Gene Symbol | SEC1 |
Entrez Gene ID | 281483 |
Full Name | alpha-2-fucosyltransferase Sec1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
ORF » Species Summary » Bos taurus » SEC1 cDNA ORF clone
Gene Symbol | SEC1 |
Entrez Gene ID | 281483 |
Full Name | alpha-2-fucosyltransferase Sec1 |
Gene Type | protein-coding |
Organism | Bos taurus(cattle) |
mRNA | Protein | Name |
---|---|---|
XM_005219160.3 | XP_005219217.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 |
XM_005219159.3 | XP_005219216.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 |
XM_024977936.1 | XP_024833704.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 |
XM_005219156.4 | XP_005219213.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X1 |
NM_001130745.2 | NP_001124217.2 | galactoside 2-alpha-L-fucosyltransferase 3 |
XM_005219159.4 | XP_005219216.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 |
XM_005219156.3 | XP_005219213.1 | galactoside 2-alpha-L-fucosyltransferase 3 isoform X1 |
Rattus norvegicus (Norway rat) | Sec1 | NP_001129056.1 |
Mus musculus (house mouse) | Sec1 | NP_001258507.1 |
Bos taurus (cattle) | SEC1 | NP_001124217.1 |
Canis lupus familiaris (dog) | LOC102151792 | XP_005616920.1 |
A whole-genome assembly of the domestic cow, Bos taurus.
Zimin AV, Delcher AL, Florea L, Kelley DR, Schatz MC, Puiu D, Hanrahan F, Pertea G, Van Tassell CP, Sonstegard TS, Mar?ais G, Roberts M, Subramanian P, Yorke JA, Salzberg SL
Genome biology10(4)R42(2009)
A random mutagenesis approach to isolate dominant-negative yeast sec1 mutants reveals a functional role for domain 3a in yeast and mammalian Sec1/Munc18 proteins.
Boyd A, Ciufo LF, Barclay JW, Graham ME, Haynes LP, Doherty MK, Riesen M, Burgoyne RD, Morgan A
Genetics180(1)165-78(2008 Sep)
Organization of the bovine alpha 2-fucosyltransferase gene cluster suggests that the Sec1 gene might have been shaped through a nonautonomous L1-retrotransposition event within the same locus.
Saunier K, Barreaud JP, Eggen A, Oriol R, Lev?ziel H, Julien R, Petit JM
Molecular biology and evolution18(11)2083-91(2001 Nov)
Three bovine alpha2-fucosyltransferase genes encode enzymes that preferentially transfer fucose on Galbeta1-3GalNAc acceptor substrates.
Barreaud JP, Saunier K, Souchaire J, Delourme D, Oulmouden A, Oriol R, Lev?ziel H, Julien R, Petit JM
Glycobiology10(6)611-21(2000 Jun)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
determination of a functional role for domain 3a in yeast and mammalian Sec1/Munc18 proteins
Title: A random mutagenesis approach to isolate dominant-negative yeast sec1 mutants reveals a functional role for domain 3a in yeast and mammalian Sec1/Munc18 proteins.
The following SEC1 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the SEC1 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OBa28805 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219160.3 , XM_005219159.3 , XM_024977936.1 , NM_001130745.2 , XM_005219159.4 | |
Accession Version | NM_001130745.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-29 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 | |
Comment | Comment: VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from NKLS02000018.1. On Apr 14, 2016 this sequence version replaced NM_001130745.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. ##Evidence-Data-START## CDS exon combination :: AH011100.2 [ECO:0000331] RNAseq introns :: single sample supports all introns SAMN03145414, SAMN03145419 [ECO:0000348] ##Evidence-Data-END## |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001124217.2 |
CDS | 27..1133 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001130745.2 |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28804 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219156.4 , XM_005219156.3 | |
Accession Version | XM_005219156.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1365bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005219156.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGG CGAGTGCCAA GGGAGGAGAG AGAGGGGCCG GACAGGGCAG GGCTAGAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005219213.1 |
CDS | 92..1456 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005219156.4 |
1 | ATGGGGGTGG CGAGTGCCAA GGGAGGAGAG AGAGGGGCCG GACAGGGCAG GGCTAGAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28804 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219156.4 , XM_005219156.3 | |
Accession Version | XM_005219156.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1365bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104466.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005219156.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGGTGG CGAGTGCCAA GGGAGGAGAG AGAGGGGCCG GACAGGGCAG GGCTAGAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005219213.1 |
CDS | 261..1625 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005219156.3 |
1 | ATGGGGGTGG CGAGTGCCAA GGGAGGAGAG AGAGGGGCCG GACAGGGCAG GGCTAGAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28805 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219160.3 , XM_005219159.3 , XM_024977936.1 , NM_001130745.2 , XM_005219159.4 | |
Accession Version | XM_005219160.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104466.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005219160.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005219217.1 |
CDS | 142..1248 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005219160.3 |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28805 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219160.3 , XM_005219159.3 , XM_024977936.1 , NM_001130745.2 , XM_005219159.4 | |
Accession Version | XM_005219159.3 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-01-25 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003104466.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jan 26, 2016 this sequence version replaced XM_005219159.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Bos taurus Annotation Release 105 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005219216.1 |
CDS | 1150..2256 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005219159.3 |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28805 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219160.3 , XM_005219159.3 , XM_024977936.1 , NM_001130745.2 , XM_005219159.4 | |
Accession Version | XM_024977936.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_024833704.1 |
CDS | 189..1295 |
Translation |
Target ORF information:
Target ORF information:
|
XM_024977936.1 |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OBa28805 | |
Clone ID Related Accession (Same CDS sequence) | XM_005219160.3 , XM_005219159.3 , XM_024977936.1 , NM_001130745.2 , XM_005219159.4 | |
Accession Version | XM_005219159.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1107bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2018-05-06 | |
Organism | Bos taurus(cattle) | |
Product | galactoside 2-alpha-L-fucosyltransferase 3 isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_037345.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 7, 2018 this sequence version replaced XM_005219159.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bos taurus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_005219216.1 |
CDS | 1169..2275 |
Translation |
Target ORF information:
Target ORF information:
|
XM_005219159.4 |
1 | ATGTGGGACA TGAGAGCCGT TGCCCCGCAG CGGCCCGCAG CTGGACATCC CCGAGCAGGC |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
A whole-genome assembly of the domestic cow, Bos taurus. |
A random mutagenesis approach to isolate dominant-negative yeast sec1 mutants reveals a functional role for domain 3a in yeast and mammalian Sec1/Munc18 proteins. |
Organization of the bovine alpha 2-fucosyltransferase gene cluster suggests that the Sec1 gene might have been shaped through a nonautonomous L1-retrotransposition event within the same locus. |
Three bovine alpha2-fucosyltransferase genes encode enzymes that preferentially transfer fucose on Galbeta1-3GalNAc acceptor substrates. |