGAATGT TTGTTTCAAA TCTGGAAAAT 
GAACTGAAGG CCATGCAGTC GTTTTTTGGA CTGGAGGTCA CAGGTCAGCT GGACTCAAAC 
ACTCTGAAGA CGATGAAGCT GCCTCGCTGT GGAGTCACCG ATGTGGCCAG ATTTGGACAC 
TTCGAGGGGA AGCCCAGGTG GAAGCAGAGC GTTGTAACAT ACAGGATAAC TGAATATACA 
ACACAGCTGA GTCAGAGAGA GGTGGACTCC ACTATCGCTA AAGCCTTCCA GCTATACAGT 
GACGTCATTC CTGTAGATTT CAAGCAGATC TTCAGTGGCA CGGCAGACAT CATGATACTC 
TTCAAAGGGG GAGATCATGG AGATTTTTAC CCCTTTGATG GGCCGAATGG TGTTCTGGCT 
CATGCAAACT CCCCTGGCCC TGAGCAGGGA GGAGACACAC ACTTTGATGA TGATGAAAAA 
TGGAGCTTAA GTTCACACAA CATAAACCTG CTTTTGGTGG CGGCTCATGA ATTCGGGCAT 
GCACTGGGAC TCGATCACTC CAGAGACTCT TCGGCTTTAA TGTATCCAAC TTACAGATAT 
GTCAGTACAA ACGCATATAC TTTACCCCGA GATGACCGAC TTGGGGTTCA GGCTTTGTAC 
GGTGTTCGAG CATCAACAAA TAAACCTGAA CCTAAACCTG AACCAAAACC AAACCCACAA 
CCTGCACCAA GCCCACCAGA ACCATGCAAG CGTGACTTGA TATTTGACGC AGCAACCAGA 
ATCCGAGGGG AATTGTACTT TTTTAAAGAT AGGTATTACT GGAAGAAGGG CTACTACAGT 
GGACTTACAC TACTTGAAAT AAAAACCACC TGGCCTTCCA TCGACTCTGT TGATGCTGCC 
TATGAGTTCC AGGACAAAGG CACAAATTTT CTCTTCAAAG GTCAGCAGTT CTGGGCAGTA 
AAAGGCAACA CTATACTGTC TGGATACCCC AAACCCATAT CCACATATGG CTTTCCATCA 
AGTGTGAATA AGATTGACGC AGCCGTACAT GTGAAATCAA CTGGTCGCAC TTTGTTTTTT 
GTTGGGAGCA AATACTGGAG CTTCAATGAC AGAACGAGTA AAATGGACCG AGGCTTTCCT 
AAATCCATCA GTGCTGATTT TCCTGGCATC GGCTCAAAGG TGGACGCGGC TTTTGAAAAC 
TATGGTTATC TGTATTTCTC AGACGGTGCA AGGCAAACAG AGTATATCTT TGCCTCAAGA 
CGAGTGAATC GTGTTTTATT GAACTACGGA TGGCTGGATT GCTACTAA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Spliceosomal protein eftud2 mutation leads to p53-dependent apoptosis in zebrafish neural progenitors.
Nucleic acids research45(6)3422-3436(2017 Apr)
Lei L,Yan SY,Yang R,Chen JY,Li Y,Bu Y,Chang N,Zhou Q,Zhu X,Li CY,Xiong JW

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

DHX34 and NBAS form part of an autoregulatory NMD circuit that regulates endogenous RNA targets in human cells, zebrafish and Caenorhabditis elegans.
Nucleic acids research41(17)8319-31(2013 Sep)
Longman D,Hug N,Keith M,Anastasaki C,Patton EE,Grimes G,C?ceres JF

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mmp30 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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