AT4G33400 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene
Clones
gRNAs

Summary

Gene Symbol	AT4G33400
Entrez Gene ID	829477
Full Name	Vacuolar import/degradation, Vid27-related protein
Synonyms	F17M5.160,F17M5_160
Gene Type	protein-coding
Organism	Arabidopsis thaliana(thale cress)

mRNA and Protein(s)

mRNA	Protein	Name
NM_119494.4	NP_195066.1	Vacuolar import/degradation, Vid27-related protein

Pathways from BioSystems

Homologies

Arabidopsis thaliana (thale cress)	AT3G19240	NP_188555.1
Oryza sativa (rice)	Os02g0178500	NP_001046077.1
Oryza sativa (rice)	Os02g0789600	NP_001048353.1
Arabidopsis thaliana (thale cress)	AT4G33400	NP_195066.1

Gene Ontology
Bibliography

Related articles in PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Mayer K, Sch?ller C, Wambutt R, Murphy G, Volckaert G, Pohl T, D?sterh?ft A, Stiekema W, Entian KD, Terryn N, Harris B, Ansorge W, Brandt P, Grivell L, Rieger M, Weichselgartner M, de Simone V, Obermaier B, Mache R, M?ller M, Kreis M, Delseny M, Puigdomenech P, Watson M, Schmidtheini T, Reichert B, Portatelle D, Perez-Alonso M, Boutry M, Bancroft I, Vos P, Hoheisel J, Zimmermann W, Wedler H, Ridley P, Langham SA, McCullagh B, Bilham L, Robben J, Van der Schueren J, Grymonprez B, Chuang YJ, Vandenbussche F, Braeken M, Weltjens I, Voet M, Bastiaens I, Aert R, Defoor E, Weitzenegger T, Bothe G, Ramsperger U, Hilbert H, Braun M, Holzer E, Brandt A, Peters S, van Staveren M, Dirske W, Mooijman P, Klein Lankhorst R, Rose M, Hauf J, K?tter P, Berneiser S, Hempel S, Feldpausch M, Lamberth S, Van den Daele H, De Keyser A, Buysshaert C, Gielen J, Villarroel R, De Clercq R, Van Montagu M, Rogers J, Cronin A, Quail M, Bray-Allen S, Clark L, Doggett J, Hall S, Kay M, Lennard N, McLay K, Mayes R, Pettett A, Rajandream MA, Lyne M, Benes V, Rechmann S, Borkova D, Bl?cker H, Scharfe M, Grimm M, L?hnert TH, Dose S, de Haan M, Maarse A, Sch?fer M, M?ller-Auer S, Gabel C, Fuchs M, Fartmann B, Granderath K, Dauner D, Herzl A, Neumann S, Argiriou A, Vitale D, Liguori R, Piravandi E, Massenet O, Quigley F, Clabauld G, M?ndlein A, Felber R, Schnabl S, Hiller R, Schmidt W, Lecharny A, Aubourg S, Chefdor F, Cooke R, Berger C, Montfort A, Casacuberta E, Gibbons T, Weber N, Vandenbol M, Bargues M, Terol J, Torres A, Perez-Perez A, Purnelle B, Bent E, Johnson S, Tacon D, Jesse T, Heijnen L, Schwarz S, Scholler P, Heber S, Francs P, Bielke C, Frishman D, Haase D, Lemcke K, Mewes HW, Stocker S, Zaccaria P, Bevan M, Wilson RK, de la Bastide M, Habermann K, Parnell L, Dedhia N, Gnoj L, Schutz K, Huang E, Spiegel L, Sehkon M, Murray J, Sheet P, Cordes M, Abu-Threideh J, Stoneking T, Kalicki J, Graves T, Harmon G, Edwards J, Latreille P, Courtney L, Cloud J, Abbott A, Scott K, Johnson D, Minx P, Bentley D, Fulton B, Miller N, Greco T, Kemp K, Kramer J, Fulton L, Mardis E, Dante M, Pepin K, Hillier L, Nelson J, Spieth J, Ryan E, Andrews S, Geisel C, Layman D, Du H, Ali J, Berghoff A, Jones K, Drone K, Cotton M, Joshu C, Antonoiu B, Zidanic M, Strong C, Sun H, Lamar B, Yordan C, Ma P, Zhong J, Preston R, Vil D, Shekher M, Matero A, Shah R, Swaby IK, O'Shaughnessy A, Rodriguez M, Hoffmann J, Till S, Granat S, Shohdy N, Hasegawa A, Hameed A, Lodhi M, Johnson A, Chen E, Marra M, Martienssen R, McCombie WR
Nature402(6763)769-77(1999 Dec)

GeneRIFs: Gene References Into Functions What's a GeneRIF?

The following AT4G33400 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the AT4G33400 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1⁺/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.

***CloneID	Accession No.	Definition	**Vector	*Turnaround time	Price (USD)	Select
OAb17062	NM_119494.4 Latest version!	Arabidopsis thaliana Vacuolar import/degradation, Vid27-related protein (AT4G33400), mRNA.	pcDNA3.1-C-(k)DYK or customized vector	7-9	$342.30 $489.00

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** You may select a custom vector to replace pcDNA3.1+/C-(K)DYK after clone is added to cart.

** GenScript guarantees 100% sequence accuracy of all synthetic DNA constructs we deliver, but we do not guarantee protein expression in your experimental system. Protein expression is influenced by many factors that may vary between experiments or laboratories. In addition, please pay attention to the signal peptide, propeptide and transit peptide in target ORF, which may affect the choice of vector (N/C terminal tag vector).

***One clone ID might be correlated to multiple accession numbers, which share the same CDS sequence.

Reference Sequences (Refseq)

AT4G33400 ( NM_119494.4 ) cDNA ORF clone, Arabidopsis thaliana(thale cress) -> NP_195066.1 Arabidopsis thaliana Vacuolar import/degradation, Vid27-related protein (AT4G33400), mRNA.

Price & Availability↑

CloneID	OAb17062
Clone ID Related Accession (Same CDS sequence)	NM_119494.4
Accession Version	NM_119494.4 Latest version!	Documents for ORF clone product in default vector
Sequence Information	ORF Nucleotide Sequence (Length: 1938bp) Protein sequence SNP
Vector	pcDNA3.1-C-(k)DYK or customized vector	User Manual
Clone information	Clone Map	MSDS
Tag on pcDNA3.1⁺/C-(K)DYK	C terminal DYKDDDDK tags
ORF Insert Method	CloneEZ™ Seamless cloning technology
Insert Structure	linear
Update Date	2019-02-13
Organism	Arabidopsis thaliana(thale cress)
Product	Vacuolar import/degradation, Vid27-related protein
Comment	Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003075). On Sep 12, 2016 this sequence version replaced NM_119494.3.

ATGGGAGCAT CTCACAGTCA TGAAGATCTA GAGATCTGTT CCTCCGATGA AGATGAATAT 
GAAGAATATG AAGAAGGAAG AGAGGGAGAG GAAGAGGAAG AGACGTTTCA GGACTCGCGG 
GATGATACGT TAGGTATATC TTCCTCCGGT GGTCGTCGTC TCCGGCCTAA ATCTCCTTCA 
TCATCACTCG ACGACGTTGA GGCAAAACTC CAAGCCCTGA AGCTGAAATA CCCATTGACG 
CAATCAGCCC CGTCTACTCA GAACTCAGCT CGGCTTTTCC GCTACATCAA TGGCAACACT 
CCCAAAGCCA AATGGGTCAC AGCTGAGAAA CTGACTGCTT ATTGTTTCGT CAAGACTAAC 
AAAGGAGATG AAGATGATGA AGACGACGAT GAGAACGGAG ATGTGGAAAA CGAATGGTGG 
ATTTTGAAAG TCGGAAGCAA GATCCGTGAA AAGGTATCAG ATGAAATGCA ATTGAAAGCT 
TATAAAGATC AACGCCGTGT TGATTTCGTT GCTAAAGCTG TTTGGGCTAT GAAATTCGCC 
AGCAGTGAAG ATTTTTCGGT TTTTGTAAGC AGCTATAACA ATTGCTTGTT TGAGAACAAT 
CATGGTGTTG AGTTTAATGA GGCTAACAAG GCAAAAATCT ATGGGAAAGA TTTCATTGGG 
TGGGCTAATC CTGAAGCTGC TGATGATTCC ATGTGGGAAG ATGCTGATGA TATTTTGCTT 
CAAAGCCCAG GAGGAGGATC TGCAACTCCG GCTAGAGATA CACAGGATTT GACTGAGGCC 
TTTGAAGAAG CTACAAGTGA GGGCATACAT AGCTTAGCTC TAGGTGCTTT AGATAATAGC 
TTTCTAGTTG GAGATTCTGG TATTCAGGTT TTCAAGAACA TGAGACAGGG GATTCAAGGG 
AAAGGTGTTT GTGTTAACTT TGAGCCTGGT TATGGTCGAA CTCATTCTTC AGCACCGAAG 
AAGGCTCTTC TCATGAGAGC TGAGACTAAT ATGCTGCTCA TGAGTCCTAT GAGCCAAACG 
CCTCATTCAC GAGGTATCCA TCAGCTTGAC ATTGAAACCG GGAAAATTAT TTCAGAGTGG 
AAGTTTGAGA AAGATGGAGT GGATATCTCT ATGAGTGACA TTACTAATGA TGGTAAAGGT 
GCTCAATTGG ATCCATCTGC GTCAACGTTT CTTGGTCTGG ATAACAATAG GCTTTGCAGG 
TGGGATATGC GTGACCGATA TGGGATGGTT CAGGATCTTG CTACTGCGAA TACTCCAGTC 
TTGAATTGGG CACAGGGGCA TCAGTTTTCT AGAGGGACTA ACTTTCAGTG CTTTGCAACT 
ACTGGTGATG GCTCAATTGT TGTTGGCTCT CTTGATGGCA AAATTAGACT CTACTCGAGC 
AACACTATGA GGCAGGCAAA GACGGCTTTC CCTGGACTTG GTGCACCTGT TACTCATGTG 
GATGCTACAT TCGATGGGAA ATGGATTGTT GGTACAACTG ACACATATTT GATTGTTATC 
TGTACCCTTT TCACTGACAA AAGTGGCAAA ACAAAGACCG GCTTCGAGGG TCGCATGGGA 
AATAAGATTG CCGCACCAAG GTTGCTTAAG TTGAGGCCTC TTGATGCACA TTTAGCTGGA 
TCTGACAACA AGTTCCGCAA TGCTCAGTTT TCTTGGGTCA CGGAGGATGG GAAACAGGAG 
CGTCATGTGG TAGCTACTGT TGGCAAGTTC AGTGTGATAT GGAACTTTCA GCAGGTGAAG 
AATGGATCTC ATGAATGCTA CCATGATCAG GAAGGGCTGA AGAAATGCTA CTGCTACAAG 
ATAGTCCTTC GAAATGAATC TATAGTGGAC AGTCGCTTCA TGAATGACAA CTTTGCAATC 
TCTGGTTCAC CTGAAGCGCC TTTGGTCATT GCAACGCCTA TGAAAGTCAG CTCTTTCAGC 
TTATCCAGCA AGCGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

RefSeq	NP_195066.1
CDS	312..2249
Translation	MGASHSHEDLEICSSDEDEYEEYEEGREGEEEEETFQDSRDDTLGISSSGGRRLRPKSPSSSLDDVEAKLQALKLKYPLTQSAPSTQNSARLFRYINGNTPKAKWVTAEKLTAYCFVKTNKGDEDDEDDDENGDVENEWWILKVGSKIREKVSDEMQLKAYKDQRRVDFVAKAVWAMKFASSEDFSVFVSSYNNCLFENNHGVEFNEANKAKIYGKDFIGWANPEAADDSMWEDADDILLQSPGGGSATPARDTQDLTEAFEEATSEGIHSLALGALDNSFLVGDSGIQVFKNMRQGIQGKGVCVNFEPGYGRTHSSAPKKALLMRAETNMLLMSPMSQTPHSRGIHQLDIETGKIISEWKFEKDGVDISMSDITNDGKGAQLDPSASTFLGLDNNRLCRWDMRDRYGMVQDLATANTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSSNTMRQAKTAFPGLGAPVTHVDATFDGKWIVGTTDTYLIVICTLFTDKSGKTKTGFEGRMGNKIAAPRLLKLRPLDAHLAGSDNKFRNAQFSWVTEDGKQERHVVATVGKFSVIWNFQQVKNGSHECYHDQEGLKKCYCYKIVLRNESIVDSRFMNDNFAISGSPEAPLVIATPMKVSSFSLSSKR

Target ORF information:

RefSeq Version	NM_119494.4
Organism	Arabidopsis thaliana(thale cress)
Definition	Arabidopsis thaliana Vacuolar import/degradation, Vid27-related protein (AT4G33400), mRNA.

Target ORF information:

Epitope	DYKDDDDK
Bacterial selection	AMP^R
Mammalian selection	Neo^R
Vector	pcDNA3.1⁺/C-(K)DYK

NM_119494.4

ORF Insert Sequence:

ATGGGAGCAT CTCACAGTCA TGAAGATCTA GAGATCTGTT CCTCCGATGA AGATGAATAT 
GAAGAATATG AAGAAGGAAG AGAGGGAGAG GAAGAGGAAG AGACGTTTCA GGACTCGCGG 
GATGATACGT TAGGTATATC TTCCTCCGGT GGTCGTCGTC TCCGGCCTAA ATCTCCTTCA 
TCATCACTCG ACGACGTTGA GGCAAAACTC CAAGCCCTGA AGCTGAAATA CCCATTGACG 
CAATCAGCCC CGTCTACTCA GAACTCAGCT CGGCTTTTCC GCTACATCAA TGGCAACACT 
CCCAAAGCCA AATGGGTCAC AGCTGAGAAA CTGACTGCTT ATTGTTTCGT CAAGACTAAC 
AAAGGAGATG AAGATGATGA AGACGACGAT GAGAACGGAG ATGTGGAAAA CGAATGGTGG 
ATTTTGAAAG TCGGAAGCAA GATCCGTGAA AAGGTATCAG ATGAAATGCA ATTGAAAGCT 
TATAAAGATC AACGCCGTGT TGATTTCGTT GCTAAAGCTG TTTGGGCTAT GAAATTCGCC 
AGCAGTGAAG ATTTTTCGGT TTTTGTAAGC AGCTATAACA ATTGCTTGTT TGAGAACAAT 
CATGGTGTTG AGTTTAATGA GGCTAACAAG GCAAAAATCT ATGGGAAAGA TTTCATTGGG 
TGGGCTAATC CTGAAGCTGC TGATGATTCC ATGTGGGAAG ATGCTGATGA TATTTTGCTT 
CAAAGCCCAG GAGGAGGATC TGCAACTCCG GCTAGAGATA CACAGGATTT GACTGAGGCC 
TTTGAAGAAG CTACAAGTGA GGGCATACAT AGCTTAGCTC TAGGTGCTTT AGATAATAGC 
TTTCTAGTTG GAGATTCTGG TATTCAGGTT TTCAAGAACA TGAGACAGGG GATTCAAGGG 
AAAGGTGTTT GTGTTAACTT TGAGCCTGGT TATGGTCGAA CTCATTCTTC AGCACCGAAG 
AAGGCTCTTC TCATGAGAGC TGAGACTAAT ATGCTGCTCA TGAGTCCTAT GAGCCAAACG 
CCTCATTCAC GAGGTATCCA TCAGCTTGAC ATTGAAACCG GGAAAATTAT TTCAGAGTGG 
AAGTTTGAGA AAGATGGAGT GGATATCTCT ATGAGTGACA TTACTAATGA TGGTAAAGGT 
GCTCAATTGG ATCCATCTGC GTCAACGTTT CTTGGTCTGG ATAACAATAG GCTTTGCAGG 
TGGGATATGC GTGACCGATA TGGGATGGTT CAGGATCTTG CTACTGCGAA TACTCCAGTC 
TTGAATTGGG CACAGGGGCA TCAGTTTTCT AGAGGGACTA ACTTTCAGTG CTTTGCAACT 
ACTGGTGATG GCTCAATTGT TGTTGGCTCT CTTGATGGCA AAATTAGACT CTACTCGAGC 
AACACTATGA GGCAGGCAAA GACGGCTTTC CCTGGACTTG GTGCACCTGT TACTCATGTG 
GATGCTACAT TCGATGGGAA ATGGATTGTT GGTACAACTG ACACATATTT GATTGTTATC 
TGTACCCTTT TCACTGACAA AAGTGGCAAA ACAAAGACCG GCTTCGAGGG TCGCATGGGA 
AATAAGATTG CCGCACCAAG GTTGCTTAAG TTGAGGCCTC TTGATGCACA TTTAGCTGGA 
TCTGACAACA AGTTCCGCAA TGCTCAGTTT TCTTGGGTCA CGGAGGATGG GAAACAGGAG 
CGTCATGTGG TAGCTACTGT TGGCAAGTTC AGTGTGATAT GGAACTTTCA GCAGGTGAAG 
AATGGATCTC ATGAATGCTA CCATGATCAG GAAGGGCTGA AGAAATGCTA CTGCTACAAG 
ATAGTCCTTC GAAATGAATC TATAGTGGAC AGTCGCTTCA TGAATGACAA CTTTGCAATC 
TCTGGTTCAC CTGAAGCGCC TTTGGTCATT GCAACGCCTA TGAAAGTCAG CTCTTTCAGC 
TTATCCAGCA AGCGATGA

The stop codons will be deleted if pcDNA3.1⁺/C-(K)DYK vector is selected.

PubMed

Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
Nature402(6763)769-77(1999 Dec)
Mayer K,Sch?ller C,Wambutt R,Murphy G,Volckaert G,Pohl T,D?sterh?ft A,Stiekema W,Entian KD,Terryn N,Harris B,Ansorge W,Brandt P,Grivell L,Rieger M,Weichselgartner M,de Simone V,Obermaier B,Mache R,M?ller M,Kreis M,Delseny M,Puigdomenech P,Watson M,Schmidtheini T,Reichert B,Portatelle D,Perez-Alonso M,Boutry M,Bancroft I,Vos P,Hoheisel J,Zimmermann W,Wedler H,Ridley P,Langham SA,McCullagh B,Bilham L,Robben J,Van der Schueren J,Grymonprez B,Chuang YJ,Vandenbussche F,Braeken M,Weltjens I,Voet M,Bastiaens I,Aert R,Defoor E,Weitzenegger T,Bothe G,Ramsperger U,Hilbert H,Braun M,Holzer E,Brandt A,Peters S,van Staveren M,Dirske W,Mooijman P,Klein Lankhorst R,Rose M,Hauf J,K?tter P,Berneiser S,Hempel S,Feldpausch M,Lamberth S,Van den Daele H,De Keyser A,Buysshaert C,Gielen J,Villarroel R,De Clercq R,Van Montagu M,Rogers J,Cronin A,Quail M,Bray-Allen S,Clark L,Doggett J,Hall S,Kay M,Lennard N,McLay K,Mayes R,Pettett A,Rajandream MA,Lyne M,Benes V,Rechmann S,Borkova D,Bl?cker H,Scharfe M,Grimm M,L?hnert TH,Dose S,de Haan M,Maarse A,Sch?fer M,M?ller-Auer S,Gabel C,Fuchs M,Fartmann B,Granderath K,Dauner D,Herzl A,Neumann S,Argiriou A,Vitale D,Liguori R,Piravandi E,Massenet O,Quigley F,Clabauld G,M?ndlein A,Felber R,Schnabl S,Hiller R,Schmidt W,Lecharny A,Aubourg S,Chefdor F,Cooke R,Berger C,Montfort A,Casacuberta E,Gibbons T,Weber N,Vandenbol M,Bargues M,Terol J,Torres A,Perez-Perez A,Purnelle B,Bent E,Johnson S,Tacon D,Jesse T,Heijnen L,Schwarz S,Scholler P,Heber S,Francs P,Bielke C,Frishman D,Haase D,Lemcke K,Mewes HW,Stocker S,Zaccaria P,Bevan M,Wilson RK,de la Bastide M,Habermann K,Parnell L,Dedhia N,Gnoj L,Schutz K,Huang E,Spiegel L,Sehkon M,Murray J,Sheet P,Cordes M,Abu-Threideh J,Stoneking T,Kalicki J,Graves T,Harmon G,Edwards J,Latreille P,Courtney L,Cloud J,Abbott A,Scott K,Johnson D,Minx P,Bentley D,Fulton B,Miller N,Greco T,Kemp K,Kramer J,Fulton L,Mardis E,Dante M,Pepin K,Hillier L,Nelson J,Spieth J,Ryan E,Andrews S,Geisel C,Layman D,Du H,Ali J,Berghoff A,Jones K,Drone K,Cotton M,Joshu C,Antonoiu B,Zidanic M,Strong C,Sun H,Lamar B,Yordan C,Ma P,Zhong J,Preston R,Vil D,Shekher M,Matero A,Shah R,Swaby IK,O'Shaughnessy A,Rodriguez M,Hoffmann J,Till S,Granat S,Shohdy N,Hasegawa A,Hameed A,Lodhi M,Johnson A,Chen E,Marra M,Martienssen R,McCombie WR

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AT4G33400 cDNA ORF clone, Arabidopsis thaliana(thale cress)

Gene

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gRNAs

Related articles in PubMed

Target ORF information:

Target ORF information:

ORF Insert Sequence:

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