tbc1d25 cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	tbc1d25
Entrez Gene ID	556338
Full Name	TBC1 domain family, member 25
Synonyms	im:7137114,si:dkeyp-22b2.2
General protein information	Preferred Names TBC1 domain family, member 25 Names TBC1 domain family member 25
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_001128236.1	NP_001121708.1	TBC1 domain family member 25

Pathways from BioSystems

Homologies

Canis lupus familiaris (dog)	TBC1D25	XP_005641377.1
Rattus norvegicus (Norway rat)	Tbc1d25	NP_001100425.1
Danio rerio (zebrafish)	tbc1d25	NP_001121708.1
Xenopus tropicalis (tropical clawed frog)	LOC100495342	XP_002943822.2
Pan troglodytes (chimpanzee)	TBC1D25	XP_001139235.2
Mus musculus (house mouse)	Tbc1d25	NP_001159909.1
	TBC1D25	XP_001098742.1
Homo sapiens (human)	TBC1D25	NP_002527.1
Bos taurus (cattle)	TBC1D25	NP_001192742.1

Gene Ontology
Bibliography

Related articles in PubMed

RESA identifies mRNA-regulatory sequences at high resolution.
Yartseva V, Takacs CM, Vejnar CE, Lee MT, Giraldez AJ
Nature methods14(2)201-207(2017 Feb)

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following tbc1d25 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tbc1d25 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa31834	NM_001128236.1 Latest version!	Danio rerio TBC1 domain family, member 25 (tbc1d25), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	12-14	$510.30 $729.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

tbc1d25 ( NM_001128236.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_001121708.1 Danio rerio TBC1 domain family, member 25 (tbc1d25), mRNA.

Price & Availability↑

CloneID	ODa31834
Clone ID Related Accession (Same CDS sequence)	NM_001128236.1
Accession Version	NM_001128236.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 2592bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2018-11-23
Organism	Danio rerio(zebrafish)
Product	TBC1 domain family member 25
Comment	Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX469917.7. On Jul 31, 2008 this sequence version replaced XM_679107.3. ##Evidence-Data-START## Transcript exon combination :: GFIL01040451.1, GDQH01022642.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA2168446, SAMEA2168447 [ECO:0000348] ##Evidence-Data-END##

ATGTCTGTTG AGGAGGAGAG GGGGGTAGTT CGTGTCAAAG TCAAGAAGTG CGAAGGGGTG 
CTGCCGGTGG AGTTCCGCTC CTTTGCTGTA GATCCCCAAA TAACCTCATT GGAGGTGTTG 
CAACATATCC TGATTAGAGC CTTTGAGCTC AATGGGAAAC GCAACTTTGG GATCAGCTAC 
TTGTCTCGTG ATCGTGCTGG TGTGGAGGTC TACGTGTCTC TTCTGTCTGA CTGGGATTTA 
GATGCTGCAT TTGTCAGTGC AGCAAAGCCT TACCTTCAGC TCAAGATGGA CATCAAACCA 
TCAGAGGACA GTCCTGTTTT GGAGGATTGG GACATAATCA GCCCTAAGGA TGTGATTGGA 
TCAGACCAGT TACAGGGAGA GAAGAGGTCA CTGGCGTCCG CTGCACTTCC TTTCACACAG 
TCGCTGCTTT CCCAGGTGGG TCGTACTCTG TCGCGTGTGC AGCAGGCCTT GAGTTGGTCC 
TATGGAGAGG AAGTGAAACC ATTCAAGCCT CCCTTAAGTG ATGCTGAATT TCACAATTAC 
CTGAACAGCC AAGGTCAGCT GAGTCGACCA GAAGAACTCA GACTTCGTAT TTATCATGGT 
GGAGTTGAGT CATCCTTACG CAAGGTTGTT TGGCGGTACC TTCTCAATGT GTACCCAGAT 
GGTCTCACAG GGCAGGAGAG AATGGATTAC ATGAAGCGGA AAACGAGAGA GTACGACCAG 
CTGAAGAGTG AATGGACAGC ACGAGTCAGT TCAGAGGAAT TGGAGTTTAT TCGGGGAAAT 
GTTCTGAAAG ATGTTCTTCG AACAGATCGA GCACATCCCT ACTACGCGGG CTCAGAGGAC 
AGCCCACATC TAACCGCCTT GACAGACCTT CTCACCACTT TTGCTATTAC ACACCCACAG 
GTGTCTTATT GTCAAGGCAT GAGCGACATT GCCTCGCCAA TCCTTGCCGT CATGGACAAT 
GAAGCTCATG CCTTTATCTG CTTCTGTGGC ATTATGAAAC GACTTGAAGG CAACTTCCGC 
CCTGACGGAC AACTTATGTC CATTAAGTTC CAACATCTCA AGCTGCTTCT GCAGTATTCA 
GACCCAGAGT TTTATTCCTA CCTAGTCTCG AAAGGTGCTG ATGATCTGTT TTTCTGTTAC 
CGCTGGCTTC TTTTGGAGCT TAAGCGTGAA TTTGCTTTTG ATGATGCCCT TCGAATGCTG 
GAGGTCACCT GGAGCTCCTT GCCACCCGAT CCCCCTGAGA CAGAGGTAGA GCTTCTAGGG 
CCAGCGTTTG AGGCAGATCA GTCTGATGGC TCACACAATG TGGACATGGA GGAGATGGAA 
GAGAAGCAGA CCGAAAGGCA GAGGAGACGT CATATGCTAA GGCCATCTCG AGAAGAGGCA 
GATGGTGAAC GTAACCTGGT CATGGAGGAG GAGAGAGGTC CTCGGAAGGA AGGCGAAGGA 
GAGTATGATG TTGAAAGCAT GGTCAGGAAT GACATCCCTG CTCAGCCTCC TTCATTTGAG 
AAGCAGGGGA GTTTTGGAGA ATTCAAATAC TATAATGGCC GTACTGAGGA CAGCTTTGAG 
GTGAATGAAA ATGACTCATC TGATCCCACA TTATCTCCAG TGCAGTTTCA GTCAGCACAC 
TCCACGCTGC CATTCTCGGT CCGCCAGTCA ACAGAGGAGA GTGAGGACGA CCCAGGAGAG 
CAGGAACCTC TTATCAATAA TCTTACACCA TCATCTCCTG GACAGAGAGA CTCACCTAAT 
GGTCAGGCAG CTTCCCCACT GTCAACTCTT CCTTCCGGTC TACCAAACTG GAAAAGTAGC 
TCCAATCAGT CATCTAATTC TGCATCCAGT TGGAGAACAG CATCTCCTGA TGCCTTGTCA 
AAATGCACAT CCTCTTCTTC TAGTGGAGAA AAAGCCTTGT CTCCTGATAA ACCTTCTGGG 
GGGTTTGCAT CCTCGCAACC TGTATTAAAT GGAACTGGGG CTCAGTCCCC ATCAGTGGTT 
CCAGGGAAAT CATTACTGGC ATCTCCATCA CAAGGTTACA ATCATTCTCT TCTCTCATCA 
CCTGTTTTAT CCTTCGGTAA GTCCCCGTCT TTGCCCAAGG CATTCTCCAG TAATCTCCCC 
TCACCCTGCA GACCTACTGG GTCTGGCGTA AGTTCTCCAA ACACAAACAA GCCAGAAGGA 
GGTGGAATTA AGCCCTGCTC GCTCCCCCCT CCCCAAGAAT TTGGGAAAGG GAATCCATTT 
ATGCTTTTCC TTTGCCTCTC TATCCTTCTA GAACACCGTG ACCACATTAT TAAAAACAGC 
CTGGATTACA ATGAGCTGGC CATGCACTTT GACCGACTGG TCCGTCGCCA CAACCTTGGG 
CGCATTCTGC AGCGAGCCAA AGCCCTCTTT GCAGACTACC TTCAGAGTGA GGTATGGGAC 
TCGGAGGAAG GGGACGAAGT CAGCTTGGAC TCCCCAACCA CAGCAGCGAC ATCCCCCCAA 
ACTCCCAGCA CTAGGCCCCC TTTCCTCAAT GTACAGCCCT CTCAGGGTGC CTTCCCAAAC 
TCAACTTATA ATCTGGCAAA TACCATTCCC TCTCCAACAA CTCCCATTGC CCTCTCGCCC 
TCTGCTTCCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_001121708.1
CDS	283..2874
Translation	MSVEEERGVVRVKVKKCEGVLPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISYLSRDRAGVEVYVSLLSDWDLDAAFVSAAKPYLQLKMDIKPSEDSPVLEDWDIISPKDVIGSDQLQGEKRSLASAALPFTQSLLSQVGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHNYLNSQGQLSRPEELRLRIYHGGVESSLRKVVWRYLLNVYPDGLTGQERMDYMKRKTREYDQLKSEWTARVSSEELEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLTTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSIKFQHLKLLLQYSDPEFYSYLVSKGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPETEVELLGPAFEADQSDGSHNVDMEEMEEKQTERQRRRHMLRPSREEADGERNLVMEEERGPRKEGEGEYDVESMVRNDIPAQPPSFEKQGSFGEFKYYNGRTEDSFEVNENDSSDPTLSPVQFQSAHSTLPFSVRQSTEESEDDPGEQEPLINNLTPSSPGQRDSPNGQAASPLSTLPSGLPNWKSSSNQSSNSASSWRTASPDALSKCTSSSSSGEKALSPDKPSGGFASSQPVLNGTGAQSPSVVPGKSLLASPSQGYNHSLLSSPVLSFGKSPSLPKAFSSNLPSPCRPTGSGVSSPNTNKPEGGGIKPCSLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNSLDYNELAMHFDRLVRRHNLGRILQRAKALFADYLQSEVWDSEEGDEVSLDSPTTAATSPQTPSTRPPFLNVQPSQGAFPNSTYNLANTIPSPTTPIALSPSAS

Target ORF information:

RefSeq Version	NM_001128236.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio TBC1 domain family, member 25 (tbc1d25), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_001128236.1

ORF Insert Sequence:

ATGTCTGTTG AGGAGGAGAG GGGGGTAGTT CGTGTCAAAG TCAAGAAGTG CGAAGGGGTG 
CTGCCGGTGG AGTTCCGCTC CTTTGCTGTA GATCCCCAAA TAACCTCATT GGAGGTGTTG 
CAACATATCC TGATTAGAGC CTTTGAGCTC AATGGGAAAC GCAACTTTGG GATCAGCTAC 
TTGTCTCGTG ATCGTGCTGG TGTGGAGGTC TACGTGTCTC TTCTGTCTGA CTGGGATTTA 
GATGCTGCAT TTGTCAGTGC AGCAAAGCCT TACCTTCAGC TCAAGATGGA CATCAAACCA 
TCAGAGGACA GTCCTGTTTT GGAGGATTGG GACATAATCA GCCCTAAGGA TGTGATTGGA 
TCAGACCAGT TACAGGGAGA GAAGAGGTCA CTGGCGTCCG CTGCACTTCC TTTCACACAG 
TCGCTGCTTT CCCAGGTGGG TCGTACTCTG TCGCGTGTGC AGCAGGCCTT GAGTTGGTCC 
TATGGAGAGG AAGTGAAACC ATTCAAGCCT CCCTTAAGTG ATGCTGAATT TCACAATTAC 
CTGAACAGCC AAGGTCAGCT GAGTCGACCA GAAGAACTCA GACTTCGTAT TTATCATGGT 
GGAGTTGAGT CATCCTTACG CAAGGTTGTT TGGCGGTACC TTCTCAATGT GTACCCAGAT 
GGTCTCACAG GGCAGGAGAG AATGGATTAC ATGAAGCGGA AAACGAGAGA GTACGACCAG 
CTGAAGAGTG AATGGACAGC ACGAGTCAGT TCAGAGGAAT TGGAGTTTAT TCGGGGAAAT 
GTTCTGAAAG ATGTTCTTCG AACAGATCGA GCACATCCCT ACTACGCGGG CTCAGAGGAC 
AGCCCACATC TAACCGCCTT GACAGACCTT CTCACCACTT TTGCTATTAC ACACCCACAG 
GTGTCTTATT GTCAAGGCAT GAGCGACATT GCCTCGCCAA TCCTTGCCGT CATGGACAAT 
GAAGCTCATG CCTTTATCTG CTTCTGTGGC ATTATGAAAC GACTTGAAGG CAACTTCCGC 
CCTGACGGAC AACTTATGTC CATTAAGTTC CAACATCTCA AGCTGCTTCT GCAGTATTCA 
GACCCAGAGT TTTATTCCTA CCTAGTCTCG AAAGGTGCTG ATGATCTGTT TTTCTGTTAC 
CGCTGGCTTC TTTTGGAGCT TAAGCGTGAA TTTGCTTTTG ATGATGCCCT TCGAATGCTG 
GAGGTCACCT GGAGCTCCTT GCCACCCGAT CCCCCTGAGA CAGAGGTAGA GCTTCTAGGG 
CCAGCGTTTG AGGCAGATCA GTCTGATGGC TCACACAATG TGGACATGGA GGAGATGGAA 
GAGAAGCAGA CCGAAAGGCA GAGGAGACGT CATATGCTAA GGCCATCTCG AGAAGAGGCA 
GATGGTGAAC GTAACCTGGT CATGGAGGAG GAGAGAGGTC CTCGGAAGGA AGGCGAAGGA 
GAGTATGATG TTGAAAGCAT GGTCAGGAAT GACATCCCTG CTCAGCCTCC TTCATTTGAG 
AAGCAGGGGA GTTTTGGAGA ATTCAAATAC TATAATGGCC GTACTGAGGA CAGCTTTGAG 
GTGAATGAAA ATGACTCATC TGATCCCACA TTATCTCCAG TGCAGTTTCA GTCAGCACAC 
TCCACGCTGC CATTCTCGGT CCGCCAGTCA ACAGAGGAGA GTGAGGACGA CCCAGGAGAG 
CAGGAACCTC TTATCAATAA TCTTACACCA TCATCTCCTG GACAGAGAGA CTCACCTAAT 
GGTCAGGCAG CTTCCCCACT GTCAACTCTT CCTTCCGGTC TACCAAACTG GAAAAGTAGC 
TCCAATCAGT CATCTAATTC TGCATCCAGT TGGAGAACAG CATCTCCTGA TGCCTTGTCA 
AAATGCACAT CCTCTTCTTC TAGTGGAGAA AAAGCCTTGT CTCCTGATAA ACCTTCTGGG 
GGGTTTGCAT CCTCGCAACC TGTATTAAAT GGAACTGGGG CTCAGTCCCC ATCAGTGGTT 
CCAGGGAAAT CATTACTGGC ATCTCCATCA CAAGGTTACA ATCATTCTCT TCTCTCATCA 
CCTGTTTTAT CCTTCGGTAA GTCCCCGTCT TTGCCCAAGG CATTCTCCAG TAATCTCCCC 
TCACCCTGCA GACCTACTGG GTCTGGCGTA AGTTCTCCAA ACACAAACAA GCCAGAAGGA 
GGTGGAATTA AGCCCTGCTC GCTCCCCCCT CCCCAAGAAT TTGGGAAAGG GAATCCATTT 
ATGCTTTTCC TTTGCCTCTC TATCCTTCTA GAACACCGTG ACCACATTAT TAAAAACAGC 
CTGGATTACA ATGAGCTGGC CATGCACTTT GACCGACTGG TCCGTCGCCA CAACCTTGGG 
CGCATTCTGC AGCGAGCCAA AGCCCTCTTT GCAGACTACC TTCAGAGTGA GGTATGGGAC 
TCGGAGGAAG GGGACGAAGT CAGCTTGGAC TCCCCAACCA CAGCAGCGAC ATCCCCCCAA 
ACTCCCAGCA CTAGGCCCCC TTTCCTCAAT GTACAGCCCT CTCAGGGTGC CTTCCCAAAC 
TCAACTTATA ATCTGGCAAA TACCATTCCC TCTCCAACAA CTCCCATTGC CCTCTCGCCC 
TCTGCTTCCT GA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

RESA identifies mRNA-regulatory sequences at high resolution.
Nature methods14(2)201-207(2017 Feb)
Yartseva V,Takacs CM,Vejnar CE,Lee MT,Giraldez AJ

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

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tbc1d25 cDNA ORF clone, Danio rerio(zebrafish)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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