Gene Symbol | BOLA-NC1 |
Entrez Gene ID | 510417 |
Full Name | non-classical MHC class I antigen |
Synonyms | BoLA,BoLA-NC |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » BOLA-NC1 cDNA ORF clone
Gene Symbol | BOLA-NC1 |
Entrez Gene ID | 510417 |
Full Name | non-classical MHC class I antigen |
Synonyms | BoLA,BoLA-NC |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005223620.4 | XP_005223677.1 | non-classical MHC class I antigen isoform X3 |
XM_005223618.3 | XP_005223675.1 | non-classical MHC class I antigen isoform X1 |
XM_005223618.4 | XP_005223675.1 | non-classical MHC class I antigen isoform X1 |
XM_024983519.1 | XP_024839287.1 | non-classical MHC class I antigen isoform X4 |
NM_001105616.2 | NP_001099086.1 | non-classical MHC class I antigen precursor |
XM_005223620.3 | XP_005223677.1 | non-classical MHC class I antigen isoform X2 |
XM_024983518.1 | XP_024839286.1 | non-classical MHC class I antigen isoform X2 |
Canis lupus familiaris (dog) | DLA-64 | NP_001014400.1 |
Bos taurus (cattle) | BOLA-NC1 | NP_001099086.1 |
Danio rerio (zebrafish) | mhc1uka | XP_005159527.1 |
Danio rerio (zebrafish) | LOC101883648 | XP_005161941.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100127707 | NP_001265363.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100493954 | XP_002940102.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100495225 | XP_002940109.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100497446 | XP_004918996.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494770 | XP_002940106.1 |
Xenopus tropicalis (tropical clawed frog) | mhc1b2 | NP_001234924.1 |
Bos taurus (cattle) | BOLA-A | NP_001035644.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100490553 | XP_002938999.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100497122 | XP_004918998.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100496024 | XP_002940114.2 |
Xenopus tropicalis (tropical clawed frog) | LOC101734387 | XP_004918994.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100495382 | XP_002940110.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494618 | XP_002940105.1 |
Canis lupus familiaris (dog) | DLA-12 | NP_001014401.1 |
Bos taurus (cattle) | BOLA | NP_001033607.1 |
Bos taurus (cattle) | JSP.1 | NP_001035588.1 |
Danio rerio (zebrafish) | mhc1uba | NP_571546.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100217322 | XP_004919447.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100490896 | XP_002939001.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100496639 | XP_002940118.2 |
Xenopus tropicalis (tropical clawed frog) | mr1 | XP_002940116.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100496176 | XP_002940115.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100494130 | XP_004918993.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494930 | XP_004918997.1 |
Xenopus tropicalis (tropical clawed frog) | LOC101730341 | XP_004919000.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100490378 | XP_002938998.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100487860 | XP_002944047.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494293 | XP_002940103.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100495081 | XP_002940108.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100494456 | XP_002940104.2 |
Homo sapiens (human) | HLA-B | NP_005505.2 |
Pan troglodytes (chimpanzee) | PATR-B | NP_001009081.1 |
MAMU-B18 | NP_001108436.1 | |
Canis lupus familiaris (dog) | DLA88 | NP_001014767.1 |
Danio rerio (zebrafish) | LOC796419 | XP_001336749.4 |
Xenopus tropicalis (tropical clawed frog) | hla-a | NP_001106536.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100495868 | XP_002940113.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100490728 | XP_002939000.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100495703 | XP_002940112.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100496488 | XP_002940117.2 |
Xenopus tropicalis (tropical clawed frog) | LOC100170421 | NP_001123671.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100170569 | XP_004918999.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100495542 | XP_002940111.1 |
Xenopus tropicalis (tropical clawed frog) | LOC100485167 | XP_002935389.2 |
A novel RNAseq-assisted method for MHC class I genotyping in a non-model species applied to a lethal vaccination-induced alloimmune disease.
Demasius W, Weikard R, Hadlich F, Buitkamp J, K?hn C
BMC genomics17365(2016 05)
Non-classical major histocompatibility complex class makes a crucial contribution to reproduction in the dairy cow.
Shu L, Peng X, Zhang S, Deng G, Wu Y, He M, Li B, Li C, Zhang K
The Journal of reproduction and development58(5)569-75(2012)
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
BoLA class I allele diversity and polymorphism in a herd of cattle.
Babiuk S, Horseman B, Zhang C, Bickis M, Kusalik A, Schook LB, Abrahamsen MS, Pontarollo R
Immunogenetics59(2)167-76(2007 Feb)
Evidence for expression of both classical and non-classical major histocompatibility complex class I genes in bovine trophoblast cells.
Davies CJ, Eldridge JA, Fisher PJ, Schlafer DH
American journal of reproductive immunology (New York, N.Y. : 1989)55(3)188-200(2006 Mar)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Data suggest that BoLA-NC1 is up-regulated in first and third trimesters, but not in second trimester; study investigated expression of three non-classical major histocompatibility complex genes in peripheral mononuclear cells of pregnant cows.
Title: Non-classical major histocompatibility complex class makes a crucial contribution to reproduction in the dairy cow.
The following BOLA-NC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the BOLA-NC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa40423 | |
Clone ID Related Accession (Same CDS sequence) | NM_001105616.2 | |
Accession Version | NM_001105616.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1029bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-13 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen precursor | |
Comment | Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC109706.1. On Aug 17, 2015 this sequence version replaced NM_001105616.1. ##Evidence-Data-START## Transcript exon combination :: BC109706.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMN03145412, SAMN03145413 [ECO:0000350] ##Evidence-Data-END## |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001099086.1 |
CDS | 8..1036 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001105616.2 |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32121 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223618.3 , XM_005223618.4 | |
Accession Version | XM_005223618.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104557.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005223618.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223675.1 |
CDS | 66..1289 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223618.3 |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32121 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223618.3 , XM_005223618.4 | |
Accession Version | XM_005223618.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1224bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005223618.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223675.1 |
CDS | 90..1313 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223618.4 |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32123 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223620.4 , XM_005223620.3 | |
Accession Version | XM_005223620.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005223620.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223677.1 |
CDS | 89..1060 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223620.4 |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa32123 | |
Clone ID Related Accession (Same CDS sequence) | XM_005223620.4 , XM_005223620.3 | |
Accession Version | XM_005223620.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 972bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104557.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005223620.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005223677.1 |
CDS | 66..1037 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005223620.3 |
1 | ATGGGGCCGC GAACCCTCCT CCTGCTCCTC TTGGGGGTCC TGGTCCCCCG AGACACACGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa229456 | |
Clone ID Related Accession (Same CDS sequence) | XM_024983518.1 | |
Accession Version | XM_024983518.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1149bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTATT TCCTCACCGC CGTGTCCCGG CCCGGCCTCG GGGAGCCCCG CTTCATCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024839286.1 |
CDS | 287..1435 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024983518.1 |
1 | ATGAGGTATT TCCTCACCGC CGTGTCCCGG CCCGGCCTCG GGGAGCCCCG CTTCATCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa229457 | |
Clone ID Related Accession (Same CDS sequence) | XM_024983519.1 | |
Accession Version | XM_024983519.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 897bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | non-classical MHC class I antigen isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037350.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGAGGTATT TCCTCACCGC CGTGTCCCGG CCCGGCCTCG GGGAGCCCCG CTTCATCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024839287.1 |
CDS | 285..1181 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024983519.1 |
1 | ATGAGGTATT TCCTCACCGC CGTGTCCCGG CCCGGCCTCG GGGAGCCCCG CTTCATCACC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A novel RNAseq-assisted method for MHC class I genotyping in a non-model species applied to a lethal vaccination-induced alloimmune disease. |
Non-classical major histocompatibility complex class makes a crucial contribution to reproduction in the dairy cow. |
A whole-genome assembly of the domestic cow, Bos taurus. |
BoLA class I allele diversity and polymorphism in a herd of cattle. |
Evidence for expression of both classical and non-classical major histocompatibility complex class I genes in bovine trophoblast cells. |