apbb1ip cDNA ORF clone, Danio rerio(zebrafish)

Gene
Clones
gRNAs

Summary

Gene Symbol	apbb1ip
Entrez Gene ID	393607
Full Name	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
Synonyms	zgc:63968
General protein information	Preferred Names amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein Names amyloid beta A4 precursor protein-binding family B member 1-interacting protein APBB1-interacting protein 1
Gene Type	protein-coding
Organism	Danio rerio(zebrafish)

mRNA and Protein(s)

mRNA	Protein	Name
NM_200634.1	NP_956928.1	amyloid beta A4 precursor protein-binding family B member 1-interacting protein

Pathways from BioSystems

Homologies

	APBB1IP	XP_001101993.1
Rattus norvegicus (Norway rat)	Apbb1ip	NP_001094047.1
Xenopus tropicalis (tropical clawed frog)	apbb1ip	NP_001096403.1
Homo sapiens (human)	APBB1IP	NP_061916.3
Canis lupus familiaris (dog)	APBB1IP	XP_535169.3
Mus musculus (house mouse)	Apbb1ip	NP_062329.2
Pan troglodytes (chimpanzee)	APBB1IP	XP_507705.2
Bos taurus (cattle)	APBB1IP	NP_001029765.1
Danio rerio (zebrafish)	apbb1ip	NP_956928.1
Gallus gallus (chicken)	APBB1IP	NP_001006357.2

Gene Ontology
Bibliography

Related articles in PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
Pasquier J, Cabau C, Nguyen T, Jouanno E, Severac D, Braasch I, Journot L, Pontarotti P, Klopp C, Postlethwait JH, Guiguen Y, Bobe J
BMC genomics17368(2016 05)

RFX transcription factors are essential for hearing in mice.
Elkon R, Milon B, Morrison L, Shah M, Vijayakumar S, Racherla M, Leitch CC, Silipino L, Hadi S, Weiss-Gayet M, Barras E, Schmid CD, Ait-Lounis A, Barnes A, Song Y, Eisenman DJ, Eliyahu E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W, Hertzano R
Nature communications68549(2015 Oct)

A new mib allele with a chromosomal deletion covering foxc1a exhibits anterior somite specification defect.
Hsu CH, Lin JS, Po Lai K, Li JW, Chan TF, You MS, Tse WK, Jiang YJ
Scientific reports510673(2015 Jun)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following apbb1ip gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the apbb1ip cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
ODa37913	NM_200634.1 Latest version!	Danio rerio amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (apbb1ip), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	TBD	$342.30 $489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

apbb1ip ( NM_200634.1 ) cDNA ORF clone, Danio rerio(zebrafish) -> NP_956928.1 Danio rerio amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (apbb1ip), mRNA.

Price & Availability↑

CloneID	ODa37913
Clone ID Related Accession (Same CDS sequence)	NM_200634.1
Accession Version	NM_200634.1 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1941bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-12-21
Organism	Danio rerio(zebrafish)
Product	amyloid beta A4 precursor protein-binding family B member 1-interacting protein
Comment	Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC057421.1. On or before Aug 31, 2013 this sequence version replaced XM_005162488.1, XM_693622.1. Sequence Note: This sequence has been modified as follows: removed 22 bp suspected to be vector contamination from the 5' end. ##Evidence-Data-START## Transcript exon combination :: BC057421.1 [ECO:0000332] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end.

ATGGATGACA TTGATGCCAT GTTCAGCGAT ATGCTGCAGG AGATGGATCT CCTAACGCAG 
AGTTTGGATG CAGAAGTAGA CTCTGCACCT TTGGCTAAAC CTCCCACCAT TCCTGAACCT 
CAGGAAATGA ACTTTTCCAT CGGTTTCGCA AATTTTAATG AATCCCTGAA CGATCTGGAA 
GACAATGACT TAGACGCCTT GATGGCTGAC CTTGTGGCAG ATATAAGTGC CACGGAGGAA 
AAGTTTGCCA CAGAAAGAGA CACATCAAAG GGGTCAGTTC CAGTTGCCCC AGCGCCCTCA 
AAGCCTCAGA GTAACTTTAG CCTCCCAGCA TCATTCGACA GCTCTAAACC AGCAACTTCC 
TCCAACTCCA TCGCAGCTCC ACCTCCACCA CCCGCATTTA AACCTTCAAA AGAGGAAGAA 
GAGGAACAGC TCAAAGCAGA TAAAATCAAG CTCGCTTTGG AGAAACTAAA GGAGGCCAAA 
GTTAAAAAGC TGGTGGTGAA AGTGGAGATT ACGGATGGCA GCTCGAAGAC TCTGATGGTG 
GATGAGAGAC AAACAGTTCG AGACGTGATG GACAACCTCT TTGAGAAGAC ACACTGCGAC 
TGCAATGTGG ACTGGAGTGT GTGTGAGACC AACCCTGACT TACAGACTGA GCGGGCCTTT 
GAGGACCACG AGAATCTAGT GGAGCCTCTG TCTACATGGA CGAGGGACAC TGAAAACAAA 
GTGCTTTTCC AGGAAAAAAA ACACAAGTAC GAAGTGTTCA AAAACCCTCA GATCTTTTAT 
TTGTGGAAAA AAGATAAGAA ATCTCTAAAG GATATGAAAG AAAAAGACAA AGAACAACTT 
CTGGAGGAGA ACTTCTGTGG AGCCTCAGTC ATTGTGCCTG ACCTGGAGGG CGTTCTGTAT 
CTGAAGGAGG ATGGAAAAAA ATCCTGGAAA CAGCGCTACT TTTTGCTCCG GGCCTCGGGG 
TTGTATTATT CACCCAAAGG CAAGACAAAG GCTTCAAGAG ATCTGGTGTG CTTGGTGCAG 
TTTGACAATG TGAACGTCTA CTACTGCAAA GAATATAGAA TCAAATACAA AGCACCAACA 
GACCACTGCT TCATGCTCAA GCATCCTCAG ATTCAAAAAG AATCACAGTA CATCAAGTTT 
ATGTGCTGTG ATGACGAGTG GTCCATGAAT CTGTGGGTTA CCGGGATACG TGTTGCCAAG 
TATGGAAAGC AGTTATATGA CAACTACAAG GCTGCTGTGA GGAAAGCATC AGGCTCTGCA 
TCCTGGGCTA ACCGCACTAT CCAGGCCTCC TCCACTGCAT CAACACCCTC TCCTACACCA 
AAAGCCAAAG CTGCAAACGG ACATGCTCCT CAGCCTCCAG TGGAAAACAA GGTTCCATCC 
AACCAGTCAT CATTACCACC ACCTCCACCT TCAATGGATT TCCTGCCTCC TCCACCACCC 
GACCCCATGT TTCCTCCTCC TCCGCCCGCA CCACCAGCAC CACCAGCGCC TCCTGTTCCA 
GTCAGCTCAA CCAAAGTCAA CAAGTTTCCT CCTCCACCTA AATTCCCACA ATCCTCCTTT 
CCTCCTCCAC CAATGGATGA TCTTCCTCCT CCACCACCTC CTCCAGAAAT TGCCGATCTG 
CCCCCTGACT TTCTGCCTCC TCCACCACCT AGTTTTGTGT CTCATGGTGG AGAATCACTT 
CCACCACCAC CACCAGACCC CGTCGCCTCC CTTCCACCAC CTCCTCCTGC TTTTACATCT 
GCAGGCGGAG CACCTCCGCC ACCTCCACCC CCGCCTCCAC CACCAGCTCC AGCACCAGCC 
GTCAACAATC CAGCCGGCAG TGTCAGAAAA GTGGCTCCAC CTCCACCTAA GAGGACTACA 
CCTCAACTAG CAGCGCCCTC AGGTGGCGAC TTCATGTCAG AACTCATGAA TGCCATGCAG 
AAAAAGCGCA CTCAACCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_956928.1
CDS	56..1996
Translation	MDDIDAMFSDMLQEMDLLTQSLDAEVDSAPLAKPPTIPEPQEMNFSIGFANFNESLNDLEDNDLDALMADLVADISATEEKFATERDTSKGSVPVAPAPSKPQSNFSLPASFDSSKPATSSNSIAAPPPPPAFKPSKEEEEEQLKADKIKLALEKLKEAKVKKLVVKVEITDGSSKTLMVDERQTVRDVMDNLFEKTHCDCNVDWSVCETNPDLQTERAFEDHENLVEPLSTWTRDTENKVLFQEKKHKYEVFKNPQIFYLWKKDKKSLKDMKEKDKEQLLEENFCGASVIVPDLEGVLYLKEDGKKSWKQRYFLLRASGLYYSPKGKTKASRDLVCLVQFDNVNVYYCKEYRIKYKAPTDHCFMLKHPQIQKESQYIKFMCCDDEWSMNLWVTGIRVAKYGKQLYDNYKAAVRKASGSASWANRTIQASSTASTPSPTPKAKAANGHAPQPPVENKVPSNQSSLPPPPPSMDFLPPPPPDPMFPPPPPAPPAPPAPPVPVSSTKVNKFPPPPKFPQSSFPPPPMDDLPPPPPPPEIADLPPDFLPPPPPSFVSHGGESLPPPPPDPVASLPPPPPAFTSAGGAPPPPPPPPPPPAPAPAVNNPAGSVRKVAPPPPKRTTPQLAAPSGGDFMSELMNAMQKKRTQP

Target ORF information:

RefSeq Version	NM_200634.1
Organism	Danio rerio(zebrafish)
Definition	Danio rerio amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein (apbb1ip), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_200634.1

ORF Insert Sequence:

ATGGATGACA TTGATGCCAT GTTCAGCGAT ATGCTGCAGG AGATGGATCT CCTAACGCAG 
AGTTTGGATG CAGAAGTAGA CTCTGCACCT TTGGCTAAAC CTCCCACCAT TCCTGAACCT 
CAGGAAATGA ACTTTTCCAT CGGTTTCGCA AATTTTAATG AATCCCTGAA CGATCTGGAA 
GACAATGACT TAGACGCCTT GATGGCTGAC CTTGTGGCAG ATATAAGTGC CACGGAGGAA 
AAGTTTGCCA CAGAAAGAGA CACATCAAAG GGGTCAGTTC CAGTTGCCCC AGCGCCCTCA 
AAGCCTCAGA GTAACTTTAG CCTCCCAGCA TCATTCGACA GCTCTAAACC AGCAACTTCC 
TCCAACTCCA TCGCAGCTCC ACCTCCACCA CCCGCATTTA AACCTTCAAA AGAGGAAGAA 
GAGGAACAGC TCAAAGCAGA TAAAATCAAG CTCGCTTTGG AGAAACTAAA GGAGGCCAAA 
GTTAAAAAGC TGGTGGTGAA AGTGGAGATT ACGGATGGCA GCTCGAAGAC TCTGATGGTG 
GATGAGAGAC AAACAGTTCG AGACGTGATG GACAACCTCT TTGAGAAGAC ACACTGCGAC 
TGCAATGTGG ACTGGAGTGT GTGTGAGACC AACCCTGACT TACAGACTGA GCGGGCCTTT 
GAGGACCACG AGAATCTAGT GGAGCCTCTG TCTACATGGA CGAGGGACAC TGAAAACAAA 
GTGCTTTTCC AGGAAAAAAA ACACAAGTAC GAAGTGTTCA AAAACCCTCA GATCTTTTAT 
TTGTGGAAAA AAGATAAGAA ATCTCTAAAG GATATGAAAG AAAAAGACAA AGAACAACTT 
CTGGAGGAGA ACTTCTGTGG AGCCTCAGTC ATTGTGCCTG ACCTGGAGGG CGTTCTGTAT 
CTGAAGGAGG ATGGAAAAAA ATCCTGGAAA CAGCGCTACT TTTTGCTCCG GGCCTCGGGG 
TTGTATTATT CACCCAAAGG CAAGACAAAG GCTTCAAGAG ATCTGGTGTG CTTGGTGCAG 
TTTGACAATG TGAACGTCTA CTACTGCAAA GAATATAGAA TCAAATACAA AGCACCAACA 
GACCACTGCT TCATGCTCAA GCATCCTCAG ATTCAAAAAG AATCACAGTA CATCAAGTTT 
ATGTGCTGTG ATGACGAGTG GTCCATGAAT CTGTGGGTTA CCGGGATACG TGTTGCCAAG 
TATGGAAAGC AGTTATATGA CAACTACAAG GCTGCTGTGA GGAAAGCATC AGGCTCTGCA 
TCCTGGGCTA ACCGCACTAT CCAGGCCTCC TCCACTGCAT CAACACCCTC TCCTACACCA 
AAAGCCAAAG CTGCAAACGG ACATGCTCCT CAGCCTCCAG TGGAAAACAA GGTTCCATCC 
AACCAGTCAT CATTACCACC ACCTCCACCT TCAATGGATT TCCTGCCTCC TCCACCACCC 
GACCCCATGT TTCCTCCTCC TCCGCCCGCA CCACCAGCAC CACCAGCGCC TCCTGTTCCA 
GTCAGCTCAA CCAAAGTCAA CAAGTTTCCT CCTCCACCTA AATTCCCACA ATCCTCCTTT 
CCTCCTCCAC CAATGGATGA TCTTCCTCCT CCACCACCTC CTCCAGAAAT TGCCGATCTG 
CCCCCTGACT TTCTGCCTCC TCCACCACCT AGTTTTGTGT CTCATGGTGG AGAATCACTT 
CCACCACCAC CACCAGACCC CGTCGCCTCC CTTCCACCAC CTCCTCCTGC TTTTACATCT 
GCAGGCGGAG CACCTCCGCC ACCTCCACCC CCGCCTCCAC CACCAGCTCC AGCACCAGCC 
GTCAACAATC CAGCCGGCAG TGTCAGAAAA GTGGCTCCAC CTCCACCTAA GAGGACTACA 
CCTCAACTAG CAGCGCCCTC AGGTGGCGAC TTCATGTCAG AACTCATGAA TGCCATGCAG 
AAAAAGCGCA CTCAACCATG A

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.
BMC genomics17368(2016 05)
Pasquier J,Cabau C,Nguyen T,Jouanno E,Severac D,Braasch I,Journot L,Pontarotti P,Klopp C,Postlethwait JH,Guiguen Y,Bobe J

RFX transcription factors are essential for hearing in mice.
Nature communications68549(2015 Oct)
Elkon R,Milon B,Morrison L,Shah M,Vijayakumar S,Racherla M,Leitch CC,Silipino L,Hadi S,Weiss-Gayet M,Barras E,Schmid CD,Ait-Lounis A,Barnes A,Song Y,Eisenman DJ,Eliyahu E,Frolenkov GI,Strome SE,Durand B,Zaghloul NA,Jones SM,Reith W,Hertzano R

A new mib allele with a chromosomal deletion covering foxc1a exhibits anterior somite specification defect.
Scientific reports510673(2015 Jun)
Hsu CH,Lin JS,Po Lai K,Li JW,Chan TF,You MS,Tse WK,Jiang YJ