Gene Symbol | IRX9 |
Entrez Gene ID | 818285 |
Full Name | Nucleotide-diphospho-sugar transferases superfamily protein |
Synonyms | IRREGULAR XYLEM 9,T2N18.15,T2N18_15 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
ORF » Species Summary » Arabidopsis thaliana » IRX9 cDNA ORF clone
Gene Symbol | IRX9 |
Entrez Gene ID | 818285 |
Full Name | Nucleotide-diphospho-sugar transferases superfamily protein |
Synonyms | IRREGULAR XYLEM 9,T2N18.15,T2N18_15 |
Gene Type | protein-coding |
Organism | Arabidopsis thaliana(thale cress) |
mRNA | Protein | Name |
---|---|---|
NM_129265.3 | NP_181246.1 | Nucleotide-diphospho-sugar transferases superfamily protein |
Arabidopsis thaliana (thale cress) | IRX9 | NP_181246.1 |
Oryza sativa (rice) | Os03g0287800 | NP_001049780.2 |
Oryza sativa (rice) | Os05g0123100 | NP_001054510.1 |
Oryza sativa (rice) | Os07g0694400 | NP_001060738.1 |
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Van Aken S, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC
Nature402(6763)761-8(1999 Dec)
GeneRIFs: Gene References Into Functions What's a GeneRIF?
The putative glycosyltransferases IRX9, IRX14, and IRX10 (or the paralogs IRX9L, IRX14L, and IRX10L) are required for xylan backbone synthesis in Arabidopsis.
Title: Site-directed mutagenesis of IRX9, IRX9L and IRX14 proteins involved in xylan biosynthesis: glycosyltransferase activity is not required for IRX9 function in Arabidopsis.
The enzymatic activities of two Arabidopsis thaliana GT43 members, IRX9 (Irregular Xylem9) and IRX14, were investigated.
Title: Arabidopsis family GT43 members are xylan xylosyltransferases required for the elongation of the xylan backbone.
Double mutations of IRX9 and IRX14 were shown to cause a loss of secondary wall thickening in fibers and a much more severe reduction in glucuronoxylan synthesis.
Title: The Arabidopsis family GT43 glycosyltransferases form two functionally nonredundant groups essential for the elongation of glucuronoxylan backbone.
Results suggest that IRREGULAR XYLEM9 (IRX9) is required for normal glucuronoxylan (GX)elongation and indicate roles for IRX8 and FRA8 in the synthesis of the glycosyl sequence at the GX reducing end.
Title: Arabidopsis irregular xylem8 and irregular xylem9: implications for the complexity of glucuronoxylan biosynthesis.
The following IRX9 gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the IRX9 cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OAb08989 | |
Clone ID Related Accession (Same CDS sequence) | NM_129265.3 | |
Accession Version | NM_129265.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 1056bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-02-13 | |
Organism | Arabidopsis thaliana(thale cress) | |
Product | Nucleotide-diphospho-sugar transferases superfamily protein | |
Comment | Comment: REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). On Sep 12, 2016 this sequence version replaced NM_129265.2. |
1 | ATGGGATCTC TAGAGAGATC AAAGAAGAAA GCTCAAGTAT GGAAGAAAGC TGTGATCCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | NP_181246.1 |
CDS | 147..1202 |
Translation |
Target ORF information:
Target ORF information:
|
NM_129265.3 |
1 | ATGGGATCTC TAGAGAGATC AAAGAAGAAA GCTCAAGTAT GGAAGAAAGC TGTGATCCAT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. |