Gene Symbol | skn-1 |
Entrez Gene ID | 177343 |
Full Name | Protein skinhead-1 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
ORF » Species Summary » Caenorhabditis elegans » skn-1 cDNA ORF clone
Gene Symbol | skn-1 |
Entrez Gene ID | 177343 |
Full Name | Protein skinhead-1 |
Gene Type | protein-coding |
Organism | Caenorhabditis elegans |
mRNA | Protein | Name |
---|---|---|
NM_001306754.1 | NP_001293683.1 | Protein skinhead-1 |
NM_171345.5 | NP_741404.1 | Protein skinhead-1 |
NM_171347.6 | NP_741406.1 | Protein skinhead-1 |
NM_171345.4 | NP_741404.1 | Protein skinhead-1 |
NM_171347.5 | NP_741406.1 | Protein skinhead-1 |
NM_171346.3 | NP_741405.1 | Protein skinhead-1 |
NM_171346.4 | NP_741405.1 | Protein skinhead-1 |
NM_001372824.1 | NP_001360292.1 | BZIP domain-containing protein |
Genome sequence of the nematode C. elegans: a platform for investigating biology.
Science (New York, N.Y.)282(5396)2012-8(1998 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
results of this study demonstrate a central role of PMK-1 for the processing of cellular responses to abiotic and biotic stressors, with the promoting effects of PMK-1 on Cd resistance mostly mediated by the transcription factors SKN-1 and DAF-16
Title: PMK-1 p38 MAPK promotes cadmium stress resistance, the expression of SKN-1/Nrf and DAF-16 target genes, and protein biosynthesis in Caenorhabditis elegans.
SKN-1 is required along with ELT-3 for the oxidative stress response. SKN-1 interacts with ELT-3.
Title: The Oxidative Stress Response in
a missense mutation in the conserved XREP-4 F-box domain that reduces interaction with SKR-1 but not WDR-23 strongly attenuates SKN-1-dependent gene activation. These results are consistent with XREP-4 influencing the SKN-1 stress response by functioning as a bridge between WDR-23 and the ubiquitin ligase component SKR-1.
Title: F-Box Protein XREP-4 Is a New Regulator of the Oxidative Stress Response in
Findings show that Nrf2/skn-1 is expressed in interneurons involved in chemosensation in mice and C. elegans, and that genetic deletion of skn-1 results in impaired sensory integration. The inability to activate skn-1 signaling causes the skn-1 worms to linger in inadequate food patches rather than migrate toward new potential food sources.
Title: skn-1 is required for interneuron sensory integration and foraging behavior in Caenorhabditis elegans.
The following skn-1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the skn-1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OCa342637 | |
Clone ID Related Accession (Same CDS sequence) | NM_001306754.1 , NM_001372824.1 | |
Accession Version | NM_001306754.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). COMPLETENESS: incomplete on both ends. |
1 | ATGCAAAACG ACAGTCTTCA AGCAGTTGTA TCAAATGGAC AGATTGACTA TGATCATTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001293683.1 |
CDS | 1..672 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001306754.1 |
1 | ATGCAAAACG ACAGTCTTCA AGCAGTTGTA TCAAATGGAC AGATTGACTA TGATCATTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa342637 | |
Clone ID Related Accession (Same CDS sequence) | NM_001306754.1 , NM_001372824.1 | |
Accession Version | NM_001372824.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 672bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | BZIP domain-containing protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). |
1 | ATGCAAAACG ACAGTCTTCA AGCAGTTGTA TCAAATGGAC AGATTGACTA TGATCATTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001360292.1 |
CDS | 1326..1997 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001372824.1 |
1 | ATGCAAAACG ACAGTCTTCA AGCAGTTGTA TCAAATGGAC AGATTGACTA TGATCATTCC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343352 | |
Clone ID Related Accession (Same CDS sequence) | NM_171347.6 , NM_171347.5 | |
Accession Version | NM_171347.6 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 933bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_171347.5. |
1 | ATGTCACTTC CATCTGATTT TGCCTCCTCT CTTCTGGCAT CCTCTACCAC CACCAACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741406.1 |
CDS | 135..1067 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171347.6 |
1 | ATGTCACTTC CATCTGATTT TGCCTCCTCT CTTCTGGCAT CCTCTACCAC CACCAACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343352 | |
Clone ID Related Accession (Same CDS sequence) | NM_171347.6 , NM_171347.5 | |
Accession Version | NM_171347.5 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 933bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_171347.4. COMPLETENESS: incomplete on both ends. |
1 | ATGTCACTTC CATCTGATTT TGCCTCCTCT CTTCTGGCAT CCTCTACCAC CACCAACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741406.1 |
CDS | 1..933 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171347.5 |
1 | ATGTCACTTC CATCTGATTT TGCCTCCTCT CTTCTGGCAT CCTCTACCAC CACCAACACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343351 | |
Clone ID Related Accession (Same CDS sequence) | NM_171345.5 , NM_171345.4 | |
Accession Version | NM_171345.5 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1872bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_171345.4. |
1 | ATGGGCGGTT CATCACGCCG TCAGCGAAGT ACGTCGGCGA CGAGACGAGA CGATAAACGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741404.1 |
CDS | 140..2011 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171345.5 |
1 | ATGGGCGGTT CATCACGCCG TCAGCGAAGT ACGTCGGCGA CGAGACGAGA CGATAAACGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343351 | |
Clone ID Related Accession (Same CDS sequence) | NM_171345.5 , NM_171345.4 | |
Accession Version | NM_171345.4 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1872bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_171345.3. COMPLETENESS: incomplete on both ends. |
1 | ATGGGCGGTT CATCACGCCG TCAGCGAAGT ACGTCGGCGA CGAGACGAGA CGATAAACGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741404.1 |
CDS | 1..1872 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171345.4 |
1 | ATGGGCGGTT CATCACGCCG TCAGCGAAGT ACGTCGGCGA CGAGACGAGA CGATAAACGA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343353 | |
Clone ID Related Accession (Same CDS sequence) | NM_171346.3 , NM_171346.4 | |
Accession Version | NM_171346.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1602bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-04-08 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Jun 26, 2012 this sequence version replaced NM_171346.2. COMPLETENESS: incomplete on both ends. |
1 | ATGTACACGG ACAGCAATAA TAGGAACTTT GATGAAGTCA ACCATCAGCA TCAACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741405.1 |
CDS | 1..1602 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171346.3 |
1 | ATGTACACGG ACAGCAATAA TAGGAACTTT GATGAAGTCA ACCATCAGCA TCAACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OCa343353 | |
Clone ID Related Accession (Same CDS sequence) | NM_171346.3 , NM_171346.4 | |
Accession Version | NM_171346.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1602bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-10-17 | |
Organism | Caenorhabditis elegans | |
Product | Protein skinhead-1 | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_171346.3. |
1 | ATGTACACGG ACAGCAATAA TAGGAACTTT GATGAAGTCA ACCATCAGCA TCAACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_741405.1 |
CDS | 365..1966 |
Translation |
Target ORF information:
Target ORF information:
|
NM_171346.4 |
1 | ATGTACACGG ACAGCAATAA TAGGAACTTT GATGAAGTCA ACCATCAGCA TCAACAAGAA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Genome sequence of the nematode C. elegans: a platform for investigating biology. |