Gene Symbol | LOC564739 |
Entrez Gene ID | 564739 |
Full Name | diacylglycerol kinase beta |
Synonyms | dgka |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
ORF » Species Summary » Danio rerio » LOC564739 cDNA ORF clone
Gene Symbol | LOC564739 |
Entrez Gene ID | 564739 |
Full Name | diacylglycerol kinase beta |
Synonyms | dgka |
Gene Type | protein-coding |
Organism | Danio rerio(zebrafish) |
mRNA | Protein | Name |
---|---|---|
XM_017358380.1 | XP_017213869.1 | diacylglycerol kinase alpha |
XM_017358380.2 | XP_017213869.2 | diacylglycerol kinase alpha isoform X1 |
NM_001366064.1 | NP_001352993.1 | diacylglycerol kinase, alpha b |
XM_021479692.1 | XP_021335367.1 | diacylglycerol kinase beta isoform X2 |
Homo sapiens (human) | DGKA | NP_001336.2 |
DGKA | XP_001112326.1 | |
Canis lupus familiaris (dog) | DGKA | XP_005625534.1 |
Bos taurus (cattle) | DGKA | NP_001071328.1 |
Mus musculus (house mouse) | Dgka | NP_058091.2 |
Xenopus tropicalis (tropical clawed frog) | dgka | XP_002934577.1 |
Danio rerio (zebrafish) | dgka | XP_003199458.2 |
Rattus norvegicus (Norway rat) | Dgka | NP_542965.1 |
Pan troglodytes (chimpanzee) | DGKA | XP_001169946.1 |
Danio rerio (zebrafish) | dgkaa | NP_001038780.1 |
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following LOC564739 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LOC564739 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | ODa44400 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358380.1 | |
Accession Version | XM_017358380.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1449bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-06-23 | |
Organism | Danio rerio(Zebrafish) | |
Product | diacylglycerol kinase alpha | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.6) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213869.1 |
CDS | 248..1696 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358380.1 |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa147932 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358380.2 , NM_001366064.1 | |
Accession Version | NM_001366064.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-03-21 | |
Organism | Danio rerio(zebrafish) | |
Product | diacylglycerol kinase, alpha b | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CU929188.10 and CU928126.9. On Sep 21, 2018 this sequence version replaced XM_017358380.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## Transcript exon combination :: GFIL01021152.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMEA2168446, SAMEA2168447 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001352993.1 |
CDS | 246..2429 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001366064.1 |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa147932 | |
Clone ID Related Accession (Same CDS sequence) | XM_017358380.2 , NM_001366064.1 | |
Accession Version | XM_017358380.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2184bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | diacylglycerol kinase alpha isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XM_017358380.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017213869.2 |
CDS | 246..2429 |
Translation |
Target ORF information:
Target ORF information:
|
XM_017358380.2 |
1 | ATGGCGGACG CAGAATCTGC TTTGGAAAAC GAGATTAACC CTGTTGACTT CATTCAGCTG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | ODa147933 | |
Clone ID Related Accession (Same CDS sequence) | XM_021479692.1 | |
Accession Version | XM_021479692.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1737bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-06-14 | |
Organism | Danio rerio(zebrafish) | |
Product | diacylglycerol kinase beta isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_007122.7) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Danio rerio Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGATGAAAG CTGCCGAATA TCTTGGATGG GACGTGACAG AACTGAAGCC AGTTCTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_021335367.1 |
CDS | 368..2104 |
Translation |
Target ORF information:
Target ORF information:
|
XM_021479692.1 |
1 | ATGATGAAAG CTGCCGAATA TCTTGGATGG GACGTGACAG AACTGAAGCC AGTTCTTGAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. |