Gene Symbol | THUMPD3 |
Entrez Gene ID | 610222 |
Full Name | THUMP domain containing 3 |
Gene Type | protein-coding |
Organism | Canis lupus familiaris(dog) |
ORF » Species Summary » Canis lupus familiaris » THUMPD3 cDNA ORF clone
Gene Symbol | THUMPD3 |
Entrez Gene ID | 610222 |
Full Name | THUMP domain containing 3 |
Gene Type | protein-coding |
Organism | Canis lupus familiaris(dog) |
mRNA | Protein | Name |
---|---|---|
XM_022406262.1 | XP_022261970.1 | THUMP domain-containing protein 3 isoform X1 |
XM_005632045.3 | XP_005632102.1 | THUMP domain-containing protein 3 isoform X2 |
NM_001252173.1 | NP_001239102.1 | THUMP domain-containing protein 3 |
XM_005632046.2 | XP_005632103.1 | THUMP domain-containing protein 3 isoform X2 |
XM_005632046.3 | XP_005632103.1 | THUMP domain-containing protein 3 isoform X3 |
XM_005632045.2 | XP_005632102.1 | THUMP domain-containing protein 3 isoform X1 |
XM_022406263.1 | XP_022261971.1 | THUMP domain-containing protein 3 isoform X3 |
Danio rerio (zebrafish) | thumpd3 | NP_001082863.1 |
Pan troglodytes (chimpanzee) | THUMPD3 | XP_001145001.2 |
THUMPD3 | XP_001096880.2 | |
Rattus norvegicus (Norway rat) | Thumpd3 | NP_001164019.1 |
Caenorhabditis elegans (roundworm) | CELE_M04B2.2 | NP_502174.2 |
Homo sapiens (human) | THUMPD3 | NP_056268.2 |
Canis lupus familiaris (dog) | THUMPD3 | NP_001239102.1 |
Bos taurus (cattle) | THUMPD3 | NP_001033151.1 |
Mus musculus (house mouse) | Thumpd3 | NP_032214.1 |
Gallus gallus (chicken) | THUMPD3 | XP_004944776.1 |
Xenopus tropicalis (tropical clawed frog) | thumpd3 | NP_001186418.1 |
Development and characterization of a normalized canine retinal cDNA library for genomic and expression studies.
Zangerl B, Sun Q, Pillardy J, Johnson JL, Schweitzer PA, Hernandez AG, Liu L, Acland GM, Aguirre GD
Investigative ophthalmology & visual science47(6)2632-8(2006 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following THUMPD3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the THUMPD3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCe34003 | |
Clone ID Related Accession (Same CDS sequence) | XM_022406262.1 , NM_001252173.1 | |
Accession Version | NM_001252173.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1512bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-10-22 | |
Organism | Canis lupus familiaris(dog) | |
Product | THUMP domain-containing protein 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DT536470.1, GR896512.1, CF409766.1 and CX001790.1. On Nov 6, 2011 this sequence version replaced XR_134471.1. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA103936001, SAMEA103936002 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001239102.1 |
CDS | 109..1620 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001252173.1 |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe21129 | |
Clone ID Related Accession (Same CDS sequence) | XM_005632045.3 , XM_005632045.2 | |
Accession Version | XM_005632045.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-04 | |
Organism | Canis lupus familiaris(dog) | |
Product | THUMP domain-containing protein 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006602.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 5, 2017 this sequence version replaced XM_005632045.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005632102.1 |
CDS | 180..1505 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005632045.3 |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe21129 | |
Clone ID Related Accession (Same CDS sequence) | XM_005632045.3 , XM_005632045.2 | |
Accession Version | XM_005632045.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1326bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-16 | |
Organism | Canis lupus familiaris(Dog) | |
Product | THUMP domain-containing protein 3 isoform X1 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003726095.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 17, 2015 this sequence version replaced XM_005632045.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005632102.1 |
CDS | 132..1457 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005632045.2 |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe21130 | |
Clone ID Related Accession (Same CDS sequence) | XM_005632046.2 , XM_005632046.3 , XM_022406263.1 | |
Accession Version | XM_005632046.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2015-09-16 | |
Organism | Canis lupus familiaris(Dog) | |
Product | THUMP domain-containing protein 3 isoform X2 | |
Comment | MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003726095.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 17, 2015 this sequence version replaced XM_005632046.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005632103.1 |
CDS | 181..1482 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005632046.2 |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe21130 | |
Clone ID Related Accession (Same CDS sequence) | XM_005632046.2 , XM_005632046.3 , XM_022406263.1 | |
Accession Version | XM_005632046.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-04 | |
Organism | Canis lupus familiaris(dog) | |
Product | THUMP domain-containing protein 3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006602.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 5, 2017 this sequence version replaced XM_005632046.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005632103.1 |
CDS | 229..1530 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005632046.3 |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe21130 | |
Clone ID Related Accession (Same CDS sequence) | XM_005632046.2 , XM_005632046.3 , XM_022406263.1 | |
Accession Version | XM_022406263.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1302bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-04 | |
Organism | Canis lupus familiaris(dog) | |
Product | THUMP domain-containing protein 3 isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006602.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_022261971.1 |
CDS | 157..1458 |
Translation |
Target ORF information:
Target ORF information:
|
XM_022406263.1 |
1 | ATGAGCACCA GAAGTCTATA CCAGTTACAG GAAGTGGTCC CAGAAGTTCA TTGTCTGAGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCe34003 | |
Clone ID Related Accession (Same CDS sequence) | XM_022406262.1 , NM_001252173.1 | |
Accession Version | XM_022406262.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1512bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2017-09-04 | |
Organism | Canis lupus familiaris(dog) | |
Product | THUMP domain-containing protein 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_006602.3) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Canis lupus familiaris Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_022261970.1 |
CDS | 108..1619 |
Translation |
Target ORF information:
Target ORF information:
|
XM_022406262.1 |
1 | ATGTCTGATG TTCAGGAAGC CACTAACCAA CTCCTGGATG TGAGCCTTCA TGAGCACCAG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Development and characterization of a normalized canine retinal cDNA library for genomic and expression studies. |