Gene Symbol | TOP3B |
Entrez Gene ID | 537418 |
Full Name | DNA topoisomerase III beta |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » TOP3B cDNA ORF clone
Gene Symbol | TOP3B |
Entrez Gene ID | 537418 |
Full Name | DNA topoisomerase III beta |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
NM_001206706.1 | NP_001193635.1 | DNA topoisomerase 3-beta-1 |
NM_001206706.2 | NP_001193635.1 | DNA topoisomerase 3-beta-1 |
XM_024977372.1 | XP_024833140.1 | DNA topoisomerase 3-beta-1 isoform X1 |
XM_024977374.1 | XP_024833142.1 | DNA topoisomerase 3-beta-1 isoform X2 |
XM_024977373.1 | XP_024833141.1 | DNA topoisomerase 3-beta-1 isoform X1 |
Pan troglodytes (chimpanzee) | TOP3B | XP_515006.3 |
Rattus norvegicus (Norway rat) | Top3b | NP_001099331.1 |
Mus musculus (house mouse) | Top3b | NP_035754.1 |
Gallus gallus (chicken) | TOP3B | NP_001006181.1 |
Drosophila melanogaster (fruit fly) | Top3beta | NP_511059.2 |
Caenorhabditis elegans (roundworm) | Y48C3A.14 | NP_001254381.1 |
Oryza sativa (rice) | Os09g0500600 | NP_001063578.1 |
Homo sapiens (human) | TOP3B | NP_003926.1 |
Xenopus tropicalis (tropical clawed frog) | top3b | NP_001182501.1 |
TOP3B | XP_001088462.2 | |
Bos taurus (cattle) | TOP3B | NP_001193635.1 |
Danio rerio (zebrafish) | LOC793414 | XP_003198651.1 |
Arabidopsis thaliana (thale cress) | AT2G32000 | NP_180760.2 |
Canis lupus familiaris (dog) | TOP3B | XP_005636690.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
Characterization of 954 bovine full-CDS cDNA sequences.
Harhay GP, Sonstegard TS, Keele JW, Heaton MP, Clawson ML, Snelling WM, Wiedmann RT, Van Tassell CP, Smith TP
BMC genomics6166(2005 Nov)
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle.
Smith TP, Grosse WM, Freking BA, Roberts AJ, Stone RT, Casas E, Wray JE, White J, Cho J, Fahrenkrug SC, Bennett GL, Heaton MP, Laegreid WW, Rohrer GA, Chitko-McKown CG, Pertea G, Holt I, Karamycheva S, Liang F, Quackenbush J, Keele JW
Genome research11(4)626-30(2001 Apr)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The following TOP3B gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the TOP3B cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa224346 | |
Clone ID Related Accession (Same CDS sequence) | XM_024977372.1 , XM_024977373.1 | |
Accession Version | XM_024977372.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DNA topoisomerase 3-beta-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037344.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024833140.1 |
CDS | 1060..3645 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024977372.1 |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa224346 | |
Clone ID Related Accession (Same CDS sequence) | XM_024977372.1 , XM_024977373.1 | |
Accession Version | XM_024977373.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DNA topoisomerase 3-beta-1 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037344.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024833141.1 |
CDS | 191..2776 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024977373.1 |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa224347 | |
Clone ID Related Accession (Same CDS sequence) | XM_024977374.1 | |
Accession Version | XM_024977374.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2457bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | DNA topoisomerase 3-beta-1 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037344.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024833142.1 |
CDS | 1061..3517 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024977374.1 |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa01739 | |
Clone ID Related Accession (Same CDS sequence) | NM_001206706.1 , NM_001206706.2 | |
Accession Version | NM_001206706.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2011-10-25 | |
Organism | Bos taurus(cattle) | |
Product | DNA topoisomerase 3-beta-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAFC03127735.1, BT026532.1, EV701465.1, EE359622.1, CX735376.1 and AAFC03129757.1. On or before May 4, 2011 this sequence version replaced XM_617580.4, XM_002694700.1. Sequence Note: This RefSeq record was created from transcripts of different strains and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. COMPLETENESS: complete on the 3' end. |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001193635.1 |
CDS | 175..2760 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001206706.1 |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa01739 | |
Clone ID Related Accession (Same CDS sequence) | NM_001206706.1 , NM_001206706.2 | |
Accession Version | NM_001206706.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2586bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-29 | |
Organism | Bos taurus(cattle) | |
Product | DNA topoisomerase 3-beta-1 | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from NKLS02000017.1, BT026532.1, EV701465.1, EE359622.1 and CX735376.1. On May 30, 2018 this sequence version replaced NM_001206706.1. Sequence Note: This RefSeq record was created from transcripts of different strains and genomic sequence data because no single transcript from the same strain was available for the full length of the gene. The extent of this transcript is supported by transcript alignments and orthologous data. ##Evidence-Data-START## CDS exon combination :: SRR6764281.4972.1 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN03145413, SAMN03145415 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001193635.1 |
CDS | 175..2760 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001206706.2 |
1 | ATGAAGACCG TGCTCATGGT GGCCGAGAAG CCGTCCTTGG CCCAGTCCAT CGCCAGGATC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Characterization of 954 bovine full-CDS cDNA sequences. |
Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. |