Gene Symbol | tra-3 |
Entrez Gene ID | 178385 |
Full Name | Calpain-5 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » tra-3 cDNA ORF clone
Gene Symbol | tra-3 |
Entrez Gene ID | 178385 |
Full Name | Calpain-5 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_070350.4 | NP_502751.1 | Calpain-5 |
NM_070350.5 | NP_502751.1 | Calpain-5 |
Pan troglodytes (chimpanzee) | CAPN5 | XP_003313296.2 |
Mus musculus (house mouse) | Capn5 | NP_031628.1 |
Danio rerio (zebrafish) | capn5a | NP_001073476.1 |
Canis lupus familiaris (dog) | CAPN5 | XP_005633518.1 |
Danio rerio (zebrafish) | capn5b | XP_001345114.2 |
Caenorhabditis elegans (roundworm) | tra-3 | NP_502751.1 |
Xenopus tropicalis (tropical clawed frog) | capn5 | NP_001006736.1 |
Homo sapiens (human) | CAPN5 | NP_004046.2 |
LOC698077 | XP_002799769.1 | |
Bos taurus (cattle) | CAPN5 | NP_001179823.1 |
Rattus norvegicus (Norway rat) | Capn5 | NP_604456.1 |
Gallus gallus (chicken) | CAPN5 | XP_417278.2 |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
A single nucleotide polymorphism in tra-3 leads to mutation F96L in the encoded calpain-like protease. This mutation attenuates the ability of CB4856 to grow larger at low temperature.
Title: A Caenorhabditis elegans wild type defies the temperature-size rule owing to a single nucleotide polymorphism in tra-3.
The following tra-3 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the tra-3 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa342590 | |
Clone ID Related Accession (Same CDS sequence) | NM_070350.4 , NM_070350.5 | |
Accession Version | NM_070350.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1947bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Calpain-5 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_070350.3. COMPLETENESS: incomplete on both ends. |
1 | ATGACACGGT CCGAAAAGAC CCGTCACTTC GGGAATCAAA ATTATGAAAA ACTGCGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_502751.1 |
CDS | 1..1947 |
Translation |
Target ORF information:
Target ORF information:
|
NM_070350.4 |
1 | ATGACACGGT CCGAAAAGAC CCGTCACTTC GGGAATCAAA ATTATGAAAA ACTGCGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa342590 | |
Clone ID Related Accession (Same CDS sequence) | NM_070350.4 , NM_070350.5 | |
Accession Version | NM_070350.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1947bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Calpain-5 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_070350.4. |
1 | ATGACACGGT CCGAAAAGAC CCGTCACTTC GGGAATCAAA ATTATGAAAA ACTGCGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_502751.1 |
CDS | 35..1981 |
Translation |
Target ORF information:
Target ORF information:
|
NM_070350.5 |
1 | ATGACACGGT CCGAAAAGAC CCGTCACTTC GGGAATCAAA ATTATGAAAA ACTGCGGAAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |