gRNAs
The following COL11A1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the COL11A1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
| CloneID | OBa232488 | |
| Clone ID Related Accession (Same CDS sequence) | XM_024985040.1 | |
| Accession Version | XM_024985040.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5418bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector |  User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-06 | |
| Organism | Bos taurus(cattle) | |
| Product | collagen alpha-1(XI) chain isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037330.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_024840808.1 |
| CDS | 21..5438 |
| Translation |
Target ORF information:
Target ORF information:
|
 XM_024985040.1 |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa216126 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001166509.2 | |
| Accession Version | NM_001166509.2 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5454bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2018-05-13 | |
| Organism | Bos taurus(cattle) | |
| Product | collagen alpha-1(XI) chain | |
| Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DAAA02007697.1, DAAA02007700.1, DAAA02007702.1, AV594460.1, DAAA02007703.1, DAAA02007705.1, AV595342.1 and DAAA02007707.1. On Aug 22, 2017 this sequence version replaced NM_001166509.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMN03145443 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## inferred exon combination :: based on alignments, homology ##RefSeq-Attributes-END## | |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001159981.2 |
| CDS | 315..5768 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001166509.2 |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa44392 | |
| Clone ID Related Accession (Same CDS sequence) | NM_001166509.1 | |
| Accession Version | NM_001166509.1 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5454bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2015-01-03 | |
| Organism | Bos taurus(Cattle) | |
| Product | collagen alpha-1(XI) chain | |
| Comment | PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AAFC03024290.1, AAFC03024288.1, AAFC03024289.1 and AAFC03006709.1. On Oct 27, 2009 this sequence version replaced XM_001253222.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## RNAseq introns :: mixed/partial sample support SAMD00000728, SAMN00120237 [ECO:0000350] ##Evidence-Data-END## | |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | NP_001159981.1 |
| CDS | 314..5767 |
| Translation |
Target ORF information:
Target ORF information:
|
NM_001166509.1 |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17570 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204083.3 | |
| Accession Version | XM_005204083.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5445bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | collagen alpha-1(XI) chain isoform X2 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103868.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005204083.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005204140.1 |
| CDS | 260..5704 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005204083.3 |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| CloneID | OBa17571 | |
| Clone ID Related Accession (Same CDS sequence) | XM_005204085.3 | |
| Accession Version | XM_005204085.3 Latest version! | Documents for ORF clone product in default vector |
| Sequence Information | ORF Nucleotide Sequence (Length: 5409bp) Protein sequence SNP |
|
| Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
| Clone information | Clone Map | MSDS |
| Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
| ORF Insert Method | CloneEZ™ Seamless cloning technology | |
| Insert Structure | linear | |
| Update Date | 2016-01-25 | |
| Organism | Bos taurus(cattle) | |
| Product | collagen alpha-1(XI) chain isoform X1 | |
| Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003103868.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005204085.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## | |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
| RefSeq | XP_005204142.1 |
| CDS | 260..5668 |
| Translation |
Target ORF information:
Target ORF information:
|
XM_005204085.3 |
1 | ATGGAGCGGT GGTCCTCTAG GTGGAAAACG AAACGGTGGC TCTGGGATTT CACCATAACA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
Structural analysis of cross-linking domains in cartilage type XI collagen. Insights on polymeric assembly. |
Isolation and characterization of the chains of type V/type XI collagen present in bovine vitreous. |
Concerted modulation of alpha 1(XI) and alpha 2(V) collagen mRNAs in bovine vascular smooth muscle cells. |
