cax1 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	cax1
Entrez Gene ID	560283
Full Name	cation/H+ exchanger protein 1
Synonyms	si:dkey-180p18.2,wu:fc25f10,zgc:136271
General protein information	Preferred Names cation/H+ exchanger protein 1 Names cation/H+ exchanger protein 1 type II CAX cation/proton exchanger
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001025507.3	NP_001020678.2	cation/H+ exchanger protein 1

Pathways from BioSystems

Homologies

Schizosaccharomyces pombe (fission yeast)	SPAC521.04c	NP_593099.1
Magnaporthe oryzae (rice blast fungus)	MGG_01381	XP_003714321.1
Neurospora crassa	NCU05360	XP_963351.1
Gallus gallus (chicken)	LOC100859230	XP_004937479.1
Danio rerio (zebrafish)	cax1	NP_001020678.2
Saccharomyces cerevisiae (baker's yeast)	VNX1	NP_014078.1
Kluyveromyces lactis	KLLA0E21033g	XP_454901.1
Xenopus tropicalis (tropical clawed frog)	LOC100127794	NP_001106582.1
Danio rerio (zebrafish)	LOC558687	XP_687025.4
Eremothecium gossypii	AGOS_ADL189W	NP_983907.2

Gene Ontology
Bibliography

Related articles in PubMed

Zebrafish zic2 controls formation of periocular neural crest and choroid fissure morphogenesis.
Sedykh I, Yoon B, Roberson L, Moskvin O, Dewey CN, Grinblat Y
Developmental biology429(1)92-104(2017 09)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

Zebrafish (Danio rerio) endomembrane antiporter similar to a yeast cation/H(+) transporter is required for neural crest development.
Manohar M, Mei H, Franklin AJ, Sweet EM, Shigaki T, Riley BB, Macdiarmid CW, Hirschi K
Biochemistry49(31)6557-66(2010 Aug)

Positive correlation between gene coexpression and positional clustering in the zebrafish genome.
Ng YK, Wu W, Zhang L
BMC genomics1042(2009 Jan)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

initiate characterization of a zebrafish CAX (Cax1); In zebrafish embryos, cax1 was specifically expressed in neural crest cells and was required for animal growth and development.
Title: Zebrafish (Danio rerio) endomembrane antiporter similar to a yeast cation/H(+) transporter is required for neural crest development.

The following cax1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the cax1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31084	NM_001025507.3 Latest version!	Danio rerio cation/H+ exchanger protein 1 (cax1), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	14-16	$391.30 $559.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

cax1 ( NM_001025507.3 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001020678.2 Danio rerio cation/H+ exchanger protein 1 (cax1), mRNA.

Price & Availability↑

CloneID	ODa31084
Clone ID Related Accession (Same CDS sequence)	NM_001025507.3
Accession Version	NM_001025507.3 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2295bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2017-10-14
Organism	Danio rerio(zebrafish)
Product	cation/H+ exchanger protein 1
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC133106.1. On or before Apr 11, 2008 this sequence version replaced NM_001045283.1, NM_001025507.2. ##Evidence-Data-START## Transcript exon combination :: BC133106.1, DQ631793.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA898400, SAMEA898401 [ECO:0000348] ##Evidence-Data-END##

ATGGCTCAAA TCAAACCCAC GATGTCCGTT GATGTGGAGA GTCGGAGGCG ACGGTCCACC 
GAGAGCTCAG AGCCCTTCTT GGACCATGAC CCTAAAGGTC GCCGCTGTAG CTCCCAATGT 
GACAGACTGT GTGTAGCCGG AGCATATCAT GAGATCCCAG ATACTCCTTC ACCCTGCACA 
TCCCAGTATT TCGGACATTA CACTCCGAAA TGCCTCTCTG CCCACAGGCA TTCCATGCAT 
GCACGATGCC CTGAAGACAT TTGGCAGGAG GCGAGCATCA GAACCTCTAT CCGAGCAGAA 
AATGAGGTGG AGGCACACAA AGTTGCCAAC AACTACAAGT TTGGTTTCAG GAAATGGAAG 
AGTCATGTAA CTGAGCGACC AATCGAGGAC CGGTCTGATG TAGTTAAGGA GCTTTATTCT 
GAGCTCAACT ATGTCAAACA ACTTTCAGGA TCTCTGGTCA CTGCTGGAAA TATAGTATAT 
GTGTTGCTAT TTGGGTGGTG GATCTCCTTG TTTTATTTTT TGGTTGGTTT GCTGATGTTT 
TTCACCATTG CTGGCATCCC ATATGGAAAG CTTTGTTTGC AGCTGTCAGG TTATTTCATA 
TGGCCATTTG GAAAAGCATT GCAGAAAAGC AGCAGTCTGG TTAAGAGATG TTGTGTGAAA 
TTCCCCCACT GTGAGGCTAT TCCAGAGGAG GTGGACGAGG TGAAGGAGCC TTTAAAAGAG 
TCCACACCTC TGCTGCACTC CGGTCCTGCT GTCACTGCTG AAATCCCTGT GCCTGCACCA 
CCCACCAAGC CCACACGTTA CTGGTGTCGA TTAAGTACAT ATGTTTGGCT GATACTGGGT 
TACCCTCTGC TGGCTGTGGT TCATTGCCTG GCCATGTTCC TGTCCTGGAT GATGGTGTTC 
ACCATCCCTG TGTCAAAGAT GAACGCCAGG ACCTTGAGCC TCATCCTGCT CATGCCACCA 
GAACAGGTCA AAGTTCGCAA TGTGAAAAAG CCACAAGGGT GTGAGACCAG AGTCCTGCTT 
TGCTGTTACC GAGCCTTCAA CTGGTACTAT TACAAATACA CTGTGGATGG GATCAATGTG 
TTTGCTGTCA ACCTGTTGCC GCTGGTTATC ATCACTCTAA TAATCGGCTA TATGGACAGA 
GAGAATTACT TTGTGAGCTC AGAAGTAAAG TTTGCCACAG CATTGATCTC CATTATCCCA 
TTGTCCTACT ACATCGGGAT GGGAATAGCA AGTATTTCCG CACAGAGTAA CTTTGCTGTG 
GGAGCGGTAG TAAACGCCAC GTTCGGCTCC ATTACAGAGA TGGCCTTCTA CATCACAGCT 
TTACTCCAGG GTCAGCGTGC GGGATCCCAG TGTTATGCAG AACTTGTCAA ATCTGCTCTT 
ACAGGCACCC TGCTGGGCTG TATCCTCTTC ATACCGGGGC TCTGTATGAT CATTGGCGGC 
TTTAAACACA GCGAGCAGCG GTTCAACAGC AGGTCAGCAG GTGTCAGTTC AGCACTGCTC 
TTCATATCAG TAGGAGGTGT TTTCGCCCCC ACGCTCTTTT CGAAGGCTTA TGGAAATTTT 
ATATGCGAGG GCTGCAACAA CCCTCCTGGT AACATCTCAA AGCCCTTCAT ATGCAACAAC 
TGCCACTACG ACCTGAGTGA AAACAACCGA CCTCTGTTTT TGAGTCACAT CGAGCCTTTA 
GTGTACACCG TCTCTGTCCT GTTGCCTGCT GCGTATCTGG TTGGTCTGAT CTTCACCCTC 
AAGACTCATT CGCACATTTA TGACATCCAC ATCAGCGATG GCCACTGTCA CGTTATTAGT 
GATCATCACG CAGTGGCTCA CTGGTCGAGG ACGAGAGCTT TAGTGGTGCT CATTTTGGCT 
ACTATATTGA TGGCTGCTTG TGCTGATCTG AGCACCGAAC ATATCAAGCC TATTATATCC 
AACTCCAGCG TCTCCCAATA TTTTATTGGC GTTACTATAA TAGCCATGGT TCCTGAGCTT 
CCTGAGATAG TCAATGGCGT CCAGTTTGCG CTTCAAAACA ACATCAGTCT CAGTCTGGAG 
GTGGGGAGTT GTTTAGCAGT TCAGGTGTGC ATGCTGCAGA TCCCTCTACT CATCTTGTTC 
AATGCTTTTT ACGATGTTGG ATTCGTTCTC ATATTCAGCG ATTTGCACCT CTGGGCTAGC 
ATCTTCAGCG TTATCCTGGT AAACTACATA TTTATGGATG GAAAGTCAGA CTATTTCCAA 
GGAACGGCTC TGGTGGTTGT TTACCTCATT CTCCTGGCTT TATATTTTTT CGCACCTGCT 
CCTCTTGGAT GTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001020678.2
CDS	50..2344
Translation	MAQIKPTMSVDVESRRRRSTESSEPFLDHDPKGRRCSSQCDRLCVAGAYHEIPDTPSPCTSQYFGHYTPKCLSAHRHSMHARCPEDIWQEASIRTSIRAENEVEAHKVANNYKFGFRKWKSHVTERPIEDRSDVVKELYSELNYVKQLSGSLVTAGNIVYVLLFGWWISLFYFLVGLLMFFTIAGIPYGKLCLQLSGYFIWPFGKALQKSSSLVKRCCVKFPHCEAIPEEVDEVKEPLKESTPLLHSGPAVTAEIPVPAPPTKPTRYWCRLSTYVWLILGYPLLAVVHCLAMFLSWMMVFTIPVSKMNARTLSLILLMPPEQVKVRNVKKPQGCETRVLLCCYRAFNWYYYKYTVDGINVFAVNLLPLVIITLIIGYMDRENYFVSSEVKFATALISIIPLSYYIGMGIASISAQSNFAVGAVVNATFGSITEMAFYITALLQGQRAGSQCYAELVKSALTGTLLGCILFIPGLCMIIGGFKHSEQRFNSRSAGVSSALLFISVGGVFAPTLFSKAYGNFICEGCNNPPGNISKPFICNNCHYDLSENNRPLFLSHIEPLVYTVSVLLPAAYLVGLIFTLKTHSHIYDIHISDGHCHVISDHHAVAHWSRTRALVVLILATILMAACADLSTEHIKPIISNSSVSQYFIGVTIIAMVPELPEIVNGVQFALQNNISLSLEVGSCLAVQVCMLQIPLLILFNAFYDVGFVLIFSDLHLWASIFSVILVNYIFMDGKSDYFQGTALVVVYLILLALYFFAPAPLGC

Target ORF information:

RefSeq Version	NM_001025507.3
Organism	Danio rerio(zebrafish)
Definition	Danio rerio cation/H+ exchanger protein 1 (cax1), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001025507.3

ORF Insert Sequence:

ATGGCTCAAA TCAAACCCAC GATGTCCGTT GATGTGGAGA GTCGGAGGCG ACGGTCCACC 
GAGAGCTCAG AGCCCTTCTT GGACCATGAC CCTAAAGGTC GCCGCTGTAG CTCCCAATGT 
GACAGACTGT GTGTAGCCGG AGCATATCAT GAGATCCCAG ATACTCCTTC ACCCTGCACA 
TCCCAGTATT TCGGACATTA CACTCCGAAA TGCCTCTCTG CCCACAGGCA TTCCATGCAT 
GCACGATGCC CTGAAGACAT TTGGCAGGAG GCGAGCATCA GAACCTCTAT CCGAGCAGAA 
AATGAGGTGG AGGCACACAA AGTTGCCAAC AACTACAAGT TTGGTTTCAG GAAATGGAAG 
AGTCATGTAA CTGAGCGACC AATCGAGGAC CGGTCTGATG TAGTTAAGGA GCTTTATTCT 
GAGCTCAACT ATGTCAAACA ACTTTCAGGA TCTCTGGTCA CTGCTGGAAA TATAGTATAT 
GTGTTGCTAT TTGGGTGGTG GATCTCCTTG TTTTATTTTT TGGTTGGTTT GCTGATGTTT 
TTCACCATTG CTGGCATCCC ATATGGAAAG CTTTGTTTGC AGCTGTCAGG TTATTTCATA 
TGGCCATTTG GAAAAGCATT GCAGAAAAGC AGCAGTCTGG TTAAGAGATG TTGTGTGAAA 
TTCCCCCACT GTGAGGCTAT TCCAGAGGAG GTGGACGAGG TGAAGGAGCC TTTAAAAGAG 
TCCACACCTC TGCTGCACTC CGGTCCTGCT GTCACTGCTG AAATCCCTGT GCCTGCACCA 
CCCACCAAGC CCACACGTTA CTGGTGTCGA TTAAGTACAT ATGTTTGGCT GATACTGGGT 
TACCCTCTGC TGGCTGTGGT TCATTGCCTG GCCATGTTCC TGTCCTGGAT GATGGTGTTC 
ACCATCCCTG TGTCAAAGAT GAACGCCAGG ACCTTGAGCC TCATCCTGCT CATGCCACCA 
GAACAGGTCA AAGTTCGCAA TGTGAAAAAG CCACAAGGGT GTGAGACCAG AGTCCTGCTT 
TGCTGTTACC GAGCCTTCAA CTGGTACTAT TACAAATACA CTGTGGATGG GATCAATGTG 
TTTGCTGTCA ACCTGTTGCC GCTGGTTATC ATCACTCTAA TAATCGGCTA TATGGACAGA 
GAGAATTACT TTGTGAGCTC AGAAGTAAAG TTTGCCACAG CATTGATCTC CATTATCCCA 
TTGTCCTACT ACATCGGGAT GGGAATAGCA AGTATTTCCG CACAGAGTAA CTTTGCTGTG 
GGAGCGGTAG TAAACGCCAC GTTCGGCTCC ATTACAGAGA TGGCCTTCTA CATCACAGCT 
TTACTCCAGG GTCAGCGTGC GGGATCCCAG TGTTATGCAG AACTTGTCAA ATCTGCTCTT 
ACAGGCACCC TGCTGGGCTG TATCCTCTTC ATACCGGGGC TCTGTATGAT CATTGGCGGC 
TTTAAACACA GCGAGCAGCG GTTCAACAGC AGGTCAGCAG GTGTCAGTTC AGCACTGCTC 
TTCATATCAG TAGGAGGTGT TTTCGCCCCC ACGCTCTTTT CGAAGGCTTA TGGAAATTTT 
ATATGCGAGG GCTGCAACAA CCCTCCTGGT AACATCTCAA AGCCCTTCAT ATGCAACAAC 
TGCCACTACG ACCTGAGTGA AAACAACCGA CCTCTGTTTT TGAGTCACAT CGAGCCTTTA 
GTGTACACCG TCTCTGTCCT GTTGCCTGCT GCGTATCTGG TTGGTCTGAT CTTCACCCTC 
AAGACTCATT CGCACATTTA TGACATCCAC ATCAGCGATG GCCACTGTCA CGTTATTAGT 
GATCATCACG CAGTGGCTCA CTGGTCGAGG ACGAGAGCTT TAGTGGTGCT CATTTTGGCT 
ACTATATTGA TGGCTGCTTG TGCTGATCTG AGCACCGAAC ATATCAAGCC TATTATATCC 
AACTCCAGCG TCTCCCAATA TTTTATTGGC GTTACTATAA TAGCCATGGT TCCTGAGCTT 
CCTGAGATAG TCAATGGCGT CCAGTTTGCG CTTCAAAACA ACATCAGTCT CAGTCTGGAG 
GTGGGGAGTT GTTTAGCAGT TCAGGTGTGC ATGCTGCAGA TCCCTCTACT CATCTTGTTC 
AATGCTTTTT ACGATGTTGG ATTCGTTCTC ATATTCAGCG ATTTGCACCT CTGGGCTAGC 
ATCTTCAGCG TTATCCTGGT AAACTACATA TTTATGGATG GAAAGTCAGA CTATTTCCAA 
GGAACGGCTC TGGTGGTTGT TTACCTCATT CTCCTGGCTT TATATTTTTT CGCACCTGCT 
CCTCTTGGAT GTTGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Zebrafish zic2 controls formation of periocular neural crest and choroid fissure morphogenesis.
Developmental biology429(1)92-104(2017 09)
Sedykh I,Yoon B,Roberson L,Moskvin O,Dewey CN,Grinblat Y

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

Zebrafish (Danio rerio) endomembrane antiporter similar to a yeast cation/H(+) transporter is required for neural crest development.
Biochemistry49(31)6557-66(2010 Aug)
Manohar M,Mei H,Franklin AJ,Sweet EM,Shigaki T,Riley BB,Macdiarmid CW,Hirschi K

Positive correlation between gene coexpression and positional clustering in the zebrafish genome.
BMC genomics1042(2009 Jan)
Ng YK,Wu W,Zhang L

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cax1 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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