Gene Symbol | prpf40b |
Entrez Gene ID | 100493450 |
Full Name | pre-mRNA processing factor 40 homolog B |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
ORF » Species Summary » Xenopus tropicalis » prpf40b cDNA ORF clone
Gene Symbol | prpf40b |
Entrez Gene ID | 100493450 |
Full Name | pre-mRNA processing factor 40 homolog B |
Gene Type | protein-coding |
Organism | Xenopus tropicalis(tropical clawed frog) |
mRNA | Protein | Name |
---|---|---|
XM_012957768.2 | XP_012813222.1 | pre-mRNA-processing factor 40 homolog B isoform X3 |
XM_012957770.2 | XP_012813224.1 | pre-mRNA-processing factor 40 homolog B isoform X4 |
XM_018091675.2 | XP_017947164.1 | pre-mRNA-processing factor 40 homolog B isoform X2 |
XM_012957768.3 | XP_012813222.1 | pre-mRNA-processing factor 40 homolog B isoform X4 |
XM_012957766.2 | XP_012813220.1 | pre-mRNA-processing factor 40 homolog B isoform X1 |
XM_012957766.3 | XP_012813220.1 | pre-mRNA-processing factor 40 homolog B isoform X1 |
XM_018091675.1 | XP_017947164.1 | pre-mRNA-processing factor 40 homolog B isoform X2 |
XM_031897142.1 | XP_031753002.1 | pre-mRNA-processing factor 40 homolog B isoform X3 |
XM_012957770.3 | XP_012813224.1 | pre-mRNA-processing factor 40 homolog B isoform X5 |
PRPF40B | XP_001101626.2 | |
Canis lupus familiaris (dog) | PRPF40B | XP_005636926.1 |
Kluyveromyces lactis | KLLA0E18239g | XP_454773.1 |
Bos taurus (cattle) | PRPF40B | XP_002687330.3 |
Rattus norvegicus (Norway rat) | Prpf40b | NP_001128055.1 |
Xenopus tropicalis (tropical clawed frog) | prpf40b | XP_002935163.2 |
Pan troglodytes (chimpanzee) | PRPF40B | XP_001144883.3 |
Drosophila melanogaster (fruit fly) | CG3542 | NP_608738.1 |
Homo sapiens (human) | PRPF40B | NP_001026868.2 |
Mus musculus (house mouse) | Prpf40b | NP_061256.1 |
Anopheles gambiae (African malaria mosquito) | AgaP_AGAP008263 | XP_317209.4 |
Saccharomyces cerevisiae (baker's yeast) | PRP40 | NP_012913.3 |
Eremothecium gossypii | AGOS_ADR159C | NP_984256.1 |
The following prpf40b gene cDNA ORF clone sequences were retrieved from the NCBI Reference Sequence Database (RefSeq). These sequences represent the protein coding region of the prpf40b cDNA ORF which is encoded by the open reading frame (ORF) sequence. ORF sequences can be delivered in our standard vector, pcDNA3.1+/C-(K)DYK or the vector of your choice as an expression/transfection-ready ORF clone. Not the clone you want? Click here to find your clone.
CloneID | OXa35668 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957766.2 , XM_012957766.3 | |
Accession Version | XM_012957766.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2796bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012957766.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813220.1 |
CDS | 39..2834 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957766.2 |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa35670 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957768.2 , XM_012957768.3 | |
Accession Version | XM_012957768.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2745bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012957768.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTTATA CAAAGTCAGC ACCAGACTCA GGAACAGCTC CACCTGGACA GCCTGCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813222.1 |
CDS | 1189..3933 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957768.2 |
1 | ATGCTTTATA CAAAGTCAGC ACCAGACTCA GGAACAGCTC CACCTGGACA GCCTGCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa35671 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957770.2 , XM_012957770.3 | |
Accession Version | XM_012957770.2 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2733bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2016 this sequence version replaced XM_012957770.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGCAC CAGACTCAGG AACAGCTCCA CCTGGACAGC CTGCTCCATT TCCCACGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813224.1 |
CDS | 78..2810 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957770.2 |
1 | ATGTCAGCAC CAGACTCAGG AACAGCTCCA CCTGGACAGC CTGCTCCATT TCCCACGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa35668 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957766.2 , XM_012957766.3 | |
Accession Version | XM_012957766.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2796bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X1 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012957766.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813220.1 |
CDS | 19..2814 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957766.3 |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa35670 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957768.2 , XM_012957768.3 | |
Accession Version | XM_012957768.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2745bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X4 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012957768.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGCTTTATA CAAAGTCAGC ACCAGACTCA GGAACAGCTC CACCTGGACA GCCTGCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813222.1 |
CDS | 1212..3956 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957768.3 |
1 | ATGCTTTATA CAAAGTCAGC ACCAGACTCA GGAACAGCTC CACCTGGACA GCCTGCTCCA |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa35671 | |
Clone ID Related Accession (Same CDS sequence) | XM_012957770.2 , XM_012957770.3 | |
Accession Version | XM_012957770.3 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2733bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X5 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012957770.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGTCAGCAC CAGACTCAGG AACAGCTCCA CCTGGACAGC CTGCTCCATT TCCCACGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_012813224.1 |
CDS | 78..2810 |
Translation |
Target ORF information:
Target ORF information:
|
XM_012957770.3 |
1 | ATGTCAGCAC CAGACTCAGG AACAGCTCCA CCTGGACAGC CTGCTCCATT TCCCACGGCT |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa42827 | |
Clone ID Related Accession (Same CDS sequence) | XM_018091675.2 , XM_018091675.1 | |
Accession Version | XM_018091675.2 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2796bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_018091675.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017947164.1 |
CDS | 20..2815 |
Translation |
Target ORF information:
Target ORF information:
|
XM_018091675.2 |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa42827 | |
Clone ID Related Accession (Same CDS sequence) | XM_018091675.2 , XM_018091675.1 | |
Accession Version | XM_018091675.1 | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2796bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2016-09-07 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X2 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Xenopus tropicalis Annotation Release 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_017947164.1 |
CDS | 40..2835 |
Translation |
Target ORF information:
Target ORF information:
|
XM_018091675.1 |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
CloneID | OXa52643 | |
Clone ID Related Accession (Same CDS sequence) | XM_031897142.1 | |
Accession Version | XM_031897142.1 Latest version! | Documents for ORF clone product in default vector |
Sequence Information | ORF Nucleotide Sequence (Length: 2766bp) Protein sequence SNP |
|
Vector | pcDNA3.1-C-(k)DYK or customized vector | User Manual |
Clone information | Clone Map | MSDS |
Tag on pcDNA3.1+/C-(K)DYK | C terminal DYKDDDDK tags | |
ORF Insert Method | CloneEZ™ Seamless cloning technology | |
Insert Structure | linear | |
Update Date | 2019-12-17 | |
Organism | Xenopus tropicalis(tropical clawed frog) | |
Product | pre-mRNA-processing factor 40 homolog B isoform X3 | |
Comment | Comment: MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030678.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.
RefSeq | XP_031753002.1 |
CDS | 19..2784 |
Translation |
Target ORF information:
Target ORF information:
|
XM_031897142.1 |
1 | ATGGGGAGCG TGGAGTGCCT AGAGGAAACC CATGCAGATA TGGGTCATGA CACATTCTGG |
The stop codons will be deleted if pcDNA3.1+/C-(K)DYK vector is selected.