ORF » Species Summary » Arabidopsis thaliana » AT5G56960 cDNA ORF clone

AT5G56960 cDNA ORF clone, Arabidopsis thaliana(thale cress)

The following AT5G56960 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT5G56960 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID Accession No. Definition **Vector *Turnaround time Price (USD) Select
OAb21638 NM_125078.2
Latest version!		 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), partial mRNA. pcDNA3.1-C-(k)DYK or customized vector 7-9 $258.30
$369.00
OAb41972 NM_001345225.1
Latest version!		 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), mRNA. pcDNA3.1-C-(k)DYK or customized vector 14-16 $342.30
$489.00

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** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

  • Reference Sequences (Refseq)
    AT5G56960 ( NM_125078.2 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_200506.1 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), partial mRNA.
    Price & Availability↑
    CloneID OAb21638
    Clone ID Related Accession (Same CDS sequence) NM_125078.2
    Accession Version NM_125078.2 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1401bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product basic helix-loop-helix (bHLH) DNA-binding family protein
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). On Sep 12, 2016 this sequence version replaced NM_125078.1. COMPLETENESS: incomplete on the 5' end. 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGATGCATT TGATTTTGAG CTGCAGCTAT TTAATATCAA TGGATGGATA TTACAATGAA 
    GCTTCTGAAG AACCTTCTTC GTCTTCTTCT TCTGGAAGTT TAGCTAGGAG CTTGTTCCAT 
    GAGTATCGCC AATCCGTTAT CCCGCTCCAA AATGGGCATG TGCCAAGCAT GGCGTTCATG 
    AACAATCTTC CATACGTAGA AATTCGACCA CAAGAGAGTC AAAGACTTGC TTTTAACGAC 
    ACACAACGTC TCTTCTATCA GATGAAAATT GAAGCAAGTC TTCGAGAATG GTTCCCTGAA 
    GATTTCAATA GAAAGTCTTC TCCGGCAAAC TCCGATTATC TCCGGCCACC TCATTATCCC 
    TCTTCATCGT CTTCTTCTCT TAGTCCCAAC AACATCTCCG AATATTCCTC TCTTTTGTTC 
    CCACTCATCC CTAAACCTTC AACGACGACT GAGGCCGTTA ACGTTCCGGT ACTTCCACCG 
    CTAGCTCCGA TCAATATGAT CCATCCACAG CATCAAGAGC CTTTATTCCG TAACCGTCAA 
    CGTGAGGAAG AAGCAATGAC GCAAGCAATC TTAGCGGTTT TAACGGGGCC ATCAAGTCCT 
    CCGTCAACTT CTTCCTCGCC GCAGCGTAAA GGAAGAGCCA CCGCTTTTAA GAGATATTAC 
    TCCATGATTA GTGACCGCGG TAGAGCCCCG CTTCCGAGTG TTCGGAAGCA AAGTATGATG 
    ACAAGAGCGA TGTCCTTCTA CAATAGGCTT AACATTAACC AGAGAGAGCG TTTTACTAGG 
    GAAAACGCTA CTACACACGG CGAGGGAAGC GGTGGAAGTG GAGGGGGTGG ACGTTATACT 
    AGCGGGCCAA GCGCAACGCA ACTGCAACAT ATGATATCGG AGAGGAAACG GCGAGAGAAG 
    CTTAATGAGA GCTTTCAAGC ATTGAGATCT CTCCTTCCTC CCGGAACTAA GAAAGATAAA 
    GCATCGGTCC TCTCCATTGC AAGAGAGCAA CTATCTTCTT TGCAAGGTGA GATTTCGAAA 
    CTACTAGAGA GAAATCGGGA GGTAGAGGCA AAGCTAGCAG GAGAAAGAGA GATTGAAAAT 
    GATTTACGAC CCGAAGAGAG GTTTAACGTT CGTATAAGAC ATATACCTGA ATCAACATCT 
    AGAGAGAGGA CTTTGGATCT ACGAGTTGTT CTAAGGGGAG ACATCATTAG GGTTGATGAT 
    TTGATGATAA GACTTCTCGA ATTCTTGAAG CAAATCAACA ATGTGAGCTT AGTGTCAATC 
    GAAGCTCGAA CTCTAGCTAG AGCAGAGGGG GATACTTCAA TTGTTCTTGT GATCAGCTTA 
    AGGCTCAAGA TTGAGGGTGA ATGGGACGAA TCAGCCTTCC AAGAAGCAGT CAGAAGGGTT 
    GTTGCTGACT TGGCTCACTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_200506.1
    CDS1..1401
    Translation

    Target ORF information:

    RefSeq Version NM_125078.2
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), partial mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_125078.2

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGATGCATT TGATTTTGAG CTGCAGCTAT TTAATATCAA TGGATGGATA TTACAATGAA 
    GCTTCTGAAG AACCTTCTTC GTCTTCTTCT TCTGGAAGTT TAGCTAGGAG CTTGTTCCAT 
    GAGTATCGCC AATCCGTTAT CCCGCTCCAA AATGGGCATG TGCCAAGCAT GGCGTTCATG 
    AACAATCTTC CATACGTAGA AATTCGACCA CAAGAGAGTC AAAGACTTGC TTTTAACGAC 
    ACACAACGTC TCTTCTATCA GATGAAAATT GAAGCAAGTC TTCGAGAATG GTTCCCTGAA 
    GATTTCAATA GAAAGTCTTC TCCGGCAAAC TCCGATTATC TCCGGCCACC TCATTATCCC 
    TCTTCATCGT CTTCTTCTCT TAGTCCCAAC AACATCTCCG AATATTCCTC TCTTTTGTTC 
    CCACTCATCC CTAAACCTTC AACGACGACT GAGGCCGTTA ACGTTCCGGT ACTTCCACCG 
    CTAGCTCCGA TCAATATGAT CCATCCACAG CATCAAGAGC CTTTATTCCG TAACCGTCAA 
    CGTGAGGAAG AAGCAATGAC GCAAGCAATC TTAGCGGTTT TAACGGGGCC ATCAAGTCCT 
    CCGTCAACTT CTTCCTCGCC GCAGCGTAAA GGAAGAGCCA CCGCTTTTAA GAGATATTAC 
    TCCATGATTA GTGACCGCGG TAGAGCCCCG CTTCCGAGTG TTCGGAAGCA AAGTATGATG 
    ACAAGAGCGA TGTCCTTCTA CAATAGGCTT AACATTAACC AGAGAGAGCG TTTTACTAGG 
    GAAAACGCTA CTACACACGG CGAGGGAAGC GGTGGAAGTG GAGGGGGTGG ACGTTATACT 
    AGCGGGCCAA GCGCAACGCA ACTGCAACAT ATGATATCGG AGAGGAAACG GCGAGAGAAG 
    CTTAATGAGA GCTTTCAAGC ATTGAGATCT CTCCTTCCTC CCGGAACTAA GAAAGATAAA 
    GCATCGGTCC TCTCCATTGC AAGAGAGCAA CTATCTTCTT TGCAAGGTGA GATTTCGAAA 
    CTACTAGAGA GAAATCGGGA GGTAGAGGCA AAGCTAGCAG GAGAAAGAGA GATTGAAAAT 
    GATTTACGAC CCGAAGAGAG GTTTAACGTT CGTATAAGAC ATATACCTGA ATCAACATCT 
    AGAGAGAGGA CTTTGGATCT ACGAGTTGTT CTAAGGGGAG ACATCATTAG GGTTGATGAT 
    TTGATGATAA GACTTCTCGA ATTCTTGAAG CAAATCAACA ATGTGAGCTT AGTGTCAATC 
    GAAGCTCGAA CTCTAGCTAG AGCAGAGGGG GATACTTCAA TTGTTCTTGT GATCAGCTTA 
    AGGCTCAAGA TTGAGGGTGA ATGGGACGAA TCAGCCTTCC AAGAAGCAGT CAGAAGGGTT 
    GTTGCTGACT TGGCTCACTG A

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    AT5G56960 ( NM_001345225.1 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_001330357.1 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), mRNA.
    Price & Availability↑
    CloneID OAb41972
    Clone ID Related Accession (Same CDS sequence) NM_001345225.1
    Accession Version NM_001345225.1 Latest version! Documents for ORF clone product in default vector
    Sequence Information ORF Nucleotide Sequence (Length: 1578bp)
    Protein sequence
    SNP
    Vector pcDNA3.1-C-(k)DYK or customized vector User Manual
    Clone information Clone Map MSDS
    Tag on pcDNA3.1+/C-(K)DYK C terminal DYKDDDDK tags
    ORF Insert Method CloneEZ™ Seamless cloning technology
    Insert Structure linear
    Update Date 2019-02-13
    Organism Arabidopsis thaliana(thale cress)
    Product basic helix-loop-helix (bHLH) DNA-binding family protein
    Comment Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003076). 

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATGCAT TCTTCTTAAC GGATGATCCC AATACCCGGA ACCAGTTAAT CCGGTCGCTA 
    GCTCAATCTT TTGGATGTGT TTACGTTTGT CTTTGGTCTT ACTATTTTCC TCGACCTTCT 
    AACTATTTAA TATCAATGGA TGGATATTAC AATGAAGCTT CTGAAGAACC TTCTTCGTCT 
    TCTTCTTCTG GAAGTTTAGC TAGGAGCTTG TTCCATGAGT ATCGCCAATC CGTTATCCCG 
    CTCCAAAATG GGCATGTGCC AAGCATGGCG TTCATGAACA ATCTTCCATA CGTAGAAATT 
    CGACCACAAG AGAGTCAAAG ACTTGCTTTT AACGACACAC AACGTCTCTT CTATCAGGAA 
    GCCAGGATTC AGACGGTGAT ATTCATGGGT TGCCGGAGCG GCGAGATCGA ACTCGGAATG 
    ACGTATGATA CTACAAATAT GAAAATTGAA GCAAGTCTTC GAGAATGGTT CCCTGAAGAT 
    TTCAATAGAA AGTCTTCTCC GGCAAACTCC GATTATCTCC GGCCACCTCA TTATCCCTCT 
    TCATCGTCTT CTTCTCTTAG TCCCAACAAC ATCTCCGAAT ATTCCTCTCT TTTGTTCCCA 
    CTCATCCCTA AACCTTCAAC GACGACTGAG GCCGTTAACG TTCCGGTACT TCCACCGCTA 
    GCTCCGATCA ATATGATCCA TCCACAGCAT CAAGAGCCTT TATTCCGTAA CCGTCAACGT 
    GAGGAAGAAG CAATGACGCA AGCAATCTTA GCGGTTTTAA CGGGGCCATC AAGTCCTCCG 
    TCAACTTCTT CCTCGCCGCA GCGTAAAGGA AGAGCCACCG CTTTTAAGAG ATATTACTCC 
    ATGATTAGTG ACCGCGGTAG AGCCCCGCTT CCGAGTGTTC GGAAGCAAAG TATGATGACA 
    AGAGCGATGT CCTTCTACAA TAGGCTTAAC ATTAACCAGA GAGAGCGTTT TACTAGGGAA 
    AACGCTACTA CACACGGCGA GGGAAGCGGT GGAAGTGGAG GGGGTGGACG TTATACTAGC 
    GGGCCAAGCG CAACGCAACT GCAACATATG ATATCGGAGA GGAAACGGCG AGAGAAGCTT 
    AATGAGAGCT TTCAAGCATT GAGATCTCTC CTTCCTCCCG GAACTAAGAA AGATAAAGCA 
    TCGGTCCTCT CCATTGCAAG AGAGCAACTA TCTTCTTTGC AAGGTGAGAT TTCGAAACTA 
    CTAGAGAGAA ATCGGGAGGT AGAGGCAAAG CTAGCAGGAG AAAGAGAGAT TGAAAATGAT 
    TTACGACCCG AAGAGAGGTT TAACGTTCGT ATAAGACATA TACCTGAATC AACATCTAGA 
    GAGAGGACTT TGGATCTACG AGTTGTTCTA AGGGGAGACA TCATTAGGGT TGATGATTTG 
    ATGATAAGAC TTCTCGAATT CTTGAAGCAA ATCAACAATG TGAGCTTAGT GTCAATCGAA 
    GCTCGAACTC TAGCTAGAGC AGAGGGGGAT ACTTCAATTG TTCTTGTGAT CAGCTTAAGG 
    CTCAAGATTG AGGGTGAATG GGACGAATCA GCCTTCCAAG AAGCAGTCAG AAGGGTTGTT 
    GCTGACTTGG CTCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

    RefSeq NP_001330357.1
    CDS208..1785
    Translation

    Target ORF information:

    RefSeq Version NM_001345225.1
    Organism Arabidopsis thaliana(thale cress)
    Definition Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding family protein (AT5G56960), mRNA.

    Target ORF information:

    Epitope DYKDDDDK
    Bacterial selection AMPR
    Mammalian selection NeoR
    Vector pcDNA3.1+/C-(K)DYK
    		 NM_001345225.1

    ORF Insert Sequence:

    1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    ATGGATGCAT TCTTCTTAAC GGATGATCCC AATACCCGGA ACCAGTTAAT CCGGTCGCTA 
    GCTCAATCTT TTGGATGTGT TTACGTTTGT CTTTGGTCTT ACTATTTTCC TCGACCTTCT 
    AACTATTTAA TATCAATGGA TGGATATTAC AATGAAGCTT CTGAAGAACC TTCTTCGTCT 
    TCTTCTTCTG GAAGTTTAGC TAGGAGCTTG TTCCATGAGT ATCGCCAATC CGTTATCCCG 
    CTCCAAAATG GGCATGTGCC AAGCATGGCG TTCATGAACA ATCTTCCATA CGTAGAAATT 
    CGACCACAAG AGAGTCAAAG ACTTGCTTTT AACGACACAC AACGTCTCTT CTATCAGGAA 
    GCCAGGATTC AGACGGTGAT ATTCATGGGT TGCCGGAGCG GCGAGATCGA ACTCGGAATG 
    ACGTATGATA CTACAAATAT GAAAATTGAA GCAAGTCTTC GAGAATGGTT CCCTGAAGAT 
    TTCAATAGAA AGTCTTCTCC GGCAAACTCC GATTATCTCC GGCCACCTCA TTATCCCTCT 
    TCATCGTCTT CTTCTCTTAG TCCCAACAAC ATCTCCGAAT ATTCCTCTCT TTTGTTCCCA 
    CTCATCCCTA AACCTTCAAC GACGACTGAG GCCGTTAACG TTCCGGTACT TCCACCGCTA 
    GCTCCGATCA ATATGATCCA TCCACAGCAT CAAGAGCCTT TATTCCGTAA CCGTCAACGT 
    GAGGAAGAAG CAATGACGCA AGCAATCTTA GCGGTTTTAA CGGGGCCATC AAGTCCTCCG 
    TCAACTTCTT CCTCGCCGCA GCGTAAAGGA AGAGCCACCG CTTTTAAGAG ATATTACTCC 
    ATGATTAGTG ACCGCGGTAG AGCCCCGCTT CCGAGTGTTC GGAAGCAAAG TATGATGACA 
    AGAGCGATGT CCTTCTACAA TAGGCTTAAC ATTAACCAGA GAGAGCGTTT TACTAGGGAA 
    AACGCTACTA CACACGGCGA GGGAAGCGGT GGAAGTGGAG GGGGTGGACG TTATACTAGC 
    GGGCCAAGCG CAACGCAACT GCAACATATG ATATCGGAGA GGAAACGGCG AGAGAAGCTT 
    AATGAGAGCT TTCAAGCATT GAGATCTCTC CTTCCTCCCG GAACTAAGAA AGATAAAGCA 
    TCGGTCCTCT CCATTGCAAG AGAGCAACTA TCTTCTTTGC AAGGTGAGAT TTCGAAACTA 
    CTAGAGAGAA ATCGGGAGGT AGAGGCAAAG CTAGCAGGAG AAAGAGAGAT TGAAAATGAT 
    TTACGACCCG AAGAGAGGTT TAACGTTCGT ATAAGACATA TACCTGAATC AACATCTAGA 
    GAGAGGACTT TGGATCTACG AGTTGTTCTA AGGGGAGACA TCATTAGGGT TGATGATTTG 
    ATGATAAGAC TTCTCGAATT CTTGAAGCAA ATCAACAATG TGAGCTTAGT GTCAATCGAA 
    GCTCGAACTC TAGCTAGAGC AGAGGGGGAT ACTTCAATTG TTCTTGTGAT CAGCTTAAGG 
    CTCAAGATTG AGGGTGAATG GGACGAATCA GCCTTCCAAG AAGCAGTCAG AAGGGTTGTT 
    GCTGACTTGG CTCACTGA

    The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.

  • PubMed

    Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
    Nature408(6814)823-6(2000 Dec)
    Tabata S,Kaneko T,Nakamura Y,Kotani H,Kato T,Asamizu E,Miyajima N,Sasamoto S,Kimura T,Hosouchi T,Kawashima K,Kohara M,Matsumoto M,Matsuno A,Muraki A,Nakayama S,Nakazaki N,Naruo K,Okumura S,Shinpo S,Takeuchi C,Wada T,Watanabe A,Yamada M,Yasuda M,Sato S,de la Bastide M,Huang E,Spiegel L,Gnoj L,O'Shaughnessy A,Preston R,Habermann K,Murray J,Johnson D,Rohlfing T,Nelson J,Stoneking T,Pepin K,Spieth J,Sekhon M,Armstrong J,Becker M,Belter E,Cordum H,Cordes M,Courtney L,Courtney W,Dante M,Du H,Edwards J,Fryman J,Haakensen B,Lamar E,Latreille P,Leonard S,Meyer R,Mulvaney E,Ozersky P,Riley A,Strowmatt C,Wagner-McPherson C,Wollam A,Yoakum M,Bell M,Dedhia N,Parnell L,Shah R,Rodriguez M,See LH,Vil D,Baker J,Kirchoff K,Toth K,King L,Bahret A,Miller B,Marra M,Martienssen R,McCombie WR,Wilson RK,Murphy G,Bancroft I,Volckaert G,Wambutt R,D?sterh?ft A,Stiekema W,Pohl T,Entian KD,Terryn N,Hartley N,Bent E,Johnson S,Langham SA,McCullagh B,Robben J,Grymonprez B,Zimmermann W,Ramsperger U,Wedler H,Balke K,Wedler E,Peters S,van Staveren M,Dirkse W,Mooijman P,Lankhorst RK,Weitzenegger T,Bothe G,Rose M,Hauf J,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Villarroel R,Gielen J,Ardiles W,Bents O,Lemcke K,Kolesov G,Mayer K,Rudd S,Schoof H,Schueller C,Zaccaria P,Mewes HW,Bevan M,Fransz P,,,


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