Gene Symbol | LHY |
Entrez Gene ID | 839341 |
Full Name | Homeodomain-like superfamily protein |
Synonyms | LATE ELONGATED HYPOCOTYL,LATE ELONGATED HYPOCOTYL 1,LHY1,T25K16.6,T25K16_6 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » LHY cDNA ORF clone
Gene Symbol | LHY |
Entrez Gene ID | 839341 |
Full Name | Homeodomain-like superfamily protein |
Synonyms | LATE ELONGATED HYPOCOTYL,LATE ELONGATED HYPOCOTYL 1,LHY1,T25K16.6,T25K16_6 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_001197953.1 | NP_001184882.1 | Homeodomain-like superfamily protein |
NM_001331247.1 | NP_001320627.1 | Homeodomain-like superfamily protein |
NM_001035847.1 | NP_001030924.1 | Homeodomain-like superfamily protein |
NM_179237.1 | NP_849568.1 | Homeodomain-like superfamily protein |
NM_001331248.1 | NP_001320629.1 | Homeodomain-like superfamily protein |
NM_001331246.1 | NP_001320628.1 | Homeodomain-like superfamily protein |
NM_001083968.1 | NP_001077437.1 | Homeodomain-like superfamily protein |
NM_099988.4 | NP_171614.1 | Homeodomain-like superfamily protein |
Oryza sativa (rice) | Os08g0157600 | NP_001061032.1 |
Arabidopsis thaliana (thale cress) | LHY | NP_001030924.1 |
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
Theologis A, Ecker JR, Palm CJ, Federspiel NA, Kaul S, White O, Alonso J, Altafi H, Araujo R, Bowman CL, Brooks SY, Buehler E, Chan A, Chao Q, Chen H, Cheuk RF, Chin CW, Chung MK, Conn L, Conway AB, Conway AR, Creasy TH, Dewar K, Dunn P, Etgu P, Feldblyum TV, Feng J, Fong B, Fujii CY, Gill JE, Goldsmith AD, Haas B, Hansen NF, Hughes B, Huizar L, Hunter JL, Jenkins J, Johnson-Hopson C, Khan S, Khaykin E, Kim CJ, Koo HL, Kremenetskaia I, Kurtz DB, Kwan A, Lam B, Langin-Hooper S, Lee A, Lee JM, Lenz CA, Li JH, Li Y, Lin X, Liu SX, Liu ZA, Luros JS, Maiti R, Marziali A, Militscher J, Miranda M, Nguyen M, Nierman WC, Osborne BI, Pai G, Peterson J, Pham PK, Rizzo M, Rooney T, Rowley D, Sakano H, Salzberg SL, Schwartz JR, Shinn P, Southwick AM, Sun H, Tallon LJ, Tambunga G, Toriumi MJ, Town CD, Utterback T, Van Aken S, Vaysberg M, Vysotskaia VS, Walker M, Wu D, Yu G, Fraser CM, Venter JC, Davis RW
Nature408(6814)816-20(2000 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
Transcriptional co-regulators PRR9, PRR7 and PRR5 inhibit morning loop LHY and CCA1 expression by binding to their promoters
Title: A Bayesian approach for parameter estimation in the extended clock gene circuit of Arabidopsis thaliana.
Histone 3 activating marks associated with the translational start sites of CCA1/LHY and TOC1 are circadian regulated.
Title: Circadian clock regulates dynamic chromatin modifications associated with Arabidopsis CCA1/LHY and TOC1 transcriptional rhythms.
Rhythmic expression of LHY under light-dark cycling conditions correlates with histone modification.
Title: Rhythmic oscillation of histone acetylation and methylation at the Arabidopsis central clock loci.
Our computational analysis suggests that TOC1 is a repressor of the morning genes Late Elongated Hypocotyl and Circadian Clock Associated1 rather than an activator as first conceived.
Title: The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops.
Interaction of Arabidopsis DET1 with LHY in mediating transcriptional repression in the plant circadian clock
Title: Interaction of Arabidopsis DET1 with CCA1 and LHY in mediating transcriptional repression in the plant circadian clock.
The following LHY gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the LHY cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb24667 | |
Clone ID Related Accession (Same CDS sequence) | NM_001331247.1 , NM_001035847.1 , NM_179237.1 , NM_001331248.1 , NM_099988.4 | |
Accession Version | NM_001331247.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001320627.1 |
CDS | 641..2578 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001331247.1 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb24667 | |
Clone ID Related Accession (Same CDS sequence) | NM_001331247.1 , NM_001035847.1 , NM_179237.1 , NM_001331248.1 , NM_099988.4 | |
Accession Version | NM_001035847.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001030924.1 |
CDS | 358..2295 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001035847.1 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb24667 | |
Clone ID Related Accession (Same CDS sequence) | NM_001331247.1 , NM_001035847.1 , NM_179237.1 , NM_001331248.1 , NM_099988.4 | |
Accession Version | NM_179237.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_849568.1 |
CDS | 551..2488 |
Translation |
Target ORF information:
Target ORF information:
|
NM_179237.1 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb24667 | |
Clone ID Related Accession (Same CDS sequence) | NM_001331247.1 , NM_001035847.1 , NM_179237.1 , NM_001331248.1 , NM_099988.4 | |
Accession Version | NM_001331248.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001320629.1 |
CDS | 170..2107 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001331248.1 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb24667 | |
Clone ID Related Accession (Same CDS sequence) | NM_001331247.1 , NM_001035847.1 , NM_179237.1 , NM_001331248.1 , NM_099988.4 | |
Accession Version | NM_099988.4 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). On Sep 12, 2016 this sequence version replaced NM_099988.3. |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_171614.1 |
CDS | 441..2378 |
Translation |
Target ORF information:
Target ORF information:
|
NM_099988.4 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb24668 | |
Clone ID Related Accession (Same CDS sequence) | NM_001083968.1 | |
Accession Version | NM_001083968.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1935bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001077437.1 |
CDS | 381..2315 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001083968.1 |
1 | ATGGATACTA ATACATCTGG AGAAGAATTA TTAGCTAAGG CAAGAAAGCC ATATACAATA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb30278 | |
Clone ID Related Accession (Same CDS sequence) | NM_001197953.1 , NM_001331246.1 | |
Accession Version | NM_001197953.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1932bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGAAGAGC TTGGCAACGA ATTGAAGAAC ATATTGGGAC AAAGACTGCT GTTCAGATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001184882.1 |
CDS | 766..2697 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001197953.1 |
1 | ATGGAAGAGC TTGGCAACGA ATTGAAGAAC ATATTGGGAC AAAGACTGCT GTTCAGATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OAb30278 | |
Clone ID Related Accession (Same CDS sequence) | NM_001197953.1 , NM_001331246.1 | |
Accession Version | NM_001331246.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1932bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Homeodomain-like superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003070). |
1 | ATGGAAGAGC TTGGCAACGA ATTGAAGAAC ATATTGGGAC AAAGACTGCT GTTCAGATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_001320628.1 |
CDS | 766..2697 |
Translation |
Target ORF information:
Target ORF information:
|
NM_001331246.1 |
1 | ATGGAAGAGC TTGGCAACGA ATTGAAGAAC ATATTGGGAC AAAGACTGCT GTTCAGATCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. |