Gene Symbol | VPS4A |
Entrez Gene ID | 618168 |
Full Name | vacuolar protein sorting 4 homolog A |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » VPS4A cDNA ORF clone
Gene Symbol | VPS4A |
Entrez Gene ID | 618168 |
Full Name | vacuolar protein sorting 4 homolog A |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_015475775.1 | XP_015331261.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
XM_010814567.2 | XP_010812869.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
NM_001046615.1 | NP_001040080.1 | vacuolar protein sorting-associated protein 4A |
XM_005218734.3 | XP_005218791.1 | vacuolar protein sorting-associated protein 4A isoform X2 |
XM_024978550.1 | XP_024834318.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
XM_005218732.3 | XP_005218789.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
XM_005218732.4 | XP_005218789.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
XM_024978549.1 | XP_024834317.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
XM_010814567.3 | XP_010812869.1 | vacuolar protein sorting-associated protein 4A isoform X1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following VPS4A gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the VPS4A cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40942 | |
Clone ID Related Accession (Same CDS sequence) | NM_001046615.1 | |
Accession Version | NM_001046615.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 957bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC113224.1. On Sep 7, 2006 this sequence version replaced XM_870492.1. ##Evidence-Data-START## Transcript exon combination :: BC113224.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN03145420, SAMN03145438 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001040080.1 |
CDS | 129..1085 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_015475775.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_015331261.1 |
CDS | 156..1469 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_010814567.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_010814567.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812869.1 |
CDS | 156..1469 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_024978550.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024834318.1 |
CDS | 157..1470 |
Translation |
Target ORF information:
Target ORF information:
|
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1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_005218732.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005218732.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005218789.1 |
CDS | 156..1469 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_005218732.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005218732.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005218789.1 |
CDS | 157..1470 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_024978549.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024834317.1 |
CDS | 157..1470 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28513 | |
Clone ID Related Accession (Same CDS sequence) | XM_015475775.1 , XM_010814567.2 , XM_024978550.1 , XM_005218732.3 , XM_005218732.4 , XM_024978549.1 , XM_010814567.3 | |
Accession Version | XM_010814567.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1314bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_010814567.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_010812869.1 |
CDS | 157..1470 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28514 | |
Clone ID Related Accession (Same CDS sequence) | XM_005218734.3 | |
Accession Version | XM_005218734.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1311bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | ![]() |
Clone information | Clone Map | ![]() |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | vacuolar protein sorting-associated protein 4A isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104464.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005218734.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005218791.1 |
CDS | 156..1466 |
Translation |
Target ORF information:
Target ORF information:
|
![]() |
1 | ATGACAACGT CAACCCTCCA GAAAGCCATT GATCTGGTGA CAAAAGCCAC AGAAGAGGAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |